RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 RPUSD1Q9UJJ7 312 aaKnown RBP11.46□□□□□ -0.57
PHACTR4-203ENST00000463428 FLNAP21333 2647 aaKnown RBP11.46□□□□□ -0.58
PHACTR4-203ENST00000463428 TRBV23-1A0A0A0MS06 115 aa11.45□□□□□ -0.58
PHACTR4-203ENST00000463428 TRBV6-6A0A0A6YYG2 114 aa11.45□□□□□ -0.58
PHACTR4-203ENST00000463428 TMEM30CPA0ZSE6 113 aa11.45□□□□□ -0.58
PHACTR4-203ENST00000463428 ODAMA1E959 279 aa11.45□□□□□ -0.58
PHACTR4-203ENST00000463428 FUOMA2VDF0 154 aa11.45□□□□□ -0.58
PHACTR4-203ENST00000463428 SSX5O60225 188 aa11.45□□□□□ -0.58
PHACTR4-203ENST00000463428 S100A5P33763 92 aa11.45□□□□□ -0.58
PHACTR4-203ENST00000463428 ETV6P41212 452 aa11.45□□□□□ -0.58
PHACTR4-203ENST00000463428 RPL31P62899 125 aaKnown RBP11.45□□□□□ -0.58
PHACTR4-203ENST00000463428 MEF2CQ06413 473 aaPredicted RBP11.45□□□□□ -0.58
PHACTR4-203ENST00000463428 MADCAM1Q13477 382 aa11.45□□□□□ -0.58
PHACTR4-203ENST00000463428 CD276Q5ZPR3 534 aa11.45□□□□□ -0.58
PHACTR4-203ENST00000463428 COX4I2Q96KJ9 171 aa11.45□□□□□ -0.58
PHACTR4-203ENST00000463428 CMSS1Q9BQ75 279 aaKnown RBP11.45□□□□□ -0.58
PHACTR4-203ENST00000463428 MMP26Q9NRE1 261 aa11.45□□□□□ -0.58
PHACTR4-203ENST00000463428 MBNL3Q9NUK0 354 aaKnown RBP11.45□□□□□ -0.58
PHACTR4-203ENST00000463428 V9GYH0 126 aa11.45□□□□□ -0.58
PHACTR4-203ENST00000463428 OTOGQ6ZRI0 2925 aa11.45□□□□□ -0.58
PHACTR4-203ENST00000463428 ACANP16112 2415 aa11.45□□□□□ -0.58
PHACTR4-203ENST00000463428 MEIKINA0A087WXM9 373 aa11.44□□□□□ -0.58
PHACTR4-203ENST00000463428 PPIAL4CA0A0B4J2A2 164 aa11.44□□□□□ -0.58
PHACTR4-203ENST00000463428 KIR2DS1A0A191URI9 304 aa11.44□□□□□ -0.58
PHACTR4-203ENST00000463428 B4DSR2 109 aa11.44□□□□□ -0.58
PHACTR4-203ENST00000463428 MSMBP08118 114 aa11.44□□□□□ -0.58
PHACTR4-203ENST00000463428 TALDO1P37837 337 aa11.44□□□□□ -0.58
PHACTR4-203ENST00000463428 ZNF273Q14593 569 aa11.44□□□□□ -0.58
PHACTR4-203ENST00000463428 OR13A1Q8NGR1 328 aa11.44□□□□□ -0.58
PHACTR4-203ENST00000463428 OR4K15Q8NH41 348 aa11.44□□□□□ -0.58
PHACTR4-203ENST00000463428 MSI2Q96DH6 328 aaKnown RBP11.44□□□□□ -0.58
PHACTR4-203ENST00000463428 DMRTB1Q96MA1 342 aa11.44□□□□□ -0.58
PHACTR4-203ENST00000463428 RIMS4Q9H426 269 aaPredicted RBP11.44□□□□□ -0.58
PHACTR4-203ENST00000463428 MRPS7Q9Y2R9 242 aaKnown RBP11.44□□□□□ -0.58
PHACTR4-203ENST00000463428 TEX15Q9BXT5 2789 aa11.44□□□□□ -0.58
PHACTR4-203ENST00000463428 CSPG4Q6UVK1 2322 aa11.44□□□□□ -0.58
PHACTR4-203ENST00000463428 TRAV39A0A0B4J263 110 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 IGHV2-70DA0A0C4DH43 119 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 A0A0G2JMP0 313 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 A0A0X1KG70 313 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 hADV38S2A0JD32 116 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 MEX3AA1L020 520 aaKnown RBP11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 MEIOCA2RUB1 952 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 FABP12A6NFH5 140 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 POM121CA8CG34 1229 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 CD3GP09693 182 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 PPIAL4GP0DN37 164 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 GZMKP49863 264 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 DLX6P56179 175 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 GUCA2AQ02747 115 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 ARFRP1Q13795 201 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 PYHIN1Q6K0P9 492 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 BAIAP2L2Q6UXY1 529 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 C11orf42Q8N5U0 333 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 LINC01356Q8N9X3 169 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 OR4M2Q8NGB6 313 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 NUDCD2Q8WVJ2 157 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 GCDHQ92947 438 aaPredicted RBP11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 LPAR2Q9HBW0 351 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 C12orf4Q9NQ89 552 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 OR6C3Q9NZP0 311 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 LINC00312Q9Y6C7 94 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 SMAD7O15105 426 aaKnown RBP11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 CTDSPLO15194 276 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 RCC1P18754 421 aaPredicted RBP11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 PRSS3P35030 304 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 GNG2P59768 71 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 PITPNAQ00169 270 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 KRTAP1-1Q07627 177 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 ZNF79Q15937 498 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 C5orf24Q7Z6I8 188 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 SNX29P2Q8IUI4 249 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 FAM185AQ8N0U4 392 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 GPX8Q8TED1 209 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 CCDC107Q8WV48 283 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 OCSTAMPQ9BR26 566 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 TMUB1Q9BVT8 246 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 Q9N2K0 584 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 TAS2R3Q9NYW6 316 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 RABL2AQ9UBK7 228 aaPredicted RBP11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 LPAR3Q9UBY5 353 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 RABL2BQ9UNT1 228 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 UBE2J1Q9Y385 318 aaPredicted RBP11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 INSIG2Q9Y5U4 225 aa11.43□□□□□ -0.58
PHACTR4-203ENST00000463428 ZANQ9Y493 2812 aa11.42□□□□□ -0.58
PHACTR4-203ENST00000463428 C15orf65H3BRN8 121 aa11.42□□□□□ -0.58
PHACTR4-203ENST00000463428 ENSAO43768 121 aaKnown RBP11.42□□□□□ -0.58
PHACTR4-203ENST00000463428 LIPFP07098 398 aa11.42□□□□□ -0.58
PHACTR4-203ENST00000463428 FCGR3AP08637 254 aa11.42□□□□□ -0.58
PHACTR4-203ENST00000463428 CCL3L1P16619 93 aa11.42□□□□□ -0.58
PHACTR4-203ENST00000463428 GZMHP20718 246 aa11.42□□□□□ -0.58
PHACTR4-203ENST00000463428 DTYMKP23919 212 aa11.42□□□□□ -0.58
PHACTR4-203ENST00000463428 PTBP1P26599 531 aaKnown RBP eCLIP11.42□□□□□ -0.581e-6■■■■□ 21.4
PHACTR4-203ENST00000463428 IL18Q14116 193 aa11.42□□□□□ -0.58
PHACTR4-203ENST00000463428 SRSF7Q16629 238 aaKnown RBP eCLIP11.42□□□□□ -0.58
PHACTR4-203ENST00000463428 C17orf58Q2M2W7 97 aa11.42□□□□□ -0.58
PHACTR4-203ENST00000463428 MFSD4AQ8N468 514 aa11.42□□□□□ -0.58
PHACTR4-203ENST00000463428 MRGPRDQ8TDS7 321 aa11.42□□□□□ -0.58
PHACTR4-203ENST00000463428 C15orf40Q8WUR7 153 aa11.42□□□□□ -0.58
PHACTR4-203ENST00000463428 LINC00574Q9H8X3 128 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms