RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 SEC14L6B5MCN3 397 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 MPPED1O15442 326 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 DHHO43323 396 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 SPRY1O43609 319 aaPredicted RBP7.34□□□□□ -1.23
VPS50-208ENST00000458707 ANGPTL7O43827 346 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 SMPD2O60906 423 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 OR2J2O76002 312 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 ZFAND5O76080 213 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 SCAF4O95104 1147 aaKnown RBP7.34□□□□□ -1.23
VPS50-208ENST00000458707 VAMP5O95183 116 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 F10P00742 488 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 DBHP09172 617 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 CXCL1P09341 107 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 RD3LP0DJH9 198 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 MMP9P14780 707 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 GLB1P16278 677 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 S100A2P29034 98 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 TAGLN2P37802 199 aaKnown RBP7.34□□□□□ -1.23
VPS50-208ENST00000458707 NXPH1P58417 271 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 UBE2KP61086 200 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 HAGHQ16775 308 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 FAM27BQ5VT28 67 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 FAM69BQ5VUD6 431 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 FBXW9Q5XUX1 488 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 TMEM211Q6ICI0 200 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 DPPA3Q6W0C5 159 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 Q6ZPA2 131 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 SLC35E3Q7Z769 313 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 CLEC18CQ8NCF0 446 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 OR10G4Q8NGN3 311 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 TMEM171Q8WVE6 324 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 S100PBPQ96BU1 408 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 RBMXL1Q96E39 390 aaKnown RBP7.34□□□□□ -1.23
VPS50-208ENST00000458707 SPACA9Q96E40 222 aaPredicted RBP7.34□□□□□ -1.23
VPS50-208ENST00000458707 GNPNAT1Q96EK6 184 aaPredicted RBP7.34□□□□□ -1.23
VPS50-208ENST00000458707 TVP23CQ96ET8 276 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 ABHD14AQ9BUJ0 271 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 SLC25A31Q9H0C2 315 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 NKX2-4Q9H2Z4 354 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 IL19Q9UHD0 177 aa7.34□□□□□ -1.23
VPS50-208ENST00000458707 A0A087WZY1 265 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 IGKV1-12A0A0C4DH73 117 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 C3orf85A0A1B0GTC6 90 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 DUXBA0A1W2PPF3 345 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 ZNF727A8MUV8 499 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 A8MWP6 167 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 B4DEV8 164 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 PROB1E7EW31 1015 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 GEMIN2O14893 280 aaKnown RBP7.33□□□□□ -1.24
VPS50-208ENST00000458707 HIST1H2BKO60814 126 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 ZNF205O95201 554 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 ONECUT2O95948 504 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 PPYP01298 95 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 IGKV1D-12P01611 117 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 HIST1H2BJP06899 126 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 AADACP22760 399 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 HIST1H2BOP23527 126 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 HIST1H2BBP33778 126 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 NKX2-1P43699 371 aaPredicted RBP7.33□□□□□ -1.24
VPS50-208ENST00000458707 GLIPR1P48060 266 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 NDUFA6P56556 154 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 HIST1H2BDP58876 126 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 ERVFRD-1P60508 538 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 HIST1H2BCP62807 126 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 DLK1P80370 383 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 MRPS34P82930 218 aaKnown RBP7.33□□□□□ -1.24
VPS50-208ENST00000458707 BAXQ07812 192 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 RAB35Q15286 201 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 HIST2H2BEQ16778 126 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 KRTAP27-1Q3LI81 207 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 LINC01559Q495D7 138 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 NKAIN1Q4KMZ8 207 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.33□□□□□ -1.24
VPS50-208ENST00000458707 Q6ZS49 121 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 CPEB2Q7Z5Q1 589 aaKnown RBP7.33□□□□□ -1.24
VPS50-208ENST00000458707 ZNF429Q86V71 674 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 ODF3L1Q8IXM7 274 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 ZNF100Q8IYN0 542 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 GCNT2Q8N0V5 402 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 OSR2Q8N2R0 312 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 TMEM252Q8N6L7 170 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 NUDT10Q8NFP7 164 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 CLDND2Q8NHS1 167 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 NEK7Q8TDX7 302 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 DYRK2Q92630 601 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 HIST1H2BHQ93079 126 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 SPIN2AQ99865 258 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 HIST1H2BNQ99877 126 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 HIST1H2BMQ99879 126 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 SPIN2BQ9BPZ2 258 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 PLEK2Q9NYT0 353 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 MMP24Q9Y5R2 645 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 LIPGQ9Y5X9 500 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 RFNGQ9Y644 331 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 KIAA2026Q5HYC2 2103 aa7.33□□□□□ -1.24
VPS50-208ENST00000458707 TRAV1-1A0A0B4J248 108 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 A0A1B0GV50 99 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 CDRT15L2A8MXV6 281 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 TMEM238C9JI98 176 aa7.32□□□□□ -1.24
VPS50-208ENST00000458707 H0YL77 283 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms