RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 SLC25A28Q96A46 364 aa8.77□□□□□ -1.01
UBR4-208ENST00000459947 KCTD12Q96CX2 325 aaKnown RBP8.77□□□□□ -1.01
UBR4-208ENST00000459947 CHCHD6Q9BRQ6 235 aa8.77□□□□□ -1.01
UBR4-208ENST00000459947 RAB18Q9NP72 206 aa8.77□□□□□ -1.01
UBR4-208ENST00000459947 IDI2-AS1Q9NZ38 188 aa8.77□□□□□ -1.01
UBR4-208ENST00000459947 KBTBD11-OT1A0A1B0GTJ5 212 aa8.77□□□□□ -1.01
UBR4-208ENST00000459947 ATXN7L3Q14CW9 347 aaPredicted RBP8.77□□□□□ -1.01
UBR4-208ENST00000459947 RNF144BQ7Z419 303 aa8.77□□□□□ -1.01
UBR4-208ENST00000459947 FAM89BQ8N5H3 189 aa8.77□□□□□ -1.01
UBR4-208ENST00000459947 C8orf31Q8N9H6 132 aa8.77□□□□□ -1.01
UBR4-208ENST00000459947 OR4M1Q8NGD0 313 aa8.77□□□□□ -1.01
UBR4-208ENST00000459947 COQ2Q96H96 371 aa8.77□□□□□ -1.01
UBR4-208ENST00000459947 TMEM133Q9H2Q1 129 aa8.77□□□□□ -1.01
UBR4-208ENST00000459947 ABRACLQ9P1F3 81 aa8.77□□□□□ -1.01
UBR4-208ENST00000459947 KIF25Q9UIL4 384 aa8.77□□□□□ -1.01
UBR4-208ENST00000459947 TOR1AO14656 332 aa8.77□□□□□ -1.01
UBR4-208ENST00000459947 NOL3O60936 208 aaKnown RBP8.77□□□□□ -1.01
UBR4-208ENST00000459947 RGS11O94810 467 aa8.77□□□□□ -1.01
UBR4-208ENST00000459947 ZNF497Q6ZNH5 498 aa8.77□□□□□ -1.01
UBR4-208ENST00000459947 SLC6A7Q99884 636 aa8.77□□□□□ -1.01
UBR4-208ENST00000459947 CALYQ9NYX4 217 aa8.77□□□□□ -1.01
UBR4-208ENST00000459947 A0A087X0M5 115 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 TRBV6-6A0A0A6YYG2 114 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 A0A1B0GX30 115 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 CHATP28329 748 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 QRFPP83859 136 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 AESQ08117 197 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 BAMBIQ13145 260 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 PHF21AQ96BD5 680 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 BANF2Q9H503 90 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 SIRT7Q9NRC8 400 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 ACANP16112 2415 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 IGHV4-38-2P0DP08 117 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 INSL4Q14641 139 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 LY6G6FQ5SQ64 297 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 CCDC144NLQ6NUI1 221 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 GPR141Q7Z602 305 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 BEND2Q8NDZ0 799 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 FAM216AQ8WUB2 273 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 LOC100506127A0A0U1RQW1 187 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 LDLRAD4O15165 306 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 TFF1P04155 84 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 GLIPR1P48060 266 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 ZNF626Q68DY1 528 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 FGFRL1Q8N441 504 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 OR9G1Q8NH87 305 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 MALSU1Q96EH3 234 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 PPIL3Q9H2H8 161 aaKnown RBP8.76□□□□□ -1.01
UBR4-208ENST00000459947 PLEKHJ1Q9NW61 149 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 TRAPPC2LQ9UL33 140 aa8.76□□□□□ -1.01
UBR4-208ENST00000459947 BLVRBP30043 206 aaPredicted RBP8.75□□□□□ -1.01
UBR4-208ENST00000459947 RBMXP38159 391 aaKnown RBP8.75□□□□□ -1.01
UBR4-208ENST00000459947 C2orf76Q3KRA6 126 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 SIGLECL1Q8N7X8 197 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 OR13F1Q8NGS4 319 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 CMTM3Q96MX0 182 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 LPAR5Q9H1C0 372 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 OR51E2Q9H255 320 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 NPIPB11E5RHQ5 1161 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 RNASEK-C17orf49H0YIS7 233 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 DIRAS3O95661 229 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 MT-ND4P03905 459 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 CCL3L1P16619 93 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 HES5Q5TA89 166 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 STEAP3Q658P3 488 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 SFXN4Q6P4A7 337 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 Q6YL49 198 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 TMEM104Q8NE00 496 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 OR51D1Q8NGF3 324 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 ACOT12Q8WYK0 555 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 ABCB10Q9NRK6 738 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 CSPG4Q6UVK1 2322 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 SERPINE3A8MV23 424 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 ODF3BA8MYP8 253 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 CD3GP09693 182 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 NKAPLQ5M9Q1 402 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 PLPPR1Q8TBJ4 325 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 GFI1Q99684 422 aa8.75□□□□□ -1.01
UBR4-208ENST00000459947 CHMP1AQ9HD42 196 aaPredicted RBP8.75□□□□□ -1.01
UBR4-208ENST00000459947 RNASE1P07998 156 aaKnown RBP8.74□□□□□ -1.01
UBR4-208ENST00000459947 CGB3P0DN86 165 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 CGB7P0DN87 165 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 DYNLT3P51808 116 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 PITPNAQ00169 270 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 LRRC75BQ2VPJ9 315 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 ANKRD13BQ86YJ7 626 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 PNKDQ8N490 385 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 MEGF9Q9H1U4 602 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 SCOCQ9UIL1 159 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 PITPNC1Q9UKF7 332 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 TACC2O95359 2948 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 TMEM272A0A1B0GTI8 110 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 A0A1B0GUS0 222 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 LEUTXA8MZ59 168 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 CDK2P24941 298 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 UNC119Q13432 240 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 Q6ZTK2 550 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 LINC00311Q8N616 119 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 AP3S1Q92572 193 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms