RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 ZNF565Q8N9K5 539 aa13.27□□□□□ -0.29
UBE2D4-209ENST00000454428 CCDC54Q8NEL0 328 aa13.27□□□□□ -0.29
UBE2D4-209ENST00000454428 SPACA5Q96QH8 159 aa13.27□□□□□ -0.29
UBE2D4-209ENST00000454428 ELAC2Q9BQ52 826 aaKnown RBP13.27□□□□□ -0.29
UBE2D4-209ENST00000454428 ALX4Q9H161 411 aaPredicted RBP13.27□□□□□ -0.29
UBE2D4-209ENST00000454428 NCOR1P1Q9H4R4 102 aa13.27□□□□□ -0.29
UBE2D4-209ENST00000454428 VSIG4Q9Y279 399 aa13.27□□□□□ -0.29
UBE2D4-209ENST00000454428 KIAA1109Q2LD37 5005 aa13.27□□□□□ -0.29
UBE2D4-209ENST00000454428 MEIKINA0A087WXM9 373 aa13.26□□□□□ -0.29
UBE2D4-209ENST00000454428 A8MZ25 164 aa13.26□□□□□ -0.29
UBE2D4-209ENST00000454428 HSPB6O14558 160 aa13.26□□□□□ -0.29
UBE2D4-209ENST00000454428 DEGS1O15121 323 aa13.26□□□□□ -0.29
UBE2D4-209ENST00000454428 IGLV1-40P01703 118 aa13.26□□□□□ -0.29
UBE2D4-209ENST00000454428 GAPDHP04406 335 aaKnown RBP13.26□□□□□ -0.29
UBE2D4-209ENST00000454428 RAP2AP10114 183 aa13.26□□□□□ -0.29
UBE2D4-209ENST00000454428 TNCP24821 2201 aa13.26□□□□□ -0.29
UBE2D4-209ENST00000454428 SSTR5P35346 364 aa13.26□□□□□ -0.29
UBE2D4-209ENST00000454428 SLURP1P55000 103 aa13.26□□□□□ -0.29
UBE2D4-209ENST00000454428 EFNB1P98172 346 aa13.26□□□□□ -0.29
UBE2D4-209ENST00000454428 ACSM6Q6P461 480 aa13.26□□□□□ -0.29
UBE2D4-209ENST00000454428 OR5D18Q8NGL1 313 aa13.26□□□□□ -0.29
UBE2D4-209ENST00000454428 ST6GALNAC6Q969X2 333 aa13.26□□□□□ -0.29
UBE2D4-209ENST00000454428 TBX5Q99593 518 aa13.26□□□□□ -0.29
UBE2D4-209ENST00000454428 RASL11BQ9BPW5 248 aa13.26□□□□□ -0.29
UBE2D4-209ENST00000454428 TRAV39A0A0B4J263 110 aa13.25□□□□□ -0.29
UBE2D4-209ENST00000454428 TRAV24A0A0B4J272 114 aa13.25□□□□□ -0.29
UBE2D4-209ENST00000454428 G3V318 75 aa13.25□□□□□ -0.29
UBE2D4-209ENST00000454428 PRKACBP22694 351 aa13.25□□□□□ -0.29
UBE2D4-209ENST00000454428 MYF6P23409 242 aa13.25□□□□□ -0.29
UBE2D4-209ENST00000454428 SOX6P35712 828 aa13.25□□□□□ -0.29
UBE2D4-209ENST00000454428 ZP1P60852 638 aa13.25□□□□□ -0.29
UBE2D4-209ENST00000454428 GABPB1Q06547 395 aaPredicted RBP13.25□□□□□ -0.29
UBE2D4-209ENST00000454428 RSBN1Q5VWQ0 802 aaPredicted RBP13.25□□□□□ -0.29
UBE2D4-209ENST00000454428 SLC16A12Q6ZSM3 486 aa13.25□□□□□ -0.29
UBE2D4-209ENST00000454428 DHFR2Q86XF0 187 aa13.25□□□□□ -0.29
UBE2D4-209ENST00000454428 OR6Q1Q8NGQ2 317 aa13.25□□□□□ -0.29
UBE2D4-209ENST00000454428 PLPPR1Q8TBJ4 325 aa13.25□□□□□ -0.29
UBE2D4-209ENST00000454428 MRGPRDQ8TDS7 321 aa13.25□□□□□ -0.29
UBE2D4-209ENST00000454428 OPALINQ96PE5 141 aa13.25□□□□□ -0.29
UBE2D4-209ENST00000454428 TPSG1Q9NRR2 321 aa13.25□□□□□ -0.29
UBE2D4-209ENST00000454428 TAGLN3Q9UI15 199 aa13.25□□□□□ -0.29
UBE2D4-209ENST00000454428 FAM90A10PA6NDY2 464 aa13.24□□□□□ -0.29
UBE2D4-209ENST00000454428 H0YJX3 145 aa13.24□□□□□ -0.29
UBE2D4-209ENST00000454428 MOSP00540 346 aa13.24□□□□□ -0.29
UBE2D4-209ENST00000454428 KRT8P05787 483 aa13.24□□□□□ -0.29
UBE2D4-209ENST00000454428 CD1BP29016 333 aa13.24□□□□□ -0.29
UBE2D4-209ENST00000454428 C21orf33P30042 268 aaPredicted RBP13.24□□□□□ -0.29
UBE2D4-209ENST00000454428 ISL1P61371 349 aa13.24□□□□□ -0.29
UBE2D4-209ENST00000454428 HAPLN4Q86UW8 402 aa13.24□□□□□ -0.29
UBE2D4-209ENST00000454428 ADGRG5Q8IZF4 528 aa13.24□□□□□ -0.29
UBE2D4-209ENST00000454428 OR10A7Q8NGE5 316 aa13.24□□□□□ -0.29
UBE2D4-209ENST00000454428 RTN4IP1Q8WWV3 396 aaPredicted RBP13.24□□□□□ -0.29
UBE2D4-209ENST00000454428 ARPC1AQ92747 370 aa13.24□□□□□ -0.29
UBE2D4-209ENST00000454428 SPSB1Q96BD6 273 aa13.24□□□□□ -0.29
UBE2D4-209ENST00000454428 FGGYQ96C11 551 aa13.24□□□□□ -0.29
UBE2D4-209ENST00000454428 SPATA25Q9BR10 227 aa13.24□□□□□ -0.29
UBE2D4-209ENST00000454428 ADI1Q9BV57 179 aa13.24□□□□□ -0.29
UBE2D4-209ENST00000454428 TEX12Q9BXU0 123 aa13.24□□□□□ -0.29
UBE2D4-209ENST00000454428 ZNF556Q9HAH1 456 aa13.24□□□□□ -0.29
UBE2D4-209ENST00000454428 RHOFQ9HBH0 211 aa13.24□□□□□ -0.29
UBE2D4-209ENST00000454428 WSB1Q9Y6I7 421 aa13.24□□□□□ -0.29
UBE2D4-209ENST00000454428 VPS13DQ5THJ4 4388 aa13.23□□□□□ -0.29
UBE2D4-209ENST00000454428 A0A1W2PQL4 384 aaPredicted RBP13.23□□□□□ -0.29
UBE2D4-209ENST00000454428 METTL15A6NJ78 407 aa13.23□□□□□ -0.29
UBE2D4-209ENST00000454428 OR5H8P0DN80 308 aa13.23□□□□□ -0.29
UBE2D4-209ENST00000454428 VHLP40337 213 aa13.23□□□□□ -0.29
UBE2D4-209ENST00000454428 RAB9AP51151 201 aa13.23□□□□□ -0.29
UBE2D4-209ENST00000454428 CRISP1P54107 249 aa13.23□□□□□ -0.29
UBE2D4-209ENST00000454428 PAX5Q02548 391 aa13.23□□□□□ -0.29
UBE2D4-209ENST00000454428 TRIM25Q14258 630 aaKnown RBP13.23□□□□□ -0.29
UBE2D4-209ENST00000454428 PTGES3Q15185 160 aaKnown RBP13.23□□□□□ -0.29
UBE2D4-209ENST00000454428 HAGHQ16775 308 aa13.23□□□□□ -0.29
UBE2D4-209ENST00000454428 LYPD6Q86Y78 171 aa13.23□□□□□ -0.29
UBE2D4-209ENST00000454428 SAXO1Q8IYX7 474 aa13.23□□□□□ -0.29
UBE2D4-209ENST00000454428 OR8H1Q8NGG4 311 aa13.23□□□□□ -0.29
UBE2D4-209ENST00000454428 OR51J1Q9H342 316 aa13.23□□□□□ -0.29
UBE2D4-209ENST00000454428 KRT84Q9NSB2 600 aa13.23□□□□□ -0.29
UBE2D4-209ENST00000454428 KIAA1456Q9P272 454 aa13.23□□□□□ -0.29
UBE2D4-209ENST00000454428 MT-ND2P03891 347 aa13.22□□□□□ -0.29
UBE2D4-209ENST00000454428 UBCP0CG48 685 aaKnown RBP13.22□□□□□ -0.29
UBE2D4-209ENST00000454428 PAN3Q58A45 887 aaKnown RBP13.22□□□□□ -0.29
UBE2D4-209ENST00000454428 NXNL2Q5VZ03 156 aa13.22□□□□□ -0.29
UBE2D4-209ENST00000454428 TMEM65Q6PI78 240 aa13.22□□□□□ -0.29
UBE2D4-209ENST00000454428 LINC00311Q8N616 119 aa13.22□□□□□ -0.29
UBE2D4-209ENST00000454428 MBOAT4Q96T53 435 aa13.22□□□□□ -0.29
UBE2D4-209ENST00000454428 CHCHD6Q9BRQ6 235 aa13.22□□□□□ -0.29
UBE2D4-209ENST00000454428 ZNF581Q9P0T4 197 aa13.22□□□□□ -0.29
UBE2D4-209ENST00000454428 ZNF107Q9UII5 783 aaPredicted RBP13.22□□□□□ -0.29
UBE2D4-209ENST00000454428 IGHV4OR15-8A0A075B7B6 117 aa13.21□□□□□ -0.29
UBE2D4-209ENST00000454428 A0A087WW49 117 aa13.21□□□□□ -0.29
UBE2D4-209ENST00000454428 LINC01619G3V211 115 aa13.21□□□□□ -0.29
UBE2D4-209ENST00000454428 SULT1C4O75897 302 aa13.21□□□□□ -0.29
UBE2D4-209ENST00000454428 APOL3O95236 402 aa13.21□□□□□ -0.29
UBE2D4-209ENST00000454428 SLC2A2P11168 524 aaPredicted RBP13.21□□□□□ -0.29
UBE2D4-209ENST00000454428 ANXA8P13928 327 aa13.21□□□□□ -0.29
UBE2D4-209ENST00000454428 TCEANCQ8N8B7 351 aa13.21□□□□□ -0.29
UBE2D4-209ENST00000454428 OR10AC1Q8NH08 325 aa13.21□□□□□ -0.29
UBE2D4-209ENST00000454428 CNIH3Q8TBE1 160 aa13.21□□□□□ -0.29
UBE2D4-209ENST00000454428 TOLLIPQ9H0E2 274 aa13.21□□□□□ -0.29
UBE2D4-209ENST00000454428 NDE1Q9NXR1 346 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms