RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 TMEM108Q6UXF1 575 aa12.32□□□□□ -0.44
COL5A1-205ENST00000464187 MKXQ8IYA7 352 aa12.32□□□□□ -0.44
COL5A1-205ENST00000464187 RNASE6Q93091 150 aaKnown RBP12.32□□□□□ -0.44
COL5A1-205ENST00000464187 PHYHIPLQ96FC7 376 aa12.32□□□□□ -0.44
COL5A1-205ENST00000464187 RCC2Q9P258 522 aaKnown RBP12.32□□□□□ -0.44
COL5A1-205ENST00000464187 MSGN1A6NI15 193 aa12.31□□□□□ -0.44
COL5A1-205ENST00000464187 ATP6V1G2-DDX39BF2Z307 99 aa12.31□□□□□ -0.44
COL5A1-205ENST00000464187 F5H0A9 414 aaPredicted RBP12.31□□□□□ -0.44
COL5A1-205ENST00000464187 TRAPPC2LH3BP13 241 aa12.31□□□□□ -0.44
COL5A1-205ENST00000464187 TEX46H3BTG2 121 aa12.31□□□□□ -0.44
COL5A1-205ENST00000464187 SELEP16581 610 aa12.31□□□□□ -0.44
COL5A1-205ENST00000464187 FABP6P51161 128 aa12.31□□□□□ -0.44
COL5A1-205ENST00000464187 SNTB1Q13884 538 aaKnown RBP12.31□□□□□ -0.44
COL5A1-205ENST00000464187 ZNF718Q3SXZ3 478 aa12.31□□□□□ -0.44
COL5A1-205ENST00000464187 MOB3AQ96BX8 217 aa12.31□□□□□ -0.44
COL5A1-205ENST00000464187 PIK3IP1Q96FE7 263 aa12.31□□□□□ -0.44
COL5A1-205ENST00000464187 HIST1H2AAQ96QV6 131 aa12.31□□□□□ -0.44
COL5A1-205ENST00000464187 NAA60Q9H7X0 242 aa12.31□□□□□ -0.44
COL5A1-205ENST00000464187 KCNJ16Q9NPI9 418 aa12.31□□□□□ -0.44
COL5A1-205ENST00000464187 FZR1Q9UM11 496 aa12.31□□□□□ -0.44
COL5A1-205ENST00000464187 SPEF1Q9Y4P9 236 aa12.31□□□□□ -0.44
COL5A1-205ENST00000464187 MPC1Q9Y5U8 109 aa12.31□□□□□ -0.44
COL5A1-205ENST00000464187 ZFYVE26Q68DK2 2539 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 IQCF6A8MYZ5 107 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 CRYZL1O95825 349 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 PRB1P04280 392 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 CA6P23280 308 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 PTAFRP25105 342 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 GRNP28799 593 aaKnown RBP12.3□□□□□ -0.44
COL5A1-205ENST00000464187 GCH1P30793 250 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 ABCA11PQ4W5N1 156 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 MBNL2Q5VZF2 373 aaKnown RBP12.3□□□□□ -0.44
COL5A1-205ENST00000464187 MRPL24Q96A35 216 aaKnown RBP12.3□□□□□ -0.44
COL5A1-205ENST00000464187 GSKIPQ9P0R6 139 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 CADP27708 2225 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 DIDO1Q9BTC0 2240 aaKnown RBP12.3□□□□□ -0.44
COL5A1-205ENST00000464187 DPRXA6NFQ7 191 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 OR5B21A6NL26 309 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 PRSS44E7EML9 344 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 NAPSAO96009 420 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 FGF2P09038 288 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 ZP3P21754 424 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 AADACP22760 399 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 GLRXP35754 106 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 GLP1RP43220 463 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 UCP3P55916 312 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 S100A10P60903 97 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 NKX6-1P78426 367 aaPredicted RBP12.3□□□□□ -0.44
COL5A1-205ENST00000464187 TMEM187Q14656 261 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 MPV17LQ2QL34 196 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 PHLDA2Q53GA4 152 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 GGNBP1Q5YKI7 109 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 HAGHLQ6PII5 290 aaPredicted RBP12.3□□□□□ -0.44
COL5A1-205ENST00000464187 Q6ZS49 121 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 STOML3Q8TAV4 291 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 GALNT14Q96FL9 552 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 LRRC46Q96FV0 321 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 ZNF488Q96MN9 340 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 LINC00052Q96N35 136 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 NARFLQ9H6Q4 476 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 SLC2A9Q9NRM0 540 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 CYTL1Q9NRR1 136 aa12.3□□□□□ -0.44
COL5A1-205ENST00000464187 PURGQ9UJV8 347 aaKnown RBP12.3□□□□□ -0.44
COL5A1-205ENST00000464187 A8MXK9 166 aa12.29□□□□□ -0.44
COL5A1-205ENST00000464187 B8ZZF3 427 aa12.29□□□□□ -0.44
COL5A1-205ENST00000464187 ABCD4O14678 606 aa12.29□□□□□ -0.44
COL5A1-205ENST00000464187 OR5AC1P0C628 307 aa12.29□□□□□ -0.44
COL5A1-205ENST00000464187 PET100P0DJ07 73 aa12.29□□□□□ -0.44
COL5A1-205ENST00000464187 PRKACAP17612 351 aa12.29□□□□□ -0.44
COL5A1-205ENST00000464187 GNG3P63215 75 aa12.29□□□□□ -0.44
COL5A1-205ENST00000464187 BSPH1Q075Z2 132 aa12.29□□□□□ -0.44
COL5A1-205ENST00000464187 MSMPQ1L6U9 139 aa12.29□□□□□ -0.44
COL5A1-205ENST00000464187 IAH1Q2TAA2 248 aaPredicted RBP12.29□□□□□ -0.44
COL5A1-205ENST00000464187 IGSF11Q5DX21 431 aa12.29□□□□□ -0.44
COL5A1-205ENST00000464187 HSD17B13Q7Z5P4 300 aaPredicted RBP12.29□□□□□ -0.44
COL5A1-205ENST00000464187 SLC38A6Q8IZM9 456 aa12.29□□□□□ -0.44
COL5A1-205ENST00000464187 RTN4IP1Q8WWV3 396 aaPredicted RBP12.29□□□□□ -0.44
COL5A1-205ENST00000464187 AQP10Q96PS8 301 aa12.29□□□□□ -0.44
COL5A1-205ENST00000464187 RSRP1Q9BUV0 290 aa12.29□□□□□ -0.44
COL5A1-205ENST00000464187 BARX1Q9HBU1 254 aaPredicted RBP12.29□□□□□ -0.44
COL5A1-205ENST00000464187 Q9N2K0 584 aa12.29□□□□□ -0.44
COL5A1-205ENST00000464187 NGBQ9NPG2 151 aa12.29□□□□□ -0.44
COL5A1-205ENST00000464187 NDRG3Q9UGV2 375 aa12.29□□□□□ -0.44
COL5A1-205ENST00000464187 SESN1Q9Y6P5 492 aa12.29□□□□□ -0.44
COL5A1-205ENST00000464187 HIVEP3Q5T1R4 2406 aa12.28□□□□□ -0.44
COL5A1-205ENST00000464187 HSPB6O14558 160 aa12.28□□□□□ -0.44
COL5A1-205ENST00000464187 TPD52L2O43399 206 aaKnown RBP12.28□□□□□ -0.44
COL5A1-205ENST00000464187 TIMM8AO60220 97 aaPredicted RBP12.28□□□□□ -0.44
COL5A1-205ENST00000464187 SCO1O75880 301 aa12.28□□□□□ -0.44
COL5A1-205ENST00000464187 KITLGP21583 273 aa12.28□□□□□ -0.44
COL5A1-205ENST00000464187 HERV-K104P61576 105 aa12.28□□□□□ -0.44
COL5A1-205ENST00000464187 SRSF7Q16629 238 aaKnown RBP eCLIP12.28□□□□□ -0.44
COL5A1-205ENST00000464187 SP6Q3SY56 376 aa12.28□□□□□ -0.44
COL5A1-205ENST00000464187 VHLLQ6RSH7 139 aa12.28□□□□□ -0.44
COL5A1-205ENST00000464187 C5orf24Q7Z6I8 188 aa12.28□□□□□ -0.44
COL5A1-205ENST00000464187 ZNF573Q86YE8 665 aa12.28□□□□□ -0.44
COL5A1-205ENST00000464187 BVESQ8NE79 360 aa12.28□□□□□ -0.44
COL5A1-205ENST00000464187 OR8G5Q8NG78 346 aa12.28□□□□□ -0.44
COL5A1-205ENST00000464187 OR11L1Q8NGX0 322 aa12.28□□□□□ -0.44
COL5A1-205ENST00000464187 LINC01560Q8TB33 94 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms