RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 CITED2Q99967 270 aaPredicted RBP11.17□□□□□ -0.62
USP4-206ENST00000461553 DPCDQ9BVM2 203 aaPredicted RBP11.17□□□□□ -0.62
USP4-206ENST00000461553 BABAM2Q9NXR7 383 aa11.17□□□□□ -0.62
USP4-206ENST00000461553 IDI2-AS1Q9NZ38 188 aa11.17□□□□□ -0.62
USP4-206ENST00000461553 ING4Q9UNL4 249 aa11.17□□□□□ -0.62
USP4-206ENST00000461553 MYL12BO14950 172 aa11.16□□□□□ -0.62
USP4-206ENST00000461553 OGG1O15527 345 aa11.16□□□□□ -0.62
USP4-206ENST00000461553 XPNPEP2O43895 674 aa11.16□□□□□ -0.62
USP4-206ENST00000461553 ZNF780AO75290 641 aaPredicted RBP11.16□□□□□ -0.62
USP4-206ENST00000461553 LALBAP00709 142 aa11.16□□□□□ -0.62
USP4-206ENST00000461553 FSTP19883 344 aa11.16□□□□□ -0.62
USP4-206ENST00000461553 SSTR5P35346 364 aa11.16□□□□□ -0.62
USP4-206ENST00000461553 GNG10P50151 68 aa11.16□□□□□ -0.62
USP4-206ENST00000461553 EMX1Q04741 257 aaPredicted RBP11.16□□□□□ -0.62
USP4-206ENST00000461553 LTC4SQ16873 150 aa11.16□□□□□ -0.62
USP4-206ENST00000461553 MPV17LQ2QL34 196 aa11.16□□□□□ -0.62
USP4-206ENST00000461553 Q499Y3 187 aa11.16□□□□□ -0.62
USP4-206ENST00000461553 ABCA11PQ4W5N1 156 aa11.16□□□□□ -0.62
USP4-206ENST00000461553 DMKNQ6E0U4 476 aaPredicted RBP11.16□□□□□ -0.62
USP4-206ENST00000461553 ASCL4Q6XD76 172 aa11.16□□□□□ -0.62
USP4-206ENST00000461553 Q6ZS46 218 aa11.16□□□□□ -0.62
USP4-206ENST00000461553 C8orf59Q8N0T1 100 aaPredicted RBP11.16□□□□□ -0.62
USP4-206ENST00000461553 ZFP41Q8N8Y5 198 aa11.16□□□□□ -0.62
USP4-206ENST00000461553 SUMF2Q8NBJ7 301 aa11.16□□□□□ -0.62
USP4-206ENST00000461553 Q8NFD4 153 aa11.16□□□□□ -0.62
USP4-206ENST00000461553 NEK7Q8TDX7 302 aa11.16□□□□□ -0.62
USP4-206ENST00000461553 WIPF2Q8TF74 440 aaPredicted RBP11.16□□□□□ -0.62
USP4-206ENST00000461553 GHSRQ92847 366 aa11.16□□□□□ -0.62
USP4-206ENST00000461553 R3HDM4Q96D70 268 aa11.16□□□□□ -0.62
USP4-206ENST00000461553 RBM14Q96PK6 669 aaKnown RBP11.16□□□□□ -0.62
USP4-206ENST00000461553 ZNF184Q99676 751 aaPredicted RBP11.16□□□□□ -0.62
USP4-206ENST00000461553 IFT22Q9H7X7 185 aa11.16□□□□□ -0.62
USP4-206ENST00000461553 CLEC2DQ9UHP7 191 aa11.16□□□□□ -0.62
USP4-206ENST00000461553 SIRT4Q9Y6E7 314 aaPredicted RBP11.16□□□□□ -0.62
USP4-206ENST00000461553 HSPE1-MOB4S4R3N1 261 aa11.16□□□□□ -0.62
USP4-206ENST00000461553 TRBV5-5A0A0J9YX44 114 aa11.15□□□□□ -0.62
USP4-206ENST00000461553 TMEM30CPA0ZSE6 113 aa11.15□□□□□ -0.62
USP4-206ENST00000461553 EFCAB10A6NFE3 127 aa11.15□□□□□ -0.62
USP4-206ENST00000461553 G3V4G9 280 aa11.15□□□□□ -0.62
USP4-206ENST00000461553 J3QR06 171 aa11.15□□□□□ -0.62
USP4-206ENST00000461553 M0QZK8 103 aa11.15□□□□□ -0.62
USP4-206ENST00000461553 GEMIN2O14893 280 aaKnown RBP11.15□□□□□ -0.62
USP4-206ENST00000461553 CAPGP40121 348 aa11.15□□□□□ -0.62
USP4-206ENST00000461553 MADCAM1Q13477 382 aa11.15□□□□□ -0.62
USP4-206ENST00000461553 SLC22A6Q4U2R8 563 aa11.15□□□□□ -0.62
USP4-206ENST00000461553 ATAD3CQ5T2N8 411 aa11.15□□□□□ -0.62
USP4-206ENST00000461553 OR10A7Q8NGE5 316 aa11.15□□□□□ -0.62
USP4-206ENST00000461553 ORAI1Q96D31 301 aa11.15□□□□□ -0.62
USP4-206ENST00000461553 PGLYRP3Q96LB9 341 aa11.15□□□□□ -0.62
USP4-206ENST00000461553 OCSTAMPQ9BR26 566 aa11.15□□□□□ -0.62
USP4-206ENST00000461553 VCXQ9H320 206 aa11.15□□□□□ -0.62
USP4-206ENST00000461553 CNOT2Q9NZN8 540 aaKnown RBP11.15□□□□□ -0.62
USP4-206ENST00000461553 MOB4Q9Y3A3 225 aa11.15□□□□□ -0.62
USP4-206ENST00000461553 PNMA8CA0A1B0GUJ8 204 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 MAGEA13PA6NCF6 341 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 NPIPB11E5RHQ5 1161 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 LY6LH3BQJ8 138 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 IGHV3-7P01780 117 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 LPLP06858 475 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 FAM106CPP0CH98 169 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 CGB3P0DN86 165 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 CGB7P0DN87 165 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 GTF2F2P13984 249 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 IGFBP3P17936 291 aaPredicted RBP11.14□□□□□ -0.63
USP4-206ENST00000461553 ADARB1P78563 741 aaKnown RBP11.14□□□□□ -0.63
USP4-206ENST00000461553 ST3GAL4Q11206 333 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 GPR176Q14439 515 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 BEAN1Q3B7T3 259 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 C9orf152Q5JTZ5 239 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 UTF1Q5T230 341 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 SAMD5Q5TGI4 173 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 AHSA2Q719I0 299 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 JAGN1Q8N5M9 183 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 OR5AU1Q8NGC0 362 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 OR4X2Q8NGF9 303 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 OR10X1Q8NGY0 326 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 OR56B4Q8NH76 319 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 GGHQ92820 318 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 LEAP2Q969E1 77 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 OR14A2Q96R54 314 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 LINC00574Q9H8X3 128 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 PSG11Q9UQ72 335 aa11.14□□□□□ -0.63
USP4-206ENST00000461553 A0A1W2PRX2 142 aa11.13□□□□□ -0.63
USP4-206ENST00000461553 AIPO00170 330 aa11.13□□□□□ -0.63
USP4-206ENST00000461553 SNRNP70P08621 437 aaKnown RBP11.13□□□□□ -0.63
USP4-206ENST00000461553 PF4V1P10720 104 aa11.13□□□□□ -0.63
USP4-206ENST00000461553 RAB7AP51149 207 aa11.13□□□□□ -0.63
USP4-206ENST00000461553 HES1Q14469 280 aa11.13□□□□□ -0.63
USP4-206ENST00000461553 FBLN7Q53RD9 439 aa11.13□□□□□ -0.63
USP4-206ENST00000461553 KHDC1LQ5JSQ8 128 aa11.13□□□□□ -0.63
USP4-206ENST00000461553 AWAT2Q6E213 333 aa11.13□□□□□ -0.63
USP4-206ENST00000461553 CENPVQ7Z7K6 275 aaPredicted RBP11.13□□□□□ -0.63
USP4-206ENST00000461553 OR8H3Q8N146 312 aa11.13□□□□□ -0.63
USP4-206ENST00000461553 STX19Q8N4C7 294 aa11.13□□□□□ -0.63
USP4-206ENST00000461553 RFESDQ8TAC1 157 aa11.13□□□□□ -0.63
USP4-206ENST00000461553 THRSPQ92748 146 aa11.13□□□□□ -0.63
USP4-206ENST00000461553 MUL1Q969V5 352 aa11.13□□□□□ -0.63
USP4-206ENST00000461553 SPACA1Q9HBV2 294 aa11.13□□□□□ -0.63
USP4-206ENST00000461553 ZNF581Q9P0T4 197 aa11.13□□□□□ -0.63
USP4-206ENST00000461553 MRPS28Q9Y2Q9 187 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms