RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 PRR13Q9NZ81 148 aa9.1□□□□□ -0.95
GTF3C2-206ENST00000454704 NOSIPQ9Y314 301 aaKnown RBP9.1□□□□□ -0.95
GTF3C2-206ENST00000454704 C3orf85A0A1B0GTC6 90 aa9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 MSTNO14793 375 aa9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 MPPED1O15442 326 aa9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 KCNAB3O43448 404 aa9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 PITX3O75364 302 aa9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 MRPL33O75394 65 aaKnown RBP9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 SYNGR4O95473 234 aa9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 SCGB1D2O95969 90 aa9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 TK1P04183 234 aa9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 LMO1P25800 156 aa9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 NPBWR1P48145 328 aa9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 CAMLGP49069 296 aa9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 AKR1C2P52895 323 aa9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 ZNF92Q03936 586 aa9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 AKR1C1Q04828 323 aa9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 RHEBQ15382 184 aa9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 FAM219AQ8IW50 185 aa9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 ZNF611Q8N823 705 aa9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 ZNF565Q8N9K5 539 aa9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 OR5A2Q8NGI9 324 aa9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 PIGCQ92535 297 aa9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 ZNF837Q96EG3 531 aaPredicted RBP9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 REPIN1Q9BWE0 567 aaKnown RBP9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 PLEKHF2Q9H8W4 249 aa9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 PRRC2CQ9Y520 2896 aaKnown RBP9.09□□□□□ -0.95
GTF3C2-206ENST00000454704 CENPEQ02224 2701 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 CREBBPQ92793 2442 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 OR5B21A6NL26 309 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 ZNF587BE7ETH6 402 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 PHF1O43189 567 aaPredicted RBP9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 SS18L1O75177 396 aaPredicted RBP9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 NAPSAO96009 420 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 EDN3P14138 238 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 RCC1P18754 421 aaPredicted RBP9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 CD80P33681 288 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 OPRM1P35372 400 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 NKX2-1P43699 371 aaPredicted RBP9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 FXYD4P59646 89 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 SRSF3P84103 164 aaKnown RBP9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 GUK1Q16774 197 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 CEACAM21Q3KPI0 293 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 PIGYQ3MUY2 71 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 LYZL2Q7Z4W2 148 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 FOXRED2Q8IWF2 684 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 ZDHHC23Q8IYP9 409 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 OR2C3Q8N628 320 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 BOLLQ8N9W6 283 aaKnown RBP9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 CT55Q8WUE5 264 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 GNPNAT1Q96EK6 184 aaPredicted RBP9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 BOD1Q96IK1 185 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 IP6K3Q96PC2 410 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 LIME1Q9H400 295 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 C11orf1Q9H5F2 150 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 IFT22Q9H7X7 185 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 Q9N2K0 584 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 C19orf12Q9NSK7 152 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 CACFD1Q9UGQ2 172 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 RCL1Q9Y2P8 373 aaKnown RBP9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 MPC1Q9Y5U8 109 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 HIVEP3Q5T1R4 2406 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 ESPL1Q14674 2120 aa9.08□□□□□ -0.96
GTF3C2-206ENST00000454704 SHANK1Q9Y566 2161 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 G3V3Y1 287 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 TRAPPC2LH3BP13 241 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 TUSC2O75896 110 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 OR7C1O76099 320 aaPredicted RBP9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 AGFG2O95081 481 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 MT-ND4LP03901 98 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 HOXB1P14653 301 aaPredicted RBP9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 VDAC1P21796 283 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 GNLYP22749 145 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 AADACP22760 399 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 UCP1P25874 307 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 OTX2P32243 289 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 MDH2P40926 338 aaKnown RBP9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 RRADP55042 308 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 RAB2AP61019 212 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 EWSR1Q01844 656 aaKnown RBP eCLIP9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 RNPS1Q15287 305 aaKnown RBP9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 WIPI1Q5MNZ9 446 aaPredicted RBP9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 ZNF468Q5VIY5 522 aaPredicted RBP9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 MOB1BQ7L9L4 216 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 MRPL21Q7Z2W9 205 aaKnown RBP9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 CBLN2Q8IUK8 224 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 ZNF695Q8IW36 515 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 CMTM1Q8IZ96 169 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 SLC35G3Q8N808 338 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 OR5D13Q8NGL4 314 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 OR1J1Q8NGS3 322 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 ERGIC1Q969X5 290 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 HIST1H2AAQ96QV6 131 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 PAPOLGQ9BWT3 736 aaKnown RBP9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 GPR87Q9BY21 358 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 PKIBQ9C010 78 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 GP6Q9HCN6 339 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 UBE2J1Q9Y385 318 aaPredicted RBP9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 ATP23Q9Y6H3 246 aa9.07□□□□□ -0.96
GTF3C2-206ENST00000454704 ITPR2Q14571 2701 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms