RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 IGKV5-2P06315 115 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 BPGMP07738 259 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 CD1EP15812 388 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 ZNF708P17019 499 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 VDAC1P21796 283 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 NUDT1P36639 197 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 AKR1C3P42330 323 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 KRTAP10-8P60410 259 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 ZNF763Q0D2J5 394 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 TCP10Q12799 353 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 LY6DQ14210 128 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 C16orf72Q14CZ0 275 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 SHHQ15465 462 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 SURF2Q15527 256 aaPredicted RBP3.28□□□□□ -1.88
VPS8-217ENST00000465213 ZNF239Q16600 458 aaKnown RBP3.28□□□□□ -1.88
VPS8-217ENST00000465213 SCGB1D4Q6XE38 83 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 TEX43Q6ZNM6 134 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 DGAT2L6Q6ZPD8 337 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 NAA40Q86UY6 237 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 ZBTB8OSQ8IWT0 167 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 LRRC18Q8N456 261 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 ZFP41Q8N8Y5 198 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 OR51A2Q8NGJ7 313 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 ABHD3Q8WU67 409 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 CNRIP1Q96F85 164 aaPredicted RBP3.28□□□□□ -1.88
VPS8-217ENST00000465213 RNF185Q96GF1 192 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 SLC35G5Q96KT7 338 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 DNAJC30Q96LL9 226 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 CNBD2Q96M20 576 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 EBF4Q9BQW3 602 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 RTBDNQ9BSG5 229 aaPredicted RBP3.28□□□□□ -1.88
VPS8-217ENST00000465213 MAP1LC3BQ9GZQ8 125 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 SH3BGRL3Q9H299 93 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 WFDC1Q9HC57 220 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 HES4Q9HCC6 221 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 RRAGDQ9NQL2 400 aaPredicted RBP3.28□□□□□ -1.88
VPS8-217ENST00000465213 CISHQ9NSE2 258 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 MED29Q9NX70 200 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 ZNF629Q9UEG4 869 aaPredicted RBP3.28□□□□□ -1.88
VPS8-217ENST00000465213 JPT1Q9UK76 154 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 MOB4Q9Y3A3 225 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 ASB4Q9Y574 426 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 CSAG2Q9Y5P2 127 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 NESP48681 1621 aa3.28□□□□□ -1.88
VPS8-217ENST00000465213 PHF3Q92576 2039 aaKnown RBP3.27□□□□□ -1.89
VPS8-217ENST00000465213 IGHV1OR15-1A0A075B7D0 117 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 IGHV3OR16-10A0A075B7F0 116 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 TRAV8-6A0A0B4J262 113 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 EEF1E1-BLOC1S5C9J1V9 151 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 E7EQ34 232 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 H7C417 338 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 EEF1E1O43324 174 aaKnown RBP3.27□□□□□ -1.89
VPS8-217ENST00000465213 TPST1O60507 370 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 PDCD6O75340 191 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 GCM2O75603 506 aaPredicted RBP3.27□□□□□ -1.89
VPS8-217ENST00000465213 ARL6IP5O75915 188 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 IFNGP01579 166 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 ESDP10768 282 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 SPNP16150 400 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 GGT2P36268 569 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 CTRLP40313 264 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 VDAC2P45880 294 aaPredicted RBP3.27□□□□□ -1.89
VPS8-217ENST00000465213 SLC18A1P54219 525 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 RPS23P62266 143 aaKnown RBP3.27□□□□□ -1.89
VPS8-217ENST00000465213 FKBP3Q00688 224 aaKnown RBP3.27□□□□□ -1.89
VPS8-217ENST00000465213 INCA1Q0VD86 236 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 PMAIP1Q13794 54 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 PAFAH1B3Q15102 231 aaKnown RBP3.27□□□□□ -1.89
VPS8-217ENST00000465213 NSDHLQ15738 373 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 C1orf100Q5SVJ3 147 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 TSPO2Q5TGU0 170 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 UNQ9370/PRO34162Q6UXP9 181 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 C4orf22Q6V702 233 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 ZNF620Q6ZNG0 422 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 H2AFVQ71UI9 128 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 ZNF550Q7Z398 422 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 UBALD2Q8IYN6 164 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 C11orf72Q8NBR9 251 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 OR52L1Q8NGH7 329 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 OR9A2Q8NGT5 310 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 OR4K15Q8NH41 348 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 GRPEL2Q8TAA5 225 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 L3HYPDHQ96EM0 354 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 MRPL48Q96GC5 212 aaKnown RBP3.27□□□□□ -1.89
VPS8-217ENST00000465213 TBX5Q99593 518 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 KLF6Q99612 283 aaPredicted RBP3.27□□□□□ -1.89
VPS8-217ENST00000465213 ULBP3Q9BZM4 244 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 ZSCAN16Q9H4T2 348 aaPredicted RBP3.27□□□□□ -1.89
VPS8-217ENST00000465213 LYRM2Q9NU23 88 aaPredicted RBP3.27□□□□□ -1.89
VPS8-217ENST00000465213 DPM3Q9P2X0 92 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 MTFP1Q9UDX5 166 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 GLS2Q9UI32 602 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 YTHDF2Q9Y5A9 579 aaKnown RBP3.27□□□□□ -1.89
VPS8-217ENST00000465213 WSB1Q9Y6I7 421 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 NPHP4O75161 1426 aaPredicted RBP3.27□□□□□ -1.89
VPS8-217ENST00000465213 SOGA1O94964 1423 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 UHRF1BP1Q6BDS2 1440 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 RLFQ13129 1914 aa3.27□□□□□ -1.89
VPS8-217ENST00000465213 TONSLQ96HA7 1378 aa3.26□□□□□ -1.89
VPS8-217ENST00000465213 AGRNO00468 2067 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms