RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 HOGA1Q86XE5 327 aa6.63□□□□□ -1.35
HDAC9-218ENST00000456174 CYB561D1Q8N8Q1 229 aa6.63□□□□□ -1.35
HDAC9-218ENST00000456174 FAM3DQ96BQ1 224 aa6.63□□□□□ -1.35
HDAC9-218ENST00000456174 OR10C1Q96KK4 312 aa6.63□□□□□ -1.35
HDAC9-218ENST00000456174 IMMP1LQ96LU5 166 aa6.63□□□□□ -1.35
HDAC9-218ENST00000456174 MS4A10Q96PG2 267 aa6.63□□□□□ -1.35
HDAC9-218ENST00000456174 RASL10BQ96S79 203 aa6.63□□□□□ -1.35
HDAC9-218ENST00000456174 HIF3AQ9Y2N7 669 aa6.63□□□□□ -1.35
HDAC9-218ENST00000456174 MRPS18BQ9Y676 258 aaKnown RBP6.63□□□□□ -1.35
HDAC9-218ENST00000456174 WSB1Q9Y6I7 421 aa6.63□□□□□ -1.35
HDAC9-218ENST00000456174 TRAV36DV7A0A075B6V5 113 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 C4orf47A7E2U8 309 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 PRH1P02810 166 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 BGLAPP02818 100 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 PFN1P07737 140 aaKnown RBP6.62□□□□□ -1.35
HDAC9-218ENST00000456174 MDKP21741 143 aaPredicted RBP6.62□□□□□ -1.35
HDAC9-218ENST00000456174 FAM3BP58499 235 aaPredicted RBP6.62□□□□□ -1.35
HDAC9-218ENST00000456174 MMDQ15546 238 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 Q5PR19 223 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 C1QL3Q5VWW1 255 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 ZNF66Q6ZN08 573 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 SUMF1Q8NBK3 374 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 OR10G3Q8NGC4 313 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 RNF138Q8WVD3 245 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 RASD2Q96D21 266 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 SPACA9Q96E40 222 aaPredicted RBP6.62□□□□□ -1.35
HDAC9-218ENST00000456174 DNAJA3Q96EY1 480 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 SDSLQ96GA7 329 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 LIN37Q96GY3 246 aaPredicted RBP6.62□□□□□ -1.35
HDAC9-218ENST00000456174 GPX7Q96SL4 187 aaPredicted RBP6.62□□□□□ -1.35
HDAC9-218ENST00000456174 VAMP8Q9BV40 100 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 HIPK2Q9H2X6 1198 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 METTL7AQ9H8H3 244 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 MRPL27Q9P0M9 148 aaKnown RBP6.62□□□□□ -1.35
HDAC9-218ENST00000456174 ZNF581Q9P0T4 197 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 SDK2Q58EX2 2172 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 TTC28Q96AY4 2481 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 SERTM2A0A1B0GWG4 89 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 DEDDO75618 318 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 C1QL1O75973 258 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 TCN2P20062 427 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 SUMO3P55854 103 aaPredicted RBP6.62□□□□□ -1.35
HDAC9-218ENST00000456174 CTXN1P60606 82 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 S100A10P60903 97 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 RPL18Q07020 188 aaKnown RBP6.62□□□□□ -1.35
HDAC9-218ENST00000456174 ODF1Q14990 250 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 ARL6IP1Q15041 203 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 TDRG1Q3Y452 100 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 CDCP2Q5VXM1 449 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 KLHL24Q6TFL4 600 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 TMEM108Q6UXF1 575 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 TOMM20LQ6UXN7 152 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 LRRC75AQ8NAA5 344 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 NPEPL1Q8NDH3 523 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 OR4D6Q8NGJ1 314 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 OR5L1Q8NGL2 311 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 ST8SIA1Q92185 356 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 TMEM230Q96A57 120 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 ZMYND19Q96E35 227 aaPredicted RBP6.62□□□□□ -1.35
HDAC9-218ENST00000456174 Q96M85 177 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 NMNAT3Q96T66 252 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 PRRX2Q99811 253 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 PLSCR4Q9NRQ2 329 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 TMEM106BQ9NUM4 274 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 OR6C3Q9NZP0 311 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 LAMTOR2Q9Y2Q5 125 aa6.62□□□□□ -1.35
HDAC9-218ENST00000456174 NSG1A0A0A6YYJ2 146 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 IFNL4K9M1U5 179 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 NPIPB7O75200 414 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 MT-CO3P00414 261 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 MT-ATP6P00846 226 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 CSN2P05814 226 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 SCGB1A1P11684 91 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 PTGDSP41222 190 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 RPS18P62269 152 aaKnown RBP6.61□□□□□ -1.35
HDAC9-218ENST00000456174 CCL20P78556 96 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 PMPCAQ10713 525 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 CNN3Q15417 329 aaKnown RBP6.61□□□□□ -1.35
HDAC9-218ENST00000456174 PSG3Q16557 428 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 C1orf140Q5VVS0 124 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 CLEC18BQ6UXF7 455 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 TMEM156Q8N614 296 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 OR4B1Q8NGF8 309 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 OR51L1Q8NGJ5 315 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 FAM213BQ8TBF2 198 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 CT55Q8WUE5 264 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 ERGIC1Q969X5 290 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 PTX4Q96A99 478 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 FGGYQ96C11 551 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 WFDC1Q9HC57 220 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 ZNF160Q9HCG1 818 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 ELOVL5Q9NYP7 299 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 HSF4Q9ULV5 492 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 VDAC3Q9Y277 283 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 SLC5A6Q9Y289 635 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 MSRB2Q9Y3D2 182 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 PPIAL4AQ9Y536 164 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 ZNF318Q5VUA4 2279 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.61□□□□□ -1.35
HDAC9-218ENST00000456174 A0A1W2PNU3 283 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms