RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 RPS23P62266 143 aaKnown RBP12.12□□□□□ -0.47
SCFD1-203ENST00000458591 SOHLH1Q5JUK2 328 aa12.12□□□□□ -0.47
SCFD1-203ENST00000458591 P4HA3Q7Z4N8 544 aa12.12□□□□□ -0.47
SCFD1-203ENST00000458591 C1QL4Q86Z23 238 aa12.12□□□□□ -0.47
SCFD1-203ENST00000458591 C17orf78Q8N4C9 275 aa12.12□□□□□ -0.47
SCFD1-203ENST00000458591 CCDC71LQ8N9Z2 235 aa12.12□□□□□ -0.47
SCFD1-203ENST00000458591 PLPPR1Q8TBJ4 325 aa12.12□□□□□ -0.47
SCFD1-203ENST00000458591 UNKLQ9H9P5 680 aaKnown RBP12.12□□□□□ -0.47
SCFD1-203ENST00000458591 IL36GQ9NZH8 169 aa12.12□□□□□ -0.47
SCFD1-203ENST00000458591 MMP24Q9Y5R2 645 aa12.12□□□□□ -0.47
SCFD1-203ENST00000458591 LIPGQ9Y5X9 500 aa12.12□□□□□ -0.47
SCFD1-203ENST00000458591 PCSK5Q92824 1860 aa12.12□□□□□ -0.47
SCFD1-203ENST00000458591 KIAA1549Q9HCM3 1950 aa12.12□□□□□ -0.47
SCFD1-203ENST00000458591 H0YL77 283 aa12.12□□□□□ -0.47
SCFD1-203ENST00000458591 HS3ST1O14792 307 aa12.12□□□□□ -0.47
SCFD1-203ENST00000458591 CHST1O43916 411 aa12.12□□□□□ -0.47
SCFD1-203ENST00000458591 OR2C1O95371 312 aa12.12□□□□□ -0.47
SCFD1-203ENST00000458591 MAS1LP35410 378 aa12.12□□□□□ -0.47
SCFD1-203ENST00000458591 RAB2AP61019 212 aa12.12□□□□□ -0.47
SCFD1-203ENST00000458591 RND3P61587 244 aa12.12□□□□□ -0.47
SCFD1-203ENST00000458591 SIGLEC12Q96PQ1 595 aa12.12□□□□□ -0.47
SCFD1-203ENST00000458591 CALHM2Q9HA72 323 aa12.12□□□□□ -0.47
SCFD1-203ENST00000458591 Q9N2K0 584 aa12.12□□□□□ -0.47
SCFD1-203ENST00000458591 ARGFXA6NJG6 315 aa12.11□□□□□ -0.47
SCFD1-203ENST00000458591 ZFP36L1Q07352 338 aaKnown RBP12.11□□□□□ -0.47
SCFD1-203ENST00000458591 LPAL2Q16609 132 aa12.11□□□□□ -0.47
SCFD1-203ENST00000458591 ACER2Q5QJU3 275 aa12.11□□□□□ -0.47
SCFD1-203ENST00000458591 TIPARPQ7Z3E1 657 aaKnown RBP12.11□□□□□ -0.47
SCFD1-203ENST00000458591 ZNF100Q8IYN0 542 aa12.11□□□□□ -0.47
SCFD1-203ENST00000458591 C1QTNF5Q9BXJ0 243 aa12.11□□□□□ -0.47
SCFD1-203ENST00000458591 ZNF552Q9H707 407 aaPredicted RBP12.11□□□□□ -0.47
SCFD1-203ENST00000458591 IGHV3-64DA0A0J9YX35 117 aa12.11□□□□□ -0.47
SCFD1-203ENST00000458591 ZNF732B4DXR9 585 aa12.11□□□□□ -0.47
SCFD1-203ENST00000458591 NTN3O00634 580 aaPredicted RBP12.11□□□□□ -0.47
SCFD1-203ENST00000458591 ZNF266Q14584 549 aa12.11□□□□□ -0.47
SCFD1-203ENST00000458591 VASH2Q86V25 355 aa12.11□□□□□ -0.47
SCFD1-203ENST00000458591 TUSC5Q8IXB3 177 aa12.11□□□□□ -0.47
SCFD1-203ENST00000458591 TMEM105Q8N8V8 129 aa12.11□□□□□ -0.47
SCFD1-203ENST00000458591 KCNE4Q8WWG9 221 aa12.11□□□□□ -0.47
SCFD1-203ENST00000458591 NOSIPQ9Y314 301 aaKnown RBP12.11□□□□□ -0.47
SCFD1-203ENST00000458591 URGCP-MRPS24S4R325 110 aa12.11□□□□□ -0.47
SCFD1-203ENST00000458591 RBFOX3A6NFN3 312 aa12.1□□□□□ -0.47
SCFD1-203ENST00000458591 WRBO00258 174 aa12.1□□□□□ -0.47
SCFD1-203ENST00000458591 IGHV2-70P01814 119 aa12.1□□□□□ -0.47
SCFD1-203ENST00000458591 C3AR1Q16581 482 aa12.1□□□□□ -0.47
SCFD1-203ENST00000458591 RDH5Q92781 318 aa12.1□□□□□ -0.47
SCFD1-203ENST00000458591 TMEM56Q96MV1 263 aa12.1□□□□□ -0.47
SCFD1-203ENST00000458591 TINAGQ9UJW2 476 aa12.1□□□□□ -0.47
SCFD1-203ENST00000458591 TMEM56-RWDD3S4R434 201 aa12.1□□□□□ -0.47
SCFD1-203ENST00000458591 MRPL33O75394 65 aaKnown RBP12.1□□□□□ -0.47
SCFD1-203ENST00000458591 PAX9P55771 341 aa12.1□□□□□ -0.47
SCFD1-203ENST00000458591 VAMP2P63027 116 aa12.1□□□□□ -0.47
SCFD1-203ENST00000458591 OR8G5Q8NG78 346 aa12.1□□□□□ -0.47
SCFD1-203ENST00000458591 OR51H1Q8NH63 302 aa12.1□□□□□ -0.47
SCFD1-203ENST00000458591 SPSB4Q96A44 273 aa12.1□□□□□ -0.47
SCFD1-203ENST00000458591 SGCZQ96LD1 299 aa12.1□□□□□ -0.47
SCFD1-203ENST00000458591 PLEKHF2Q9H8W4 249 aa12.1□□□□□ -0.47
SCFD1-203ENST00000458591 LYRM2Q9NU23 88 aaPredicted RBP12.1□□□□□ -0.47
SCFD1-203ENST00000458591 TAAR3PQ9P1P4 343 aa12.1□□□□□ -0.47
SCFD1-203ENST00000458591 TRBV23-1A0A0A0MS06 115 aa12.09□□□□□ -0.47
SCFD1-203ENST00000458591 CYTIPO60759 359 aa12.09□□□□□ -0.47
SCFD1-203ENST00000458591 YIF1AO95070 293 aa12.09□□□□□ -0.47
SCFD1-203ENST00000458591 CDS2O95674 445 aa12.09□□□□□ -0.47
SCFD1-203ENST00000458591 NAPSAO96009 420 aa12.09□□□□□ -0.47
SCFD1-203ENST00000458591 TK1P04183 234 aa12.09□□□□□ -0.47
SCFD1-203ENST00000458591 RD3LP0DJH9 198 aa12.09□□□□□ -0.47
SCFD1-203ENST00000458591 GFRA1P56159 465 aa12.09□□□□□ -0.47
SCFD1-203ENST00000458591 SRPXP78539 464 aa12.09□□□□□ -0.47
SCFD1-203ENST00000458591 TMEM267Q0VDI3 215 aaPredicted RBP12.09□□□□□ -0.47
SCFD1-203ENST00000458591 KIAA0141Q14154 515 aaPredicted RBP12.09□□□□□ -0.47
SCFD1-203ENST00000458591 NMSQ5H8A3 153 aa12.09□□□□□ -0.47
SCFD1-203ENST00000458591 HEPN1Q6WQI6 88 aa12.09□□□□□ -0.47
SCFD1-203ENST00000458591 HLA-CQ95604 372 aa12.09□□□□□ -0.47
SCFD1-203ENST00000458591 RAB39BQ96DA2 213 aa12.09□□□□□ -0.47
SCFD1-203ENST00000458591 TOLLIPQ9H0E2 274 aa12.09□□□□□ -0.47
SCFD1-203ENST00000458591 PLSCR2Q9NRY7 297 aa12.09□□□□□ -0.47
SCFD1-203ENST00000458591 TCFL5Q9UL49 500 aa12.09□□□□□ -0.47
SCFD1-203ENST00000458591 DOCK7Q96N67 2140 aa12.09□□□□□ -0.47
SCFD1-203ENST00000458591 FAM186AA6NE01 2351 aa12.09□□□□□ -0.47
SCFD1-203ENST00000458591 BTBD17A6NE02 478 aa12.08□□□□□ -0.47
SCFD1-203ENST00000458591 FAM166BA8MTA8 275 aa12.08□□□□□ -0.47
SCFD1-203ENST00000458591 H3BQ15 152 aa12.08□□□□□ -0.47
SCFD1-203ENST00000458591 GATCO43716 136 aaKnown RBP12.08□□□□□ -0.47
SCFD1-203ENST00000458591 PITX3O75364 302 aa12.08□□□□□ -0.47
SCFD1-203ENST00000458591 RPS10P46783 165 aaKnown RBP12.08□□□□□ -0.47
SCFD1-203ENST00000458591 PCBD1P61457 104 aa12.08□□□□□ -0.47
SCFD1-203ENST00000458591 FOXO1Q12778 655 aa12.08□□□□□ -0.47
SCFD1-203ENST00000458591 Q6ZRM9 215 aa12.08□□□□□ -0.47
SCFD1-203ENST00000458591 ZNF295-AS1Q8N0V1 137 aa12.08□□□□□ -0.47
SCFD1-203ENST00000458591 CYB561D1Q8N8Q1 229 aa12.08□□□□□ -0.47
SCFD1-203ENST00000458591 CPNE4Q96A23 557 aaPredicted RBP12.08□□□□□ -0.47
SCFD1-203ENST00000458591 REPIN1Q9BWE0 567 aaKnown RBP12.08□□□□□ -0.47
SCFD1-203ENST00000458591 PPIHO43447 177 aaKnown RBP12.08□□□□□ -0.48
SCFD1-203ENST00000458591 PGLYRP1O75594 196 aaPredicted RBP12.08□□□□□ -0.48
SCFD1-203ENST00000458591 SRP19P09132 144 aaKnown RBP12.08□□□□□ -0.48
SCFD1-203ENST00000458591 CXCL1P09341 107 aa12.08□□□□□ -0.48
SCFD1-203ENST00000458591 ZXDAP98168 799 aa12.08□□□□□ -0.48
SCFD1-203ENST00000458591 HNF4GQ14541 408 aa12.08□□□□□ -0.48
SCFD1-203ENST00000458591 HIKESHIQ53FT3 197 aa12.08□□□□□ -0.48
SCFD1-203ENST00000458591 COLCA1Q6ZS62 124 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms