RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 LYSMD2Q8IV50 215 aa11.88□□□□□ -0.51
COL6A1-202ENST00000463060 GVQW1Q8N7I0 195 aa11.88□□□□□ -0.51
COL6A1-202ENST00000463060 TMEM185AQ8NFB2 350 aa11.88□□□□□ -0.51
COL6A1-202ENST00000463060 NEK7Q8TDX7 302 aa11.88□□□□□ -0.51
COL6A1-202ENST00000463060 FOXC2Q99958 501 aa11.88□□□□□ -0.51
COL6A1-202ENST00000463060 THAP7Q9BT49 309 aaPredicted RBP11.88□□□□□ -0.51
COL6A1-202ENST00000463060 Q9N2K0 584 aa11.88□□□□□ -0.51
COL6A1-202ENST00000463060 C12orf4Q9NQ89 552 aa11.88□□□□□ -0.51
COL6A1-202ENST00000463060 DSCAML1Q8TD84 2053 aa11.88□□□□□ -0.51
COL6A1-202ENST00000463060 AKAP9Q99996 3911 aa11.87□□□□□ -0.51
COL6A1-202ENST00000463060 DOCK11Q5JSL3 2073 aa11.87□□□□□ -0.51
COL6A1-202ENST00000463060 IGKV1D-8A0A087WSZ0 117 aa11.87□□□□□ -0.51
COL6A1-202ENST00000463060 ODAMA1E959 279 aa11.87□□□□□ -0.51
COL6A1-202ENST00000463060 H7C1Q1 480 aa11.87□□□□□ -0.51
COL6A1-202ENST00000463060 GPR37O15354 613 aa11.87□□□□□ -0.51
COL6A1-202ENST00000463060 CBX5P45973 191 aa11.87□□□□□ -0.51
COL6A1-202ENST00000463060 IFITM3Q01628 133 aa11.87□□□□□ -0.51
COL6A1-202ENST00000463060 SSBP1Q04837 148 aaKnown RBP11.87□□□□□ -0.51
COL6A1-202ENST00000463060 C11orf91Q3C1V1 193 aa11.87□□□□□ -0.51
COL6A1-202ENST00000463060 KRBOX4Q5JUW0 171 aa11.87□□□□□ -0.51
COL6A1-202ENST00000463060 Q5PR19 223 aa11.87□□□□□ -0.51
COL6A1-202ENST00000463060 GDPD3Q7L5L3 318 aa11.87□□□□□ -0.51
COL6A1-202ENST00000463060 TRAPPC6BQ86SZ2 158 aa11.87□□□□□ -0.51
COL6A1-202ENST00000463060 TPRX1Q8N7U7 411 aa11.87□□□□□ -0.51
COL6A1-202ENST00000463060 LY6G5BQ8NDX9 201 aa11.87□□□□□ -0.51
COL6A1-202ENST00000463060 OR8B3Q8NGG8 313 aa11.87□□□□□ -0.51
COL6A1-202ENST00000463060 OR4K15Q8NH41 348 aa11.87□□□□□ -0.51
COL6A1-202ENST00000463060 C8orf46Q8TAG6 207 aa11.87□□□□□ -0.51
COL6A1-202ENST00000463060 CORO2AQ92828 525 aa11.87□□□□□ -0.51
COL6A1-202ENST00000463060 OR8B2Q96RD0 313 aa11.87□□□□□ -0.51
COL6A1-202ENST00000463060 CCDC32Q9BV29 185 aa11.87□□□□□ -0.51
COL6A1-202ENST00000463060 ZNF230Q9UIE0 474 aaPredicted RBP11.87□□□□□ -0.51
COL6A1-202ENST00000463060 MAP1AP78559 2803 aaPredicted RBP11.87□□□□□ -0.51
COL6A1-202ENST00000463060 VPS13CQ709C8 3753 aa11.87□□□□□ -0.51
COL6A1-202ENST00000463060 PRRC2AP48634 2157 aaKnown RBP11.86□□□□□ -0.51
COL6A1-202ENST00000463060 FUOMA2VDF0 154 aa11.86□□□□□ -0.51
COL6A1-202ENST00000463060 KIAA1324LA8MWY0 1029 aaPredicted RBP11.86□□□□□ -0.51
COL6A1-202ENST00000463060 RBBP9O75884 186 aa11.86□□□□□ -0.51
COL6A1-202ENST00000463060 IL7P13232 177 aa11.86□□□□□ -0.51
COL6A1-202ENST00000463060 RCC1P18754 421 aaPredicted RBP11.86□□□□□ -0.51
COL6A1-202ENST00000463060 NPY4RP50391 375 aa11.86□□□□□ -0.51
COL6A1-202ENST00000463060 PAX2Q02962 417 aa11.86□□□□□ -0.51
COL6A1-202ENST00000463060 MEF2CQ06413 473 aaPredicted RBP11.86□□□□□ -0.51
COL6A1-202ENST00000463060 NLRC3Q7RTR2 1065 aa11.86□□□□□ -0.51
COL6A1-202ENST00000463060 TCF23Q7RTU1 214 aa11.86□□□□□ -0.51
COL6A1-202ENST00000463060 SNAPC3Q92966 411 aa11.86□□□□□ -0.51
COL6A1-202ENST00000463060 DACT3Q96B18 629 aaPredicted RBP11.86□□□□□ -0.51
COL6A1-202ENST00000463060 C1orf159Q96HA4 380 aa11.86□□□□□ -0.51
COL6A1-202ENST00000463060 DCTN5Q9BTE1 182 aa11.86□□□□□ -0.51
COL6A1-202ENST00000463060 NARFLQ9H6Q4 476 aa11.86□□□□□ -0.51
COL6A1-202ENST00000463060 CLN8Q9UBY8 286 aa11.86□□□□□ -0.51
COL6A1-202ENST00000463060 ZNF107Q9UII5 783 aaPredicted RBP11.86□□□□□ -0.51
COL6A1-202ENST00000463060 PCDHB10Q9UN67 800 aa11.86□□□□□ -0.51
COL6A1-202ENST00000463060 POLR3KQ9Y2Y1 108 aaPredicted RBP11.86□□□□□ -0.51
COL6A1-202ENST00000463060 MEIKINA0A087WXM9 373 aa11.85□□□□□ -0.51
COL6A1-202ENST00000463060 TRAV39A0A0B4J263 110 aa11.85□□□□□ -0.51
COL6A1-202ENST00000463060 MEIS3P1A6NDR6 274 aa11.85□□□□□ -0.51
COL6A1-202ENST00000463060 A8MXK9 166 aa11.85□□□□□ -0.51
COL6A1-202ENST00000463060 NDUFB7P17568 137 aa11.85□□□□□ -0.51
COL6A1-202ENST00000463060 ZFP36P26651 326 aaKnown RBP11.85□□□□□ -0.51
COL6A1-202ENST00000463060 IL2RGP31785 369 aa11.85□□□□□ -0.51
COL6A1-202ENST00000463060 RCVRNP35243 200 aa11.85□□□□□ -0.51
COL6A1-202ENST00000463060 EDDM3AQ14507 147 aa11.85□□□□□ -0.51
COL6A1-202ENST00000463060 RNASE12Q5GAN4 147 aaKnown RBP11.85□□□□□ -0.51
COL6A1-202ENST00000463060 TMEM200BQ69YZ2 307 aa11.85□□□□□ -0.51
COL6A1-202ENST00000463060 C5orf24Q7Z6I8 188 aa11.85□□□□□ -0.51
COL6A1-202ENST00000463060 OR13A1Q8NGR1 328 aa11.85□□□□□ -0.51
COL6A1-202ENST00000463060 MAFIPQ8WZ33 124 aa11.85□□□□□ -0.51
COL6A1-202ENST00000463060 ST6GALNAC5Q9BVH7 336 aa11.85□□□□□ -0.51
COL6A1-202ENST00000463060 LINC00574Q9H8X3 128 aa11.85□□□□□ -0.51
COL6A1-202ENST00000463060 C19orf12Q9NSK7 152 aa11.85□□□□□ -0.51
COL6A1-202ENST00000463060 ING3Q9NXR8 418 aa11.85□□□□□ -0.51
COL6A1-202ENST00000463060 MED13LQ71F56 2210 aa11.84□□□□□ -0.51
COL6A1-202ENST00000463060 KIAA2026Q5HYC2 2103 aa11.84□□□□□ -0.51
COL6A1-202ENST00000463060 TRBV23-1A0A0A0MS06 115 aa11.84□□□□□ -0.51
COL6A1-202ENST00000463060 ANKRD20A5PA0PJZ0 165 aa11.84□□□□□ -0.51
COL6A1-202ENST00000463060 TRDCB7Z8K6 153 aa11.84□□□□□ -0.51
COL6A1-202ENST00000463060 C22orf46C9J442 243 aa11.84□□□□□ -0.51
COL6A1-202ENST00000463060 C15orf65H3BRN8 121 aa11.84□□□□□ -0.51
COL6A1-202ENST00000463060 PHF1O43189 567 aaPredicted RBP11.84□□□□□ -0.51
COL6A1-202ENST00000463060 UPK1BO75841 260 aa11.84□□□□□ -0.51
COL6A1-202ENST00000463060 GZMHP20718 246 aa11.84□□□□□ -0.51
COL6A1-202ENST00000463060 USF1P22415 310 aaPredicted RBP11.84□□□□□ -0.51
COL6A1-202ENST00000463060 GDNFP39905 211 aa11.84□□□□□ -0.51
COL6A1-202ENST00000463060 EDDM3BP56851 147 aa11.84□□□□□ -0.51
COL6A1-202ENST00000463060 RPL31P62899 125 aaKnown RBP11.84□□□□□ -0.51
COL6A1-202ENST00000463060 MRPS15P82914 257 aaKnown RBP11.84□□□□□ -0.51
COL6A1-202ENST00000463060 LOXL1Q08397 574 aaPredicted RBP11.84□□□□□ -0.51
COL6A1-202ENST00000463060 KLF9Q13886 244 aaPredicted RBP11.84□□□□□ -0.51
COL6A1-202ENST00000463060 HMGN3Q15651 99 aa11.84□□□□□ -0.51
COL6A1-202ENST00000463060 BTN2A1Q7KYR7 527 aa11.84□□□□□ -0.51
COL6A1-202ENST00000463060 MOB1BQ7L9L4 216 aa11.84□□□□□ -0.51
COL6A1-202ENST00000463060 ZNF554Q86TJ5 538 aa11.84□□□□□ -0.51
COL6A1-202ENST00000463060 CCDC107Q8WV48 283 aa11.84□□□□□ -0.51
COL6A1-202ENST00000463060 BORCS5Q969J3 196 aa11.84□□□□□ -0.51
COL6A1-202ENST00000463060 SSBP3Q9BWW4 388 aaPredicted RBP11.84□□□□□ -0.51
COL6A1-202ENST00000463060 CHMP1AQ9HD42 196 aaPredicted RBP11.84□□□□□ -0.51
COL6A1-202ENST00000463060 OR6C3Q9NZP0 311 aa11.84□□□□□ -0.51
COL6A1-202ENST00000463060 RPUSD1Q9UJJ7 312 aaKnown RBP11.84□□□□□ -0.51
COL6A1-202ENST00000463060 TRAPPC2LQ9UL33 140 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms