RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 CORO2AQ92828 525 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 ARHGAP5-AS1Q96IT6 56 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 NICN1Q9BSH3 213 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 FAAP24Q9BTP7 215 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 PECRQ9BY49 303 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 NXF2Q9GZY0 626 aaKnown RBP9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 METTL8Q9H825 291 aaKnown RBP9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 SCPEP1Q9HB40 452 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 HIF1ANQ9NWT6 349 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 EXTL2Q9UBQ6 330 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 TACC2O95359 2948 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 SPG11Q96JI7 2443 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 A0A096LNT2 108 aa9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 UBE2QL1A1L167 161 aa9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 FABP12A6NFH5 140 aa9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 SULT1C2O00338 296 aa9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 ORC5O43913 435 aa9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 HPGDSO60760 199 aa9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 MT-ND4P03905 459 aa9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 CTXN2P0C2S0 81 aa9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 ZNF728P0DKX0 622 aa9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 IGHV4-31P0DP07 118 aa9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 CDK2P24941 298 aa9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 PTBP1P26599 531 aaKnown RBP eCLIP9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 PRSS3P35030 304 aa9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 EFNB2P52799 333 aa9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 ERVFRD-1P60508 538 aa9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 PYHIN1Q6K0P9 492 aa9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 FAHD2BQ6P2I3 314 aaPredicted RBP9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 LY6G5BQ8NDX9 201 aa9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 MSI2Q96DH6 328 aaKnown RBP9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 FAHD2AQ96GK7 314 aa9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 WDFY2Q96P53 400 aa9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 HEXA-AS1Q9H8Q6 139 aa9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 PTTG2Q9NZH5 202 aa9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 ONECUT1Q9UBC0 465 aa9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 MRPS7Q9Y2R9 242 aaKnown RBP9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 INSIG2Q9Y5U4 225 aa9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 AUP1Q9Y679 476 aa9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 USF3Q68DE3 2245 aa9.12□□□□□ -0.95
SMNDC1-203ENST00000460483 ANKRD17O75179 2603 aaKnown RBP9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 TRBV6-6A0A0A6YYG2 114 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 FAM157AC9JC47 383 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 MFNGO00587 321 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 CD5LO43866 347 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 RGS11O94810 467 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 DIRAS3O95661 229 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 MELTFP08582 738 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 GNB3P16520 340 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 ELK1P19419 428 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 IL2RGP31785 369 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 GLP1RP43220 463 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 TMEM50BP56557 158 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 HOXA4Q00056 320 aaPredicted RBP9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 RSBN1Q5VWQ0 802 aaPredicted RBP9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 STEAP3Q658P3 488 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 TMEM200BQ69YZ2 307 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 SIGIRRQ6IA17 410 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 GAPTQ8N292 157 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 OR4M1Q8NGD0 313 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 OR13D1Q8NGV5 346 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 SETD6Q8TBK2 473 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 CREB3L1Q96BA8 519 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 SLC25A38Q96DW6 304 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 SULT4A1Q9BR01 284 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 KCNK15Q9H427 330 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 C7orf69Q9H7B7 122 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 ZNF286AQ9HBT8 521 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 LPAR2Q9HBW0 351 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 IFT46Q9NQC8 304 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 TAS2R8Q9NYW2 309 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 KIF25Q9UIL4 384 aa9.11□□□□□ -0.95
SMNDC1-203ENST00000460483 A0A0A6YYD4 124 aa9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 KBTBD11-OT1A0A1B0GTJ5 212 aa9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 FOXI3A8MTJ6 420 aaPredicted RBP9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 A8MV72 311 aaPredicted RBP9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 KIAA1324LA8MWY0 1029 aaPredicted RBP9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 TOX4O94842 621 aa9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 LPLP06858 475 aa9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 ZFP36P26651 326 aaKnown RBP9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 GLIPR1P48060 266 aa9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 TAS2R20P59543 309 aa9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 ACTBP60709 375 aa9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 SEC61A1P61619 476 aaKnown RBP9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 ACTG1P63261 375 aa9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 SSBP1Q04837 148 aaKnown RBP9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 IL18Q14116 193 aa9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 CR1LQ2VPA4 569 aa9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 ZNF260Q3ZCT1 412 aa9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 Q3ZCU0 254 aa9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 PLAC9Q5JTB6 97 aa9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 HEPN1Q6WQI6 88 aa9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 RTN4RL2Q86UN3 420 aa9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 OR52M1Q8NGK5 317 aa9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 FAM216AQ8WUB2 273 aa9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 FCAMRQ8WWV6 532 aa9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 S100ZQ8WXG8 99 aa9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 GALMQ96C23 342 aa9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 AUNIPQ9H7T9 357 aa9.1□□□□□ -0.95
SMNDC1-203ENST00000460483 MBNL3Q9NUK0 354 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms