RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 PRAMEF6Q5VXH4 476 aa8.6□□□□□ -1.03
MSH5-211ENST00000463144 MBNL2Q5VZF2 373 aaKnown RBP8.6□□□□□ -1.03
MSH5-211ENST00000463144 FAM180AQ6UWF9 173 aa8.6□□□□□ -1.03
MSH5-211ENST00000463144 LIAT1Q6ZQX7 453 aa8.6□□□□□ -1.03
MSH5-211ENST00000463144 ZNF818PQ6ZRF7 136 aa8.6□□□□□ -1.03
MSH5-211ENST00000463144 C22orf34Q6ZV56 151 aa8.6□□□□□ -1.03
MSH5-211ENST00000463144 RELL2Q8NC24 303 aaPredicted RBP8.6□□□□□ -1.03
MSH5-211ENST00000463144 GPHA2Q96T91 129 aa8.6□□□□□ -1.03
MSH5-211ENST00000463144 SUCNR1Q9BXA5 334 aa8.6□□□□□ -1.03
MSH5-211ENST00000463144 CXXC4Q9H2H0 198 aa8.6□□□□□ -1.03
MSH5-211ENST00000463144 TUBG2Q9NRH3 451 aa8.6□□□□□ -1.03
MSH5-211ENST00000463144 TUBD1Q9UJT1 453 aa8.6□□□□□ -1.03
MSH5-211ENST00000463144 A0A1B0GWJ7 208 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 MPPED1O15442 326 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 DIRAS3O95661 229 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 CEBPDP49716 269 aaPredicted RBP8.59□□□□□ -1.03
MSH5-211ENST00000463144 EIF2S3LQ2VIR3 472 aaKnown RBP8.59□□□□□ -1.03
MSH5-211ENST00000463144 TIMM23BQ5SRD1 257 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 ALKBH2Q6NS38 261 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 UNQ6126/PRO20091Q6UXV3 157 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 ZNF497Q6ZNH5 498 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 LRP11Q86VZ4 500 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 GAPTQ8N292 157 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 CISD2Q8N5K1 135 aaKnown RBP8.59□□□□□ -1.03
MSH5-211ENST00000463144 SECTM1Q8WVN6 248 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 CNTNAP3BQ96NU0 1288 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 SYT3Q9BQG1 590 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 ZNF471Q9BX82 626 aaPredicted RBP8.59□□□□□ -1.03
MSH5-211ENST00000463144 REG4Q9BYZ8 158 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 CNTNAP3Q9BZ76 1288 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 TLNRD1Q9H1K6 362 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 CYTL1Q9NRR1 136 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 APC2O95996 2303 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 PHF1O43189 567 aaPredicted RBP8.59□□□□□ -1.03
MSH5-211ENST00000463144 TFF1P04155 84 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 CTXN2P0C2S0 81 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 HLA-DRB3P79483 266 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 FAM74A1Q5RGS3 127 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 SHEQ5VZ18 495 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 WDR82Q6UXN9 313 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 DOLPP1Q86YN1 238 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 OR4A4PQ8NGN8 299 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 ARPC5LQ9BPX5 153 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 SFXN3Q9BWM7 321 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 CCL28Q9NRJ3 127 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 TREM2Q9NZC2 230 aa8.59□□□□□ -1.03
MSH5-211ENST00000463144 CHD3Q12873 2000 aaKnown RBP8.58□□□□□ -1.04
MSH5-211ENST00000463144 C3orf85A0A1B0GTC6 90 aa8.58□□□□□ -1.04
MSH5-211ENST00000463144 A8MXE2 369 aa8.58□□□□□ -1.04
MSH5-211ENST00000463144 F5H0A9 414 aaPredicted RBP8.58□□□□□ -1.04
MSH5-211ENST00000463144 H7C1Q1 480 aa8.58□□□□□ -1.04
MSH5-211ENST00000463144 K7ENP7 123 aa8.58□□□□□ -1.04
MSH5-211ENST00000463144 M0R1B8 84 aa8.58□□□□□ -1.04
MSH5-211ENST00000463144 SH2D1BO14796 132 aa8.58□□□□□ -1.04
MSH5-211ENST00000463144 PSPNO60542 156 aa8.58□□□□□ -1.04
MSH5-211ENST00000463144 IFNA21P01568 189 aa8.58□□□□□ -1.04
MSH5-211ENST00000463144 GCH1P30793 250 aa8.58□□□□□ -1.04
MSH5-211ENST00000463144 S100A10P60903 97 aa8.58□□□□□ -1.04
MSH5-211ENST00000463144 RND3P61587 244 aa8.58□□□□□ -1.04
MSH5-211ENST00000463144 FAM27E3Q08E93 113 aa8.58□□□□□ -1.04
MSH5-211ENST00000463144 AANATQ16613 207 aa8.58□□□□□ -1.04
MSH5-211ENST00000463144 TBC1D26Q86UD7 250 aa8.58□□□□□ -1.04
MSH5-211ENST00000463144 FOXRED2Q8IWF2 684 aa8.58□□□□□ -1.04
MSH5-211ENST00000463144 CCDC71LQ8N9Z2 235 aa8.58□□□□□ -1.04
MSH5-211ENST00000463144 KIRREL1Q96J84 757 aa8.58□□□□□ -1.04
MSH5-211ENST00000463144 AQP10Q96PS8 301 aa8.58□□□□□ -1.04
MSH5-211ENST00000463144 USB1Q9BQ65 265 aaKnown RBP8.58□□□□□ -1.04
MSH5-211ENST00000463144 CABLES2Q9BTV7 478 aa8.58□□□□□ -1.04
MSH5-211ENST00000463144 SLC5A7Q9GZV3 580 aa8.58□□□□□ -1.04
MSH5-211ENST00000463144 UFSP2Q9NUQ7 469 aa8.58□□□□□ -1.04
MSH5-211ENST00000463144 PCDHB10Q9UN67 800 aa8.58□□□□□ -1.04
MSH5-211ENST00000463144 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.57□□□□□ -1.04
MSH5-211ENST00000463144 HSD17B6O14756 317 aa8.57□□□□□ -1.04
MSH5-211ENST00000463144 HAND1O96004 215 aa8.57□□□□□ -1.04
MSH5-211ENST00000463144 LMO1P25800 156 aa8.57□□□□□ -1.04
MSH5-211ENST00000463144 MDH2P40926 338 aaKnown RBP8.57□□□□□ -1.04
MSH5-211ENST00000463144 ID4P47928 161 aa8.57□□□□□ -1.04
MSH5-211ENST00000463144 SPIN3Q5JUX0 258 aa8.57□□□□□ -1.04
MSH5-211ENST00000463144 H1FOOQ8IZA3 346 aaPredicted RBP8.57□□□□□ -1.04
MSH5-211ENST00000463144 LGI3Q8N145 548 aa8.57□□□□□ -1.04
MSH5-211ENST00000463144 OR1A1Q9P1Q5 309 aa8.57□□□□□ -1.04
MSH5-211ENST00000463144 OR14J1Q9UGF5 321 aa8.57□□□□□ -1.04
MSH5-211ENST00000463144 MEMO1Q9Y316 297 aa8.57□□□□□ -1.04
MSH5-211ENST00000463144 A0A0G2JNJ9 132 aa8.57□□□□□ -1.04
MSH5-211ENST00000463144 GPR31O00270 319 aa8.57□□□□□ -1.04
MSH5-211ENST00000463144 MBPP02686 304 aaPredicted RBP8.57□□□□□ -1.04
MSH5-211ENST00000463144 HOXD4P09016 255 aaPredicted RBP8.57□□□□□ -1.04
MSH5-211ENST00000463144 HKR1P10072 659 aa8.57□□□□□ -1.04
MSH5-211ENST00000463144 ZNF250P15622 560 aa8.57□□□□□ -1.04
MSH5-211ENST00000463144 BMP5P22003 454 aa8.57□□□□□ -1.04
MSH5-211ENST00000463144 P2RX3P56373 397 aa8.57□□□□□ -1.04
MSH5-211ENST00000463144 TOR2AQ5JU69 321 aa8.57□□□□□ -1.04
MSH5-211ENST00000463144 ACP7Q6ZNF0 438 aa8.57□□□□□ -1.04
MSH5-211ENST00000463144 C1orf174Q8IYL3 243 aa8.57□□□□□ -1.04
MSH5-211ENST00000463144 FAM185AQ8N0U4 392 aa8.57□□□□□ -1.04
MSH5-211ENST00000463144 ZNF565Q8N9K5 539 aa8.57□□□□□ -1.04
MSH5-211ENST00000463144 OR52M1Q8NGK5 317 aa8.57□□□□□ -1.04
MSH5-211ENST00000463144 UBALD1Q8TB05 177 aa8.57□□□□□ -1.04
MSH5-211ENST00000463144 TMEM222Q9H0R3 208 aa8.57□□□□□ -1.04
MSH5-211ENST00000463144 MBNL3Q9NUK0 354 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms