RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 HNF1AP20823 631 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 MPZP25189 248 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 ZNF880Q6PDB4 577 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 DNM1P46Q6ZS02 220 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 H2BFWTQ7Z2G1 175 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 APOBEC3DQ96AK3 386 aaPredicted RBP12.54□□□□□ -0.4
NCL-207ENST00000461347 POM121Q96HA1 1249 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 SPSB2Q99619 263 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 RSG1Q9BU20 258 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 GPR61Q9BZJ8 451 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 TMEM38BQ9NVV0 291 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 SPTA1P02549 2419 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 C17orf112F2Z3M2 114 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 TGOLN2O43493 480 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 MBP02144 154 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 SCTP09683 121 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 FAM157CP0CG43 387 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 RBM11P57052 281 aaKnown RBP12.54□□□□□ -0.4
NCL-207ENST00000461347 TRIM61Q5EBN2 209 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 KIAA2026Q5HYC2 2103 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 RNF166Q96A37 237 aaPredicted RBP12.54□□□□□ -0.4
NCL-207ENST00000461347 R4GN57 208 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 BPTFQ12830 3046 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 LRP5LA4QPB2 252 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 COLCA2A8K830 154 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 LIFP15018 202 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 CASP6P55212 293 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 ERVS71-1P61550 626 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 HLA-BQ31612 363 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 ZNF705AQ6ZN79 300 aaPredicted RBP12.54□□□□□ -0.4
NCL-207ENST00000461347 PLPPR2Q96GM1 343 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 TECTBQ96PL2 329 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 TUBG2Q9NRH3 451 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 TMEM100Q9NV29 134 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 FBLN5Q9UBX5 448 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 SYNGR2O43760 224 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 CCL4P13236 92 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 PCP4P48539 62 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 IZUMO4Q1ZYL8 232 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 POC1BQ8TC44 478 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 MRGPRFQ96AM1 343 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 MOB3AQ96BX8 217 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 TP53RKQ96S44 253 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 OR2H1Q9GZK4 316 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 ZNF665Q9H7R5 613 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 SERTAD4Q9NUC0 356 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 METTL1Q9UBP6 276 aaKnown RBP12.53□□□□□ -0.4
NCL-207ENST00000461347 HSF4Q9ULV5 492 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 A0A1W2PR77 199 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 HTD2P86397 168 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 PSG4Q00888 419 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 SLC38A11Q08AI6 406 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 OR1K1Q8NGR3 316 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 BSCL2Q96G97 398 aaPredicted RBP12.53□□□□□ -0.4
NCL-207ENST00000461347 ZNF737O75373 536 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 CLN5O75503 358 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 CST2P09228 141 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 MMP9P14780 707 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 CA6P23280 308 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 GABRA4P48169 554 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 RAB31Q13636 194 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 FAM58AQ8N1B3 248 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 ZNF488Q96MN9 340 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 ACTR3CQ9C0K3 210 aaPredicted RBP12.53□□□□□ -0.4
NCL-207ENST00000461347 TMEM222Q9H0R3 208 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 PCED1AQ9H1Q7 454 aa12.53□□□□□ -0.4
NCL-207ENST00000461347 A0A087X0M5 115 aa12.52□□□□□ -0.4
NCL-207ENST00000461347 A0A1B0GX30 115 aa12.52□□□□□ -0.4
NCL-207ENST00000461347 PITX3O75364 302 aa12.52□□□□□ -0.4
NCL-207ENST00000461347 COX5AP20674 150 aa12.52□□□□□ -0.4
NCL-207ENST00000461347 FGF7P21781 194 aa12.52□□□□□ -0.4
NCL-207ENST00000461347 GNG3P63215 75 aa12.52□□□□□ -0.4
NCL-207ENST00000461347 TMEM241Q24JQ0 296 aa12.52□□□□□ -0.4
NCL-207ENST00000461347 ZNF837Q96EG3 531 aaPredicted RBP12.52□□□□□ -0.4
NCL-207ENST00000461347 PACRGQ96M98 296 aaPredicted RBP12.52□□□□□ -0.4
NCL-207ENST00000461347 RTL8AQ9BWD3 113 aa12.52□□□□□ -0.4
NCL-207ENST00000461347 UBE2ZQ9H832 354 aaPredicted RBP12.52□□□□□ -0.4
NCL-207ENST00000461347 AKIRIN1Q9H9L7 192 aaPredicted RBP12.52□□□□□ -0.4
NCL-207ENST00000461347 ROS1P08922 2347 aa12.52□□□□□ -0.41
NCL-207ENST00000461347 IGHV5-10-1A0A0J9YXX1 117 aa12.52□□□□□ -0.41
NCL-207ENST00000461347 C5orf63A6NC05 138 aa12.52□□□□□ -0.41
NCL-207ENST00000461347 A8MXE2 369 aa12.52□□□□□ -0.41
NCL-207ENST00000461347 SOX15O60248 233 aa12.52□□□□□ -0.41
NCL-207ENST00000461347 EPHA8P29322 1005 aaPredicted RBP12.52□□□□□ -0.41
NCL-207ENST00000461347 SRD5A2P31213 254 aa12.52□□□□□ -0.41
NCL-207ENST00000461347 NPBWR2P48146 333 aa12.52□□□□□ -0.41
NCL-207ENST00000461347 SRSF4Q08170 494 aaKnown RBP12.52□□□□□ -0.41
NCL-207ENST00000461347 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.52□□□□□ -0.41
NCL-207ENST00000461347 TMEM18Q96B42 140 aa12.52□□□□□ -0.41
NCL-207ENST00000461347 PINX1Q96BK5 328 aaKnown RBP12.52□□□□□ -0.41
NCL-207ENST00000461347 LTBP2Q14767 1821 aa12.52□□□□□ -0.41
NCL-207ENST00000461347 TGIF2-C20orf24A0A0A6YYL0 155 aa12.52□□□□□ -0.41
NCL-207ENST00000461347 ZNF320A2RRD8 509 aa12.52□□□□□ -0.41
NCL-207ENST00000461347 EFNA2O43921 213 aa12.52□□□□□ -0.41
NCL-207ENST00000461347 ENDOGQ14249 297 aaKnown RBP12.52□□□□□ -0.41
NCL-207ENST00000461347 OR10V1Q8NGI7 309 aa12.52□□□□□ -0.41
NCL-207ENST00000461347 DBX1A6NMT0 343 aa12.51□□□□□ -0.41
NCL-207ENST00000461347 NDUFA2O43678 99 aa12.51□□□□□ -0.41
NCL-207ENST00000461347 IGHEP01854 428 aa12.51□□□□□ -0.41
NCL-207ENST00000461347 GCH1P30793 250 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms