RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 CSN2P05814 226 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 HNRNPCP07910 306 aaKnown RBP eCLIP7.54□□□□□ -1.2
VPS50-207ENST00000458530 CTXN2P0C2S0 81 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 MECP2P51608 486 aaKnown RBP7.54□□□□□ -1.2
VPS50-207ENST00000458530 UBE2MP61081 183 aaKnown RBP7.54□□□□□ -1.2
VPS50-207ENST00000458530 SNRPD2P62316 118 aaKnown RBP7.54□□□□□ -1.2
VPS50-207ENST00000458530 SURF2Q15527 256 aaPredicted RBP7.54□□□□□ -1.2
VPS50-207ENST00000458530 MSMPQ1L6U9 139 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 MICBQ29980 383 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 PRAMEF6Q5VXH4 476 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 C22orf34Q6ZV56 151 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 GLCCI1Q86VQ1 547 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 BATF2Q8N1L9 274 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 SUMF2Q8NBJ7 301 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 Q8TCH9 128 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 FAM222BQ8WU58 562 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 ITLN1Q8WWA0 313 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 ZNF488Q96MN9 340 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 DHRS9Q9BPW9 319 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 MED28Q9H204 178 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 MYOZ1Q9NP98 299 aaPredicted RBP7.54□□□□□ -1.2
VPS50-207ENST00000458530 DECR2Q9NUI1 292 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 UFSP2Q9NUQ7 469 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 ING3Q9NXR8 418 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 RNF7Q9UBF6 113 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 ANXA10Q9UJ72 324 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 F8VVB4 439 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 F8VWA3 439 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 SSNA1O43805 119 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 CCNKO75909 580 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 OR2H2O95918 312 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 NAPSAO96009 420 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 ZNF735P0CB33 412 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 FPR2P25090 351 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 RRAS2P62070 204 aaPredicted RBP7.53□□□□□ -1.2
VPS50-207ENST00000458530 CBX3Q13185 183 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 ZNF672Q499Z4 452 aaPredicted RBP7.53□□□□□ -1.2
VPS50-207ENST00000458530 CD276Q5ZPR3 534 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 FAHD2BQ6P2I3 314 aaPredicted RBP7.53□□□□□ -1.2
VPS50-207ENST00000458530 Q6P435 159 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 TRAT1Q6PIZ9 186 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 GLDNQ6ZMI3 551 aaPredicted RBP7.53□□□□□ -1.2
VPS50-207ENST00000458530 MOGAT3Q86VF5 341 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 C11orf53Q8IXP5 236 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 DMRTC2Q8IXT2 367 aaPredicted RBP7.53□□□□□ -1.2
VPS50-207ENST00000458530 OR4D10Q8NGI6 311 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 OR6F1Q8NGZ6 308 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 TERB2Q8NHR7 220 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 LINC01560Q8TB33 94 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 RDH5Q92781 318 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 FAHD2AQ96GK7 314 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 MDFIQ99750 246 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 SLC6A7Q99884 636 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 ALX4Q9H161 411 aaPredicted RBP7.53□□□□□ -1.2
VPS50-207ENST00000458530 OR51J1Q9H342 316 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 SAP30LQ9HAJ7 183 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 OR14J1Q9UGF5 321 aa7.53□□□□□ -1.2
VPS50-207ENST00000458530 HRNRQ86YZ3 2850 aaPredicted RBP7.52□□□□□ -1.21
VPS50-207ENST00000458530 TRAV24A0A0B4J272 114 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 TMEM30CPA0ZSE6 113 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 NKX6-3A6NJ46 265 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 E7EQL1 145 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 SIRPB1O00241 398 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 SLC33A1O00400 549 aaPredicted RBP7.52□□□□□ -1.21
VPS50-207ENST00000458530 HSPB6O14558 160 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 HS3ST1O14792 307 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 DIRAS3O95661 229 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 TK1P04183 234 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 OR5H8P0DN80 308 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 LMO1P25800 156 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 DUSP1P28562 367 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 GMFBP60983 142 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 HERV-K104P61576 105 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 SEC61A1P61619 476 aaKnown RBP7.52□□□□□ -1.21
VPS50-207ENST00000458530 MPPED2Q15777 294 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 C4orf46Q504U0 113 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 ZNF826PQ6ZT77 177 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 OVCH2Q7RTZ1 564 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 PEG10Q86TG7 708 aaKnown RBP7.52□□□□□ -1.21
VPS50-207ENST00000458530 OR4A4PQ8NGN8 299 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 LILRB1Q8NHL6 650 aaPredicted RBP7.52□□□□□ -1.21
VPS50-207ENST00000458530 ZFAND1Q8TCF1 268 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 PIK3IP1Q96FE7 263 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 HDHD3Q9BSH5 251 aaPredicted RBP7.52□□□□□ -1.21
VPS50-207ENST00000458530 Q9N2K0 584 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 RAB9BQ9NP90 201 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 CISD1Q9NZ45 108 aaKnown RBP7.52□□□□□ -1.21
VPS50-207ENST00000458530 KCNIP1Q9NZI2 227 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 IL36RNQ9UBH0 155 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 ZNF230Q9UIE0 474 aaPredicted RBP7.52□□□□□ -1.21
VPS50-207ENST00000458530 ZNF221Q9UK13 617 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 PPP1R3CQ9UQK1 317 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 C14orf166Q9Y224 244 aaKnown RBP7.52□□□□□ -1.21
VPS50-207ENST00000458530 WIPI2Q9Y4P8 454 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 TLN2Q9Y4G6 2542 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 RAI1Q7Z5J4 1906 aaPredicted RBP7.52□□□□□ -1.21
VPS50-207ENST00000458530 ARFGEF3Q5TH69 2177 aa7.52□□□□□ -1.21
VPS50-207ENST00000458530 A0A0A6YYJ9 748 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 A0A0B4J293 547 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 IGHV3-64DA0A0J9YX35 117 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms