RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 SDK2Q58EX2 2172 aa5.28□□□□□ -1.56
UBQLN4-202ENST00000459954 FREM2Q5SZK8 3169 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 TPRP12270 2363 aaKnown RBP5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 A0A1B0GU03 582 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 RBFOX3A6NFN3 312 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 NPIPB11E5RHQ5 1161 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 H0Y980 276 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 TNFSF11O14788 317 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 AGPAT2O15120 278 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 PHF1O43189 567 aaPredicted RBP5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 SPRY1O43609 319 aaPredicted RBP5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 ANGPTL7O43827 346 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 NME2P1O60361 137 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 KLF7O75840 302 aaPredicted RBP5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 TK1P04183 234 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 P04436 131 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 SNRNP70P08621 437 aaKnown RBP5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 MYF5P13349 255 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 ZNF14P17017 642 aaPredicted RBP5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 AADACP22760 399 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 ATP6V0CP27449 155 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 OPRM1P35372 400 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 EIF2S3P41091 472 aaKnown RBP5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 CD200P41217 278 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 NPBWR2P48146 333 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 SULT1A1P50225 295 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 FOXL2P58012 376 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 TAS2R30P59541 319 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 VAMP2P63027 116 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 NHLH2Q02577 135 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 TLE4Q04727 773 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 SP6Q3SY56 376 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 NMSQ5H8A3 153 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 DCAF12Q5T6F0 453 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 PLCXD3Q63HM9 321 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 ZNF880Q6PDB4 577 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 SPSB3Q6PJ21 355 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 HEPN1Q6WQI6 88 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 SLC35E3Q7Z769 313 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 GGNQ86UU5 652 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 ZNF695Q8IW36 515 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 SELENOHQ8IZQ5 122 aaKnown RBP5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 LILRB2Q8N423 598 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 TMEM252Q8N6L7 170 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 SUMF2Q8NBJ7 301 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 OR5A2Q8NGI9 324 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 OR5L1Q8NGL2 311 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 OR2G3Q8NGZ4 309 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 OR2AE1Q8NHA4 323 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 OR2V1Q8NHB1 315 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 RAB40CQ96S21 281 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 TP53RKQ96S44 253 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 SCNM1Q9BWG6 230 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 SMIM3Q9BZL3 60 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 TMEM242Q9NWH2 141 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 OCIAD1Q9NX40 245 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 TREM2Q9NZC2 230 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 UBE2J1Q9Y385 318 aaPredicted RBP5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 MMP24Q9Y5R2 645 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 ATP23Q9Y6H3 246 aa5.27□□□□□ -1.57
UBQLN4-202ENST00000459954 ACACBO00763 2458 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 DMXL2Q8TDJ6 3036 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 IGSF23A1L1A6 192 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 NKX2-6A6NCS4 301 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 PCP4L1A6NKN8 68 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 CDRT15L2A8MXV6 281 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 J3QW42 95 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 M0R036 132 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 SS18L1O75177 396 aaPredicted RBP5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 OR2C1O95371 312 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 F10P00742 488 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 SRP19P09132 144 aaKnown RBP5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 SFTPCP11686 197 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 EDN3P14138 238 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 HOXA5P20719 270 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 APLNRP35414 380 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 FOLR3P41439 243 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 FXYD4P59646 89 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 PNRC1Q12796 327 aaPredicted RBP5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 FOXC1Q12948 553 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 DAZAP2Q15038 168 aaPredicted RBP5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 CEACAM16Q2WEN9 425 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 CEACAM21Q3KPI0 293 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 PIGYQ3MUY2 71 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 PHLDA2Q53GA4 152 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 MOB1BQ7L9L4 216 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 TBC1D26Q86UD7 250 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 CMTM1Q8IZ96 169 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 H1FOOQ8IZA3 346 aaPredicted RBP5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 IL22RA1Q8N6P7 574 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 ZNF611Q8N823 705 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 ZNF565Q8N9K5 539 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 FAM213BQ8TBF2 198 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 C2CD4CQ8TF44 421 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 MBD3L1Q8WWY6 194 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 PIGCQ92535 297 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 EXTL1Q92935 676 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 MR1Q95460 341 aa5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 LSM10Q969L4 123 aaKnown RBP5.26□□□□□ -1.57
UBQLN4-202ENST00000459954 MUCL1Q96DR8 90 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms