RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 Q6P435 159 aa12.83□□□□□ -0.36
LDLR-202ENST00000455727 C20orf204Q6ZNR8 217 aa12.83□□□□□ -0.36
LDLR-202ENST00000455727 Q6ZT83 130 aa12.83□□□□□ -0.36
LDLR-202ENST00000455727 VASH2Q86V25 355 aa12.83□□□□□ -0.36
LDLR-202ENST00000455727 CMTM1Q8IZ96 169 aa12.83□□□□□ -0.36
LDLR-202ENST00000455727 SELENOHQ8IZQ5 122 aaKnown RBP12.83□□□□□ -0.36
LDLR-202ENST00000455727 CLEC18CQ8NCF0 446 aa12.83□□□□□ -0.36
LDLR-202ENST00000455727 IL22RA2Q969J5 263 aa12.83□□□□□ -0.36
LDLR-202ENST00000455727 HRH4Q9H3N8 390 aa12.83□□□□□ -0.36
LDLR-202ENST00000455727 C11orf1Q9H5F2 150 aa12.83□□□□□ -0.36
LDLR-202ENST00000455727 CDH20Q9HBT6 801 aa12.83□□□□□ -0.36
LDLR-202ENST00000455727 ZDHHC8Q9ULC8 765 aa12.83□□□□□ -0.36
LDLR-202ENST00000455727 POLDIP2Q9Y2S7 368 aa12.83□□□□□ -0.36
LDLR-202ENST00000455727 PIGBOS1A0A0B4J2F0 54 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 DEGS1O15121 323 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 RHBDL1O75783 438 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 ERVK11-1P61568 191 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 HLA-DRB3P79483 266 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 GABRA6Q16445 453 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 SPATA46Q5T0L3 261 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 SHEQ5VZ18 495 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 BTNL8Q6UX41 500 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 C5orf24Q7Z6I8 188 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 MYPOPQ86VE0 399 aaPredicted RBP12.82□□□□□ -0.36
LDLR-202ENST00000455727 SPAG16Q8N0X2 631 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 DEFB124Q8NES8 71 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 LYPD6BQ8NI32 183 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 RDH5Q92781 318 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 TSNAXQ99598 290 aaKnown RBP12.82□□□□□ -0.36
LDLR-202ENST00000455727 GINS3Q9BRX5 216 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 CABLES2Q9BTV7 478 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 FAM212BQ9NTI7 297 aaPredicted RBP12.82□□□□□ -0.36
LDLR-202ENST00000455727 PLA2G2EQ9NZK7 142 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 NKX2-6A6NCS4 301 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 NPIPB11E5RHQ5 1161 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 AQP7O14520 342 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 SIGLEC5O15389 551 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 FBXO24O75426 580 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 CELA3BP08861 270 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 ADCYAP1P18509 176 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 AKR1C2P52895 323 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 F2RL1P55085 397 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 SRSF3P84103 164 aaKnown RBP12.82□□□□□ -0.36
LDLR-202ENST00000455727 AKR1C1Q04828 323 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 ZNF324BQ6AW86 544 aaPredicted RBP12.82□□□□□ -0.36
LDLR-202ENST00000455727 C17orf78Q8N4C9 275 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 SEC11CQ9BY50 192 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 SMIM3Q9BZL3 60 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 OR2J1Q9GZK6 312 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 PARD6AQ9NPB6 346 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 CCL28Q9NRJ3 127 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 UQCC1Q9NVA1 299 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 RCL1Q9Y2P8 373 aaKnown RBP12.82□□□□□ -0.36
LDLR-202ENST00000455727 OR2W1Q9Y3N9 320 aa12.82□□□□□ -0.36
LDLR-202ENST00000455727 TRAV17A0A0B4J275 112 aa12.81□□□□□ -0.36
LDLR-202ENST00000455727 IQCF6A8MYZ5 107 aa12.81□□□□□ -0.36
LDLR-202ENST00000455727 H0Y980 276 aa12.81□□□□□ -0.36
LDLR-202ENST00000455727 WNT2P09544 360 aa12.81□□□□□ -0.36
LDLR-202ENST00000455727 SELEP16581 610 aa12.81□□□□□ -0.36
LDLR-202ENST00000455727 VDAC1P21796 283 aa12.81□□□□□ -0.36
LDLR-202ENST00000455727 IGF2-ASQ6U949 168 aa12.81□□□□□ -0.36
LDLR-202ENST00000455727 MOB1BQ7L9L4 216 aa12.81□□□□□ -0.36
LDLR-202ENST00000455727 WDR86Q86TI4 376 aa12.81□□□□□ -0.36
LDLR-202ENST00000455727 H1FOOQ8IZA3 346 aaPredicted RBP12.81□□□□□ -0.36
LDLR-202ENST00000455727 SCCPDHQ8NBX0 429 aa12.81□□□□□ -0.36
LDLR-202ENST00000455727 OR5D13Q8NGL4 314 aa12.81□□□□□ -0.36
LDLR-202ENST00000455727 OR10J5Q8NHC4 309 aa12.81□□□□□ -0.36
LDLR-202ENST00000455727 KIRREL1Q96J84 757 aa12.81□□□□□ -0.36
LDLR-202ENST00000455727 AIFM2Q9BRQ8 373 aa12.81□□□□□ -0.36
LDLR-202ENST00000455727 TOR1AO14656 332 aa12.8□□□□□ -0.36
LDLR-202ENST00000455727 ACAA1P09110 424 aaPredicted RBP12.8□□□□□ -0.36
LDLR-202ENST00000455727 S100GP29377 79 aa12.8□□□□□ -0.36
LDLR-202ENST00000455727 NKX2-1P43699 371 aaPredicted RBP12.8□□□□□ -0.36
LDLR-202ENST00000455727 NOVA1P51513 510 aaKnown RBP12.8□□□□□ -0.36
LDLR-202ENST00000455727 IDH3GP51553 393 aaPredicted RBP12.8□□□□□ -0.36
LDLR-202ENST00000455727 NMSQ5H8A3 153 aa12.8□□□□□ -0.36
LDLR-202ENST00000455727 LILRB1Q8NHL6 650 aaPredicted RBP12.8□□□□□ -0.36
LDLR-202ENST00000455727 BSCL2Q96G97 398 aaPredicted RBP12.8□□□□□ -0.36
LDLR-202ENST00000455727 TRIB1Q96RU8 372 aa12.8□□□□□ -0.36
LDLR-202ENST00000455727 SPAARA0A1B0GVQ0 90 aa12.8□□□□□ -0.36
LDLR-202ENST00000455727 F8W036 122 aa12.8□□□□□ -0.36
LDLR-202ENST00000455727 NUPL2O15504 423 aaKnown RBP12.8□□□□□ -0.36
LDLR-202ENST00000455727 PGLYRP1O75594 196 aaPredicted RBP12.8□□□□□ -0.36
LDLR-202ENST00000455727 SPP1P10451 314 aa12.8□□□□□ -0.36
LDLR-202ENST00000455727 ZNF44P15621 663 aa12.8□□□□□ -0.36
LDLR-202ENST00000455727 PVALBP20472 110 aaPredicted RBP12.8□□□□□ -0.36
LDLR-202ENST00000455727 ARHGDIBP52566 201 aa12.8□□□□□ -0.36
LDLR-202ENST00000455727 UCP2P55851 309 aa12.8□□□□□ -0.36
LDLR-202ENST00000455727 C1orf162Q8NEQ5 155 aaPredicted RBP12.8□□□□□ -0.36
LDLR-202ENST00000455727 NRIP2Q9BQI9 281 aa12.8□□□□□ -0.36
LDLR-202ENST00000455727 WFDC1Q9HC57 220 aa12.8□□□□□ -0.36
LDLR-202ENST00000455727 TREM1Q9NP99 234 aa12.8□□□□□ -0.36
LDLR-202ENST00000455727 CACNA1HO95180 2353 aa12.8□□□□□ -0.36
LDLR-202ENST00000455727 TMEM210A6NLX4 147 aa12.79□□□□□ -0.36
LDLR-202ENST00000455727 ATP6V1G2-DDX39BF2Z307 99 aa12.79□□□□□ -0.36
LDLR-202ENST00000455727 HSD17B6O14756 317 aa12.79□□□□□ -0.36
LDLR-202ENST00000455727 LYZL6O75951 148 aa12.79□□□□□ -0.36
LDLR-202ENST00000455727 PGA5P0DJD9 388 aa12.79□□□□□ -0.36
LDLR-202ENST00000455727 MMP9P14780 707 aa12.79□□□□□ -0.36
LDLR-202ENST00000455727 CBR1P16152 277 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms