RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 SSTR5P35346 364 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 MNX1P50219 401 aaPredicted RBP8.39□□□□□ -1.07
LINC01940-201ENST00000455228 RIPPLY3P57055 190 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 TAS2R31P59538 309 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 CKS1BP61024 79 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 FUT7Q11130 342 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 RAB31Q13636 194 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 SPSB3Q6PJ21 355 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 WFDC8Q8IUA0 241 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 OR52N5Q8NH56 324 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 SLC37A2Q8TED4 501 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 ELSPBP1Q96BH3 223 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 MRAP2Q96G30 205 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 BMFQ96LC9 184 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 TBX15Q96SF7 602 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 S1PR5Q9H228 398 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 MRPL22Q9NWU5 206 aaKnown RBP8.39□□□□□ -1.07
LINC01940-201ENST00000455228 COA3Q9Y2R0 106 aaPredicted RBP8.39□□□□□ -1.07
LINC01940-201ENST00000455228 OR51B2Q9Y5P1 312 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 XIRP2A4UGR9 3374 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 FTCDNL1E5RQL4 147 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 NPIPA5E9PKD4 350 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 NPIPA3F8WFD2 350 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 SOX1O00570 391 aaPredicted RBP8.39□□□□□ -1.07
LINC01940-201ENST00000455228 GEMIN2O14893 280 aaKnown RBP8.39□□□□□ -1.07
LINC01940-201ENST00000455228 MPZL1O95297 269 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 SEC11BP0C7V7 166 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 PSG1P11464 419 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 GP1BBP13224 206 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 FSTP19883 344 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 RUNX1Q01196 453 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 ROM1Q03395 351 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 PNRC1Q12796 327 aaPredicted RBP8.39□□□□□ -1.07
LINC01940-201ENST00000455228 FZD2Q14332 565 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 TMEM196Q5HYL7 178 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 C1orf53Q5VUE5 145 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 FGGYQ96C11 551 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 PLA2G2FQ9BZM2 168 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 NXF5Q9H1B4 397 aaKnown RBP8.39□□□□□ -1.07
LINC01940-201ENST00000455228 NPIPA1Q9UND3 350 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 STRAPQ9Y3F4 350 aaKnown RBP8.39□□□□□ -1.07
LINC01940-201ENST00000455228 R4GMQ9 66 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 FANCMQ8IYD8 2048 aa8.39□□□□□ -1.07
LINC01940-201ENST00000455228 CDC14CA4D256 554 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 IGFBP3P17936 291 aaPredicted RBP8.38□□□□□ -1.07
LINC01940-201ENST00000455228 TAS2R30P59541 319 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 S100A10P60903 97 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 ZNF260Q3ZCT1 412 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 PHF19Q5T6S3 580 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 AQP3Q92482 292 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 OR6C1Q96RD1 312 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 C20orf24Q9BUV8 137 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 WDR54Q9H977 334 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 SLC7A10Q9NS82 523 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 ABI3Q9P2A4 366 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 WIPI2Q9Y4P8 454 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 TRAV25A0A0B4J276 109 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 LMX1BO60663 402 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 ZNF354AO60765 605 aaPredicted RBP8.38□□□□□ -1.07
LINC01940-201ENST00000455228 LRP3O75074 770 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 TNFP01375 233 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 HSPB1P04792 205 aaKnown RBP8.38□□□□□ -1.07
LINC01940-201ENST00000455228 H2BFMP0C1H6 154 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 IGLC1P0CG04 106 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 ATP5IP56385 69 aaPredicted RBP8.38□□□□□ -1.07
LINC01940-201ENST00000455228 HHEXQ03014 270 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 ZNF92Q03936 586 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 HLA-DQA1Q5Y7H0 255 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 Q6ZRG5 221 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 Q6ZSR6 202 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 COX15Q7KZN9 410 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 ZNF615Q8N8J6 731 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 FER1L6-AS1Q8NA97 138 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 CFHR5Q9BXR6 569 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 UNC80Q8N2C7 3258 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 AQP7P3A6NL99 342 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 TNFRSF10CO14798 259 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 MT-ATP6P00846 226 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 CTSEP14091 401 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 ZNF117Q03924 483 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 ZFP36L1Q07352 338 aaKnown RBP8.38□□□□□ -1.07
LINC01940-201ENST00000455228 SGCBQ16585 318 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 ACOT6Q3I5F7 207 aaPredicted RBP8.38□□□□□ -1.07
LINC01940-201ENST00000455228 LCNL1Q6ZST4 164 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 MUC15Q8N387 334 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 ZNF524Q96C55 264 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 C8orf44Q96CB5 159 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 TXNIPQ9H3M7 391 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 PILRBQ9UKJ0 227 aa8.38□□□□□ -1.07
LINC01940-201ENST00000455228 IGSF23A1L1A6 192 aa8.37□□□□□ -1.07
LINC01940-201ENST00000455228 LINC01553A4QN01 128 aa8.37□□□□□ -1.07
LINC01940-201ENST00000455228 TOX4O94842 621 aa8.37□□□□□ -1.07
LINC01940-201ENST00000455228 KLF8O95600 359 aaPredicted RBP8.37□□□□□ -1.07
LINC01940-201ENST00000455228 BGLAPP02818 100 aa8.37□□□□□ -1.07
LINC01940-201ENST00000455228 CSTBP04080 98 aaKnown RBP8.37□□□□□ -1.07
LINC01940-201ENST00000455228 PFN1P07737 140 aaKnown RBP8.37□□□□□ -1.07
LINC01940-201ENST00000455228 PI3P19957 117 aa8.37□□□□□ -1.07
LINC01940-201ENST00000455228 TCN2P20062 427 aa8.37□□□□□ -1.07
LINC01940-201ENST00000455228 AZU1P20160 251 aa8.37□□□□□ -1.07
LINC01940-201ENST00000455228 KIR2DL1P43626 348 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms