RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 SGK3Q96BR1 496 aa2.04□□□□□ -2.08
CD46-210ENST00000462968 REEP6Q96HR9 211 aa2.04□□□□□ -2.08
CD46-210ENST00000462968 SNX22Q96L94 193 aa2.04□□□□□ -2.08
CD46-210ENST00000462968 ZNF570Q96NI8 536 aa2.04□□□□□ -2.08
CD46-210ENST00000462968 FUT8Q9BYC5 575 aa2.04□□□□□ -2.08
CD46-210ENST00000462968 FGF23Q9GZV9 251 aaPredicted RBP2.04□□□□□ -2.08
CD46-210ENST00000462968 NUAK2Q9H093 628 aa2.04□□□□□ -2.08
CD46-210ENST00000462968 RGCCQ9H4X1 137 aa2.04□□□□□ -2.08
CD46-210ENST00000462968 RNF167Q9H6Y7 350 aa2.04□□□□□ -2.08
CD46-210ENST00000462968 VIPAS39Q9H9C1 493 aa2.04□□□□□ -2.08
CD46-210ENST00000462968 NMNAT1Q9HAN9 279 aaPredicted RBP2.04□□□□□ -2.08
CD46-210ENST00000462968 PARP11Q9NR21 331 aa2.04□□□□□ -2.08
CD46-210ENST00000462968 TAS2R3Q9NYW6 316 aa2.04□□□□□ -2.08
CD46-210ENST00000462968 TECRQ9NZ01 308 aaKnown RBP2.04□□□□□ -2.08
CD46-210ENST00000462968 MGAT4CQ9UBM8 478 aa2.04□□□□□ -2.08
CD46-210ENST00000462968 CYB5R1Q9UHQ9 305 aa2.04□□□□□ -2.08
CD46-210ENST00000462968 EMCNQ9ULC0 261 aa2.04□□□□□ -2.08
CD46-210ENST00000462968 SLC7A11Q9UPY5 501 aa2.04□□□□□ -2.08
CD46-210ENST00000462968 FOXA2Q9Y261 457 aaPredicted RBP2.04□□□□□ -2.08
CD46-210ENST00000462968 PPP2R2CQ9Y2T4 447 aa2.04□□□□□ -2.08
CD46-210ENST00000462968 KLHDC2Q9Y2U9 406 aa2.04□□□□□ -2.08
CD46-210ENST00000462968 MED31Q9Y3C7 131 aa2.04□□□□□ -2.08
CD46-210ENST00000462968 ADAM18Q9Y3Q7 739 aa2.04□□□□□ -2.08
CD46-210ENST00000462968 N6AMT1Q9Y5N5 214 aa2.04□□□□□ -2.08
CD46-210ENST00000462968 PKHD1L1Q86WI1 4243 aa2.04□□□□□ -2.08
CD46-210ENST00000462968 DEFB131BA0A096LNP1 70 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 IGHV7-81A0A0B4J1V7 117 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 IGHV3-72A0A0B4J1Y9 119 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 A0A0B4J203 849 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 IGHV1-3A0A0C4DH29 117 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 OR5B21A6NL26 309 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 HSD17B6O14756 317 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 DEFB4AO15263 64 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 PLIN3O60664 434 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 HLA-DRB1P01911 266 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 GAPDHP04406 335 aaKnown RBP2.03□□□□□ -2.08
CD46-210ENST00000462968 IL6P05231 212 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 CHRNGP07510 517 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 CD14P08571 375 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 SCTP09683 121 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 SLC2A1P11166 492 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 SLC2A2P11168 524 aaPredicted RBP2.03□□□□□ -2.08
CD46-210ENST00000462968 CD1BP29016 333 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 ERP29P30040 261 aaKnown RBP2.03□□□□□ -2.08
CD46-210ENST00000462968 BLVRBP30043 206 aaPredicted RBP2.03□□□□□ -2.08
CD46-210ENST00000462968 PTGFRP43088 359 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 PRKXP51817 358 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 F2RL1P55085 397 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 FAM3BP58499 235 aaPredicted RBP2.03□□□□□ -2.08
CD46-210ENST00000462968 TPPP2P59282 170 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 TMEM267Q0VDI3 215 aaPredicted RBP2.03□□□□□ -2.08
CD46-210ENST00000462968 ZNF816Q0VGE8 651 aaPredicted RBP2.03□□□□□ -2.08
CD46-210ENST00000462968 KRR1Q13601 381 aaKnown RBP2.03□□□□□ -2.08
CD46-210ENST00000462968 GRK1Q15835 563 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 DUSP7Q16829 419 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 RPEL1Q2QD12 228 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 CEACAM21Q3KPI0 293 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 KLHL12Q53G59 568 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 SLX4IPQ5VYV7 408 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 FAHD1Q6P587 224 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 ASCL4Q6XD76 172 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 FAM122BQ7Z309 247 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 KCTD20Q7Z5Y7 419 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 ADCK1Q86TW2 530 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 OAFQ86UD1 273 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 RBM45Q8IUH3 476 aaKnown RBP2.03□□□□□ -2.08
CD46-210ENST00000462968 ZDHHC21Q8IVQ6 265 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 YIPF7Q8N8F6 280 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 CCDC63Q8NA47 563 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 SMYD1Q8NB12 490 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 FAM156AQ8NDB6 213 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 OR5A2Q8NGI9 324 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 OR13A1Q8NGR1 328 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 OR11H2Q8NH07 326 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 AGR3Q8TD06 166 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 CASTOR1Q8WTX7 329 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 CORO2AQ92828 525 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 VPS33AQ96AX1 596 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 BPIFA2Q96DR5 249 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 PKNOX2Q96KN3 472 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 Q96M85 177 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 ZNF488Q96MN9 340 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 ZIM3Q96PE6 472 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 MS4A10Q96PG2 267 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 SPACA5Q96QH8 159 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 MBOAT4Q96T53 435 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 COPS4Q9BT78 406 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 NSRP1Q9H0G5 558 aaKnown RBP2.03□□□□□ -2.08
CD46-210ENST00000462968 CST11Q9H112 138 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 MAP6D1Q9H9H5 199 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 HES4Q9HCC6 221 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 KRT84Q9NSB2 600 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 NINJ2Q9NZG7 142 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 CNOT2Q9NZN8 540 aaKnown RBP2.03□□□□□ -2.08
CD46-210ENST00000462968 CRCT1Q9UGL9 99 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 RNF150Q9ULK6 438 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 SNX12Q9UMY4 172 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 POLDIP2Q9Y2S7 368 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 TNCP24821 2201 aa2.03□□□□□ -2.08
CD46-210ENST00000462968 FAT3Q8TDW7 4589 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms