RNA–Protein interactions for RNA: ENST00000460593.1

CPSF3-202, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 1 (best) BASIC

Gene CPSF3, Length 3,157 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-202ENST00000460593 GALR1P47211 349 aa10.09□□□□□ -0.79
CPSF3-202ENST00000460593 FAM3BP58499 235 aaPredicted RBP10.09□□□□□ -0.79
CPSF3-202ENST00000460593 ARL16Q0P5N6 197 aa10.09□□□□□ -0.79
CPSF3-202ENST00000460593 HERPUD1Q15011 391 aa10.09□□□□□ -0.79
CPSF3-202ENST00000460593 BEND2Q8NDZ0 799 aa10.09□□□□□ -0.79
CPSF3-202ENST00000460593 PLPPR1Q8TBJ4 325 aa10.09□□□□□ -0.79
CPSF3-202ENST00000460593 RLN3Q8WXF3 142 aa10.09□□□□□ -0.79
CPSF3-202ENST00000460593 GNPNAT1Q96EK6 184 aaPredicted RBP10.09□□□□□ -0.79
CPSF3-202ENST00000460593 ADGRG7Q96K78 797 aa10.09□□□□□ -0.79
CPSF3-202ENST00000460593 PLK3Q9H4B4 646 aa10.09□□□□□ -0.79
CPSF3-202ENST00000460593 SRD5A3Q9H8P0 318 aa10.09□□□□□ -0.79
CPSF3-202ENST00000460593 M0R135 149 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 M0R143 59 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 IGHV4-34P06331 123 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 PFN1P07737 140 aaKnown RBP10.08□□□□□ -0.8
CPSF3-202ENST00000460593 METTL15P1P0C7V9 234 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 GALNSP34059 522 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 RPS16P62249 146 aaKnown RBP10.08□□□□□ -0.8
CPSF3-202ENST00000460593 RELQ04864 619 aaPredicted RBP10.08□□□□□ -0.8
CPSF3-202ENST00000460593 CST9LP1Q5W188 147 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 OR1L3Q8NH93 324 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 RNASEH2CQ8TDP1 164 aaKnown RBP10.08□□□□□ -0.8
CPSF3-202ENST00000460593 ZNF799Q96GE5 643 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 CDCA3Q99618 268 aaPredicted RBP10.08□□□□□ -0.8
CPSF3-202ENST00000460593 ATP5SQ99766 215 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 ZNF286AQ9HBT8 521 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 Q9N2K0 584 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 CCL28Q9NRJ3 127 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 SPTY2D1-AS1A0A0U1RR47 76 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 ZNF705FA8MVS1 300 aaPredicted RBP10.08□□□□□ -0.8
CPSF3-202ENST00000460593 PPP5D1E7EU14 171 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 SCTP09683 121 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 ZNF705DP0CH99 300 aaPredicted RBP10.08□□□□□ -0.8
CPSF3-202ENST00000460593 ZNF705BP0CI00 300 aaPredicted RBP10.08□□□□□ -0.8
CPSF3-202ENST00000460593 RAB4BP61018 213 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 DEFB133Q30KQ1 61 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 ZNF441Q8N8Z8 693 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 DNASE2BQ8WZ79 361 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 V9GYS6 101 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 B4DEV8 164 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 LINC01565O15544 149 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 HBE1P02100 147 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 TK1P04183 234 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 FBLP22087 321 aaKnown RBP10.08□□□□□ -0.8
CPSF3-202ENST00000460593 NPBWR2P48146 333 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 TFPI2P48307 235 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 RAB35Q15286 201 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 ZNF295-AS1Q8N0V1 137 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 SDSLQ96GA7 329 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 ZNF385AQ96PM9 386 aaKnown RBP10.08□□□□□ -0.8
CPSF3-202ENST00000460593 HS3ST6Q96QI5 342 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 DIRC2Q96SL1 478 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 IL23AQ9NPF7 189 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 TAAR3PQ9P1P4 343 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 TCFL5Q9UL49 500 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 GOLT1BQ9Y3E0 138 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 PPIAL4AQ9Y536 164 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 ATG2AQ2TAZ0 1938 aa10.08□□□□□ -0.8
CPSF3-202ENST00000460593 CEP290O15078 2479 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 SELEP16581 610 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 EGR1P18146 543 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 ZNF41P51814 821 aaPredicted RBP10.07□□□□□ -0.8
CPSF3-202ENST00000460593 YPEL5P62699 121 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 GRB2P62993 217 aaKnown RBP10.07□□□□□ -0.8
CPSF3-202ENST00000460593 C17orf67Q0P5P2 114 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 ENDOGQ14249 297 aaKnown RBP10.07□□□□□ -0.8
CPSF3-202ENST00000460593 COL13A1Q5TAT6 717 aaPredicted RBP10.07□□□□□ -0.8
CPSF3-202ENST00000460593 RTL10Q7L3V2 364 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 CCDC71LQ8N9Z2 235 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 OR51H1Q8NH63 302 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 LMX1AQ8TE12 382 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 ST8SIA1Q92185 356 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 BADQ92934 168 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 IL22RA2Q969J5 263 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 ANGPTL4Q9BY76 406 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 CISD1Q9NZ45 108 aaKnown RBP10.07□□□□□ -0.8
CPSF3-202ENST00000460593 PRSS50Q9UI38 385 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 H7BYZ3 331 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 ETV2O00321 342 aaPredicted RBP10.07□□□□□ -0.8
CPSF3-202ENST00000460593 CDS2O95674 445 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 CEACAM1P13688 526 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 IRF2P14316 349 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 CHRNA7P36544 502 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 ZNF468Q5VIY5 522 aaPredicted RBP10.07□□□□□ -0.8
CPSF3-202ENST00000460593 PRAMEF20Q5VT98 475 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 OR8G5Q8NG78 346 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 OR10G3Q8NGC4 313 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 OR10J5Q8NHC4 309 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 IL36RNQ9UBH0 155 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 ABCA7Q8IZY2 2146 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 BRWD1Q9NSI6 2320 aa10.07□□□□□ -0.8
CPSF3-202ENST00000460593 GCGP01275 180 aa10.06□□□□□ -0.8
CPSF3-202ENST00000460593 OR51G1Q8NGK1 321 aa10.06□□□□□ -0.8
CPSF3-202ENST00000460593 PP6455Q8WZ26 134 aa10.06□□□□□ -0.8
CPSF3-202ENST00000460593 BORCS8Q96FH0 119 aa10.06□□□□□ -0.8
CPSF3-202ENST00000460593 FKBP11Q9NYL4 201 aa10.06□□□□□ -0.8
CPSF3-202ENST00000460593 IFNA5P01569 189 aa10.06□□□□□ -0.8
CPSF3-202ENST00000460593 EDN3P14138 238 aa10.06□□□□□ -0.8
CPSF3-202ENST00000460593 GABRG2P18507 467 aa10.06□□□□□ -0.8
CPSF3-202ENST00000460593 RPL23P62829 140 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms