RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 ERRFI1Q9UJM3 462 aaPredicted RBP11.6□□□□□ -0.55
CLK3-203ENST00000454830 BCL2L11O43521 198 aa11.6□□□□□ -0.55
CLK3-203ENST00000454830 SLC25A4P12235 298 aa11.6□□□□□ -0.55
CLK3-203ENST00000454830 S100GP29377 79 aa11.6□□□□□ -0.55
CLK3-203ENST00000454830 UBA52P62987 128 aaKnown RBP11.6□□□□□ -0.55
CLK3-203ENST00000454830 DAZAP2Q15038 168 aaPredicted RBP11.6□□□□□ -0.55
CLK3-203ENST00000454830 ESCO2Q56NI9 601 aa11.6□□□□□ -0.55
CLK3-203ENST00000454830 TMEM65Q6PI78 240 aa11.6□□□□□ -0.55
CLK3-203ENST00000454830 Q8IYB0 196 aa11.6□□□□□ -0.55
CLK3-203ENST00000454830 LGI3Q8N145 548 aa11.6□□□□□ -0.55
CLK3-203ENST00000454830 CXorf58Q96LI9 332 aa11.6□□□□□ -0.55
CLK3-203ENST00000454830 GLS2Q9UI32 602 aa11.6□□□□□ -0.55
CLK3-203ENST00000454830 AMDHD2Q9Y303 409 aa11.6□□□□□ -0.55
CLK3-203ENST00000454830 H0YIZ8 118 aa11.59□□□□□ -0.55
CLK3-203ENST00000454830 MLNRO43193 412 aa11.59□□□□□ -0.55
CLK3-203ENST00000454830 SPRY3O43610 288 aa11.59□□□□□ -0.55
CLK3-203ENST00000454830 GABRA2P47869 451 aa11.59□□□□□ -0.55
CLK3-203ENST00000454830 NAAAQ02083 359 aa11.59□□□□□ -0.55
CLK3-203ENST00000454830 IL13RA2Q14627 380 aa11.59□□□□□ -0.55
CLK3-203ENST00000454830 PDZD9Q8IXQ8 264 aa11.59□□□□□ -0.55
CLK3-203ENST00000454830 DNTTIP1Q9H147 329 aa11.59□□□□□ -0.55
CLK3-203ENST00000454830 CXXC4Q9H2H0 198 aa11.59□□□□□ -0.55
CLK3-203ENST00000454830 SPEF1Q9Y4P9 236 aa11.59□□□□□ -0.55
CLK3-203ENST00000454830 ATP23Q9Y6H3 246 aa11.59□□□□□ -0.55
CLK3-203ENST00000454830 ATMQ13315 3056 aa11.59□□□□□ -0.55
CLK3-203ENST00000454830 EDDM3AQ14507 147 aa11.59□□□□□ -0.55
CLK3-203ENST00000454830 KRTCAP3Q53RY4 240 aa11.59□□□□□ -0.55
CLK3-203ENST00000454830 LRP11Q86VZ4 500 aa11.59□□□□□ -0.55
CLK3-203ENST00000454830 MRPL30Q8TCC3 161 aaKnown RBP11.59□□□□□ -0.55
CLK3-203ENST00000454830 RIMS4Q9H426 269 aaPredicted RBP11.59□□□□□ -0.55
CLK3-203ENST00000454830 DNAJB11Q9UBS4 358 aa11.59□□□□□ -0.55
CLK3-203ENST00000454830 HAND1O96004 215 aa11.59□□□□□ -0.55
CLK3-203ENST00000454830 NAPSAO96009 420 aa11.59□□□□□ -0.55
CLK3-203ENST00000454830 LTC4SQ16873 150 aa11.59□□□□□ -0.55
CLK3-203ENST00000454830 TBC1D26Q86UD7 250 aa11.59□□□□□ -0.55
CLK3-203ENST00000454830 WFDC8Q8IUA0 241 aa11.59□□□□□ -0.55
CLK3-203ENST00000454830 TPRX1Q8N7U7 411 aa11.59□□□□□ -0.55
CLK3-203ENST00000454830 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.59□□□□□ -0.55
CLK3-203ENST00000454830 IGKV1D-13A0A0B4J2D9 117 aa11.58□□□□□ -0.55
CLK3-203ENST00000454830 RPS10-NUDT3A0A1W2PQS6 291 aa11.58□□□□□ -0.55
CLK3-203ENST00000454830 MPPED1O15442 326 aa11.58□□□□□ -0.55
CLK3-203ENST00000454830 IGKV1-13P0DP09 117 aa11.58□□□□□ -0.55
CLK3-203ENST00000454830 EPHA1P21709 976 aa11.58□□□□□ -0.55
CLK3-203ENST00000454830 CLEC9AQ6UXN8 241 aa11.58□□□□□ -0.55
CLK3-203ENST00000454830 PLPPR1Q8TBJ4 325 aa11.58□□□□□ -0.55
CLK3-203ENST00000454830 FAM57AQ8TBR7 257 aa11.58□□□□□ -0.55
CLK3-203ENST00000454830 RCC2Q9P258 522 aaKnown RBP11.58□□□□□ -0.55
CLK3-203ENST00000454830 C3orf85A0A1B0GTC6 90 aa11.58□□□□□ -0.56
CLK3-203ENST00000454830 MSGN1A6NI15 193 aa11.58□□□□□ -0.56
CLK3-203ENST00000454830 PRSS44E7EML9 344 aa11.58□□□□□ -0.56
CLK3-203ENST00000454830 ATP6V1G2-DDX39BF2Z307 99 aa11.58□□□□□ -0.56
CLK3-203ENST00000454830 NHLRC3Q5JS37 347 aa11.58□□□□□ -0.56
CLK3-203ENST00000454830 PRSS54Q6PEW0 395 aa11.58□□□□□ -0.56
CLK3-203ENST00000454830 Q8NFD4 153 aa11.58□□□□□ -0.56
CLK3-203ENST00000454830 RRNAD1Q96FB5 475 aaKnown RBP11.58□□□□□ -0.56
CLK3-203ENST00000454830 TP53RKQ96S44 253 aa11.58□□□□□ -0.56
CLK3-203ENST00000454830 RNF126Q9BV68 326 aa11.58□□□□□ -0.56
CLK3-203ENST00000454830 SUCNR1Q9BXA5 334 aa11.58□□□□□ -0.56
CLK3-203ENST00000454830 KCNIP1Q9NZI2 227 aa11.58□□□□□ -0.56
CLK3-203ENST00000454830 OR1A1Q9P1Q5 309 aa11.58□□□□□ -0.56
CLK3-203ENST00000454830 SLC25A15Q9Y619 301 aa11.58□□□□□ -0.56
CLK3-203ENST00000454830 GPR31O00270 319 aa11.58□□□□□ -0.56
CLK3-203ENST00000454830 TPD52L2O43399 206 aaKnown RBP11.58□□□□□ -0.56
CLK3-203ENST00000454830 CGAP01215 116 aa11.58□□□□□ -0.56
CLK3-203ENST00000454830 CTXN2P0C2S0 81 aa11.58□□□□□ -0.56
CLK3-203ENST00000454830 HERPUD1Q15011 391 aa11.58□□□□□ -0.56
CLK3-203ENST00000454830 PRR30Q53SZ7 412 aaPredicted RBP11.58□□□□□ -0.56
CLK3-203ENST00000454830 LIAT1Q6ZQX7 453 aa11.58□□□□□ -0.56
CLK3-203ENST00000454830 ZNF818PQ6ZRF7 136 aa11.58□□□□□ -0.56
CLK3-203ENST00000454830 LRRC29Q8WV35 223 aa11.58□□□□□ -0.56
CLK3-203ENST00000454830 GTF3AQ92664 365 aaKnown RBP11.58□□□□□ -0.56
CLK3-203ENST00000454830 PPP1R3CQ9UQK1 317 aa11.58□□□□□ -0.56
CLK3-203ENST00000454830 DCHS1Q96JQ0 3298 aa11.58□□□□□ -0.56
CLK3-203ENST00000454830 K7EPK0 472 aa11.57□□□□□ -0.56
CLK3-203ENST00000454830 PGA5P0DJD9 388 aa11.57□□□□□ -0.56
CLK3-203ENST00000454830 SELENOVP59797 346 aa11.57□□□□□ -0.56
CLK3-203ENST00000454830 HLA-DRB3P79483 266 aa11.57□□□□□ -0.56
CLK3-203ENST00000454830 TMEM187Q14656 261 aa11.57□□□□□ -0.56
CLK3-203ENST00000454830 THOC7Q6I9Y2 204 aaKnown RBP11.57□□□□□ -0.56
CLK3-203ENST00000454830 LINC00596Q86U02 117 aa11.57□□□□□ -0.56
CLK3-203ENST00000454830 FAM71E2Q8N5Q1 922 aa11.57□□□□□ -0.56
CLK3-203ENST00000454830 POC1AQ8NBT0 407 aa11.57□□□□□ -0.56
CLK3-203ENST00000454830 NARS2Q96I59 477 aaKnown RBP11.57□□□□□ -0.56
CLK3-203ENST00000454830 TREM2Q9NZC2 230 aa11.57□□□□□ -0.56
CLK3-203ENST00000454830 TAAR3PQ9P1P4 343 aa11.57□□□□□ -0.56
CLK3-203ENST00000454830 OR8U9P0C7N5 309 aa11.57□□□□□ -0.56
CLK3-203ENST00000454830 IL2RGP31785 369 aa11.57□□□□□ -0.56
CLK3-203ENST00000454830 AESQ08117 197 aa11.57□□□□□ -0.56
CLK3-203ENST00000454830 OR8U1Q8NH10 309 aa11.57□□□□□ -0.56
CLK3-203ENST00000454830 DHRS9Q9BPW9 319 aa11.57□□□□□ -0.56
CLK3-203ENST00000454830 NRIP2Q9BQI9 281 aa11.57□□□□□ -0.56
CLK3-203ENST00000454830 RNF150Q9ULK6 438 aa11.57□□□□□ -0.56
CLK3-203ENST00000454830 SESN1Q9Y6P5 492 aa11.57□□□□□ -0.56
CLK3-203ENST00000454830 TBR1Q16650 682 aa11.57□□□□□ -0.56
CLK3-203ENST00000454830 SLC35G3Q8N808 338 aa11.57□□□□□ -0.56
CLK3-203ENST00000454830 GLYATL2Q8WU03 294 aa11.57□□□□□ -0.56
CLK3-203ENST00000454830 ASF1BQ9NVP2 202 aa11.57□□□□□ -0.56
CLK3-203ENST00000454830 TMA7Q9Y2S6 64 aaKnown RBP11.57□□□□□ -0.56
CLK3-203ENST00000454830 A0A1B0GW55 424 aa11.56□□□□□ -0.56
CLK3-203ENST00000454830 LINC00862A6NCI5 91 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms