RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 FGF16O43320 207 aa13.86□□□□□ -0.19
SMC4-204ENST00000462787 MT-ND6P03923 174 aa13.86□□□□□ -0.19
SMC4-204ENST00000462787 HIST3H3Q16695 136 aa13.86□□□□□ -0.19
SMC4-204ENST00000462787 AUP1Q9Y679 476 aa13.86□□□□□ -0.19
SMC4-204ENST00000462787 BMP5P22003 454 aa13.86□□□□□ -0.19
SMC4-204ENST00000462787 SLC7A10Q9NS82 523 aa13.86□□□□□ -0.19
SMC4-204ENST00000462787 A0A087WWC5 75 aa13.85□□□□□ -0.19
SMC4-204ENST00000462787 KLRC4-KLRK1H3BQV0 150 aa13.85□□□□□ -0.19
SMC4-204ENST00000462787 ZP4Q12836 540 aa13.85□□□□□ -0.19
SMC4-204ENST00000462787 TGIF1Q15583 401 aa13.85□□□□□ -0.19
SMC4-204ENST00000462787 TXNDC17Q9BRA2 123 aa13.85□□□□□ -0.19
SMC4-204ENST00000462787 GINS3Q9BRX5 216 aa13.85□□□□□ -0.19
SMC4-204ENST00000462787 HRKO00198 91 aa13.85□□□□□ -0.19
SMC4-204ENST00000462787 PLPPR5Q32ZL2 321 aa13.85□□□□□ -0.19
SMC4-204ENST00000462787 LEMD1Q68G75 181 aa13.85□□□□□ -0.19
SMC4-204ENST00000462787 IGKV1-8A0A0C4DH67 115 aa13.85□□□□□ -0.19
SMC4-204ENST00000462787 A6NDN8 102 aa13.85□□□□□ -0.19
SMC4-204ENST00000462787 ZNF124Q15973 351 aa13.85□□□□□ -0.19
SMC4-204ENST00000462787 ZNF506Q5JVG8 444 aa13.85□□□□□ -0.19
SMC4-204ENST00000462787 TMEM222Q9H0R3 208 aa13.85□□□□□ -0.19
SMC4-204ENST00000462787 ZNF665Q9H7R5 613 aa13.85□□□□□ -0.19
SMC4-204ENST00000462787 ZNF205O95201 554 aa13.85□□□□□ -0.19
SMC4-204ENST00000462787 CXCL12P48061 93 aa13.85□□□□□ -0.19
SMC4-204ENST00000462787 HDHD3Q9BSH5 251 aaPredicted RBP13.85□□□□□ -0.19
SMC4-204ENST00000462787 IER2Q9BTL4 223 aa13.85□□□□□ -0.19
SMC4-204ENST00000462787 FAM60AQ9NP50 221 aa13.85□□□□□ -0.19
SMC4-204ENST00000462787 OR2W1Q9Y3N9 320 aa13.85□□□□□ -0.19
SMC4-204ENST00000462787 OR5B21A6NL26 309 aa13.84□□□□□ -0.19
SMC4-204ENST00000462787 FAM157BP0CG42 384 aa13.84□□□□□ -0.19
SMC4-204ENST00000462787 PEBP1P30086 187 aaKnown RBP13.84□□□□□ -0.19
SMC4-204ENST00000462787 RPL36A-HNRNPH2H7BZ11 118 aa13.84□□□□□ -0.19
SMC4-204ENST00000462787 HIST1H1BP16401 226 aaKnown RBP13.84□□□□□ -0.19
SMC4-204ENST00000462787 RPS11P62280 158 aaKnown RBP eCLIP13.84□□□□□ -0.198e-17■■■■■ 578.9
SMC4-204ENST00000462787 TRAT1Q6PIZ9 186 aa13.84□□□□□ -0.19
SMC4-204ENST00000462787 TMEM52Q8NDY8 209 aa13.84□□□□□ -0.19
SMC4-204ENST00000462787 TECRQ9NZ01 308 aaKnown RBP13.84□□□□□ -0.19
SMC4-204ENST00000462787 CXorf1O96002 111 aa13.84□□□□□ -0.19
SMC4-204ENST00000462787 TMEM204Q9BSN7 226 aa13.84□□□□□ -0.19
SMC4-204ENST00000462787 LRFN3Q9BTN0 628 aa13.84□□□□□ -0.19
SMC4-204ENST00000462787 LRRC61Q9BV99 259 aa13.84□□□□□ -0.19
SMC4-204ENST00000462787 OR2D2Q9H210 308 aa13.84□□□□□ -0.19
SMC4-204ENST00000462787 ZNFX1Q9P2E3 1918 aaKnown RBP13.84□□□□□ -0.19
SMC4-204ENST00000462787 MSGN1A6NI15 193 aa13.84□□□□□ -0.19
SMC4-204ENST00000462787 OR10G3Q8NGC4 313 aa13.84□□□□□ -0.19
SMC4-204ENST00000462787 RNF2Q99496 336 aa13.84□□□□□ -0.19
SMC4-204ENST00000462787 COA4Q9NYJ1 87 aa13.84□□□□□ -0.19
SMC4-204ENST00000462787 ZDHHC8Q9ULC8 765 aa13.84□□□□□ -0.19
SMC4-204ENST00000462787 IGLV1-36A0A0B4J1U3 117 aa13.83□□□□□ -0.19
SMC4-204ENST00000462787 CA11O75493 328 aa13.83□□□□□ -0.19
SMC4-204ENST00000462787 NGFRP08138 427 aa13.83□□□□□ -0.19
SMC4-204ENST00000462787 KIR2DS2P43631 304 aa13.83□□□□□ -0.19
SMC4-204ENST00000462787 RPL24P83731 157 aaKnown RBP13.83□□□□□ -0.19
SMC4-204ENST00000462787 PMCHL1Q16048 86 aa13.83□□□□□ -0.19
SMC4-204ENST00000462787 SPATA45Q537H7 98 aa13.83□□□□□ -0.19
SMC4-204ENST00000462787 OR5D13Q8NGL4 314 aa13.83□□□□□ -0.19
SMC4-204ENST00000462787 MAP1LC3CQ9BXW4 147 aa13.83□□□□□ -0.19
SMC4-204ENST00000462787 WASHC3Q9Y3C0 194 aa13.83□□□□□ -0.19
SMC4-204ENST00000462787 F8VVB4 439 aa13.83□□□□□ -0.2
SMC4-204ENST00000462787 F8VWA3 439 aa13.83□□□□□ -0.2
SMC4-204ENST00000462787 LAMTOR5O43504 91 aa13.83□□□□□ -0.2
SMC4-204ENST00000462787 MELTFP08582 738 aa13.83□□□□□ -0.2
SMC4-204ENST00000462787 OR5AL1P0C617 328 aa13.83□□□□□ -0.2
SMC4-204ENST00000462787 SH3BGRL3Q9H299 93 aa13.83□□□□□ -0.2
SMC4-204ENST00000462787 C5orf52A6NGY3 159 aa13.83□□□□□ -0.2
SMC4-204ENST00000462787 DEFA4P12838 97 aa13.83□□□□□ -0.2
SMC4-204ENST00000462787 GLB1P16278 677 aa13.83□□□□□ -0.2
SMC4-204ENST00000462787 VHLLQ6RSH7 139 aa13.83□□□□□ -0.2
SMC4-204ENST00000462787 TMEM251Q8N6I4 163 aa13.83□□□□□ -0.2
SMC4-204ENST00000462787 PRSS3P2Q8NHM4 247 aa13.83□□□□□ -0.2
SMC4-204ENST00000462787 BMPR1BO00238 502 aa13.83□□□□□ -0.2
SMC4-204ENST00000462787 FCGR3BO75015 233 aa13.83□□□□□ -0.2
SMC4-204ENST00000462787 APCSP02743 223 aa13.83□□□□□ -0.2
SMC4-204ENST00000462787 HTR1DP28221 377 aa13.83□□□□□ -0.2
SMC4-204ENST00000462787 CAMPP49913 170 aa13.83□□□□□ -0.2
SMC4-204ENST00000462787 WDFY1Q8IWB7 410 aa13.83□□□□□ -0.2
SMC4-204ENST00000462787 UBALD1Q8TB05 177 aa13.83□□□□□ -0.2
SMC4-204ENST00000462787 MRGPRFQ96AM1 343 aa13.83□□□□□ -0.2
SMC4-204ENST00000462787 PARD6GQ9BYG4 376 aaPredicted RBP13.83□□□□□ -0.2
SMC4-204ENST00000462787 CCDC88CQ9P219 2028 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 ZNF207O43670 478 aaKnown RBP13.82□□□□□ -0.2
SMC4-204ENST00000462787 EIF3IQ13347 325 aaKnown RBP13.82□□□□□ -0.2
SMC4-204ENST00000462787 ZNF343Q6P1L6 599 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 OR4A4PQ8NGN8 299 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 IGHV3-64DA0A0J9YX35 117 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 A0A0U1RQV5 110 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 LINC01387J3KSC0 135 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 FHITP49789 147 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 TCL1AP56279 114 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 FZD5Q13467 585 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 ACSM6Q6P461 480 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 VWA1Q6PCB0 445 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 ZBTB34Q8NCN2 500 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 TM4SF19Q96DZ7 209 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 DTX4Q9Y2E6 619 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 LRRC30A6NM36 301 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 TMEM14DPA8MWL7 114 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 SRSF10O75494 262 aaKnown RBP13.82□□□□□ -0.2
SMC4-204ENST00000462787 CRYAAP02489 173 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 THY1P04216 161 aa13.82□□□□□ -0.2
SMC4-204ENST00000462787 ARL16Q0P5N6 197 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms