RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 CAPSLQ8WWF8 208 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 TMEM158Q8WZ71 300 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 APH1AQ96BI3 265 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 ITCHQ96J02 903 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 SDF2Q99470 211 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 RARRES2Q99969 163 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 KCNS3Q9BQ31 491 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 DPY30Q9C005 99 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 RETNQ9HD89 108 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 KCNIP1Q9NZI2 227 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 KIF25Q9UIL4 384 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 HDGFL3Q9Y3E1 203 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 UGT2A1Q9Y4X1 527 aa3.22□□□□□ -1.89
LINC00393-202ENST00000452852 YLPM1P49750 1951 aaKnown RBP3.21□□□□□ -1.89
LINC00393-202ENST00000452852 IGLV8-61A0A075B6I0 122 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 LOC100653049A0A140TA62 436 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 KBTBD11-OT1A0A1B0GTJ5 212 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 DPRXA6NFQ7 191 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 OR5H1A6NKK0 313 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 M0R1B8 84 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 SIVA1O15304 175 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 EIF1BO60739 113 aaKnown RBP3.21□□□□□ -1.9
LINC00393-202ENST00000452852 KRT34O76011 436 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 CPSF4O95639 269 aaKnown RBP3.21□□□□□ -1.9
LINC00393-202ENST00000452852 SERPINE2P07093 398 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 STAG3L2P0CL84 134 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 OR12D1P0DN82 309 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 SLC25A16P16260 332 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 MGMTP16455 207 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 TBPP20226 339 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 S100A3P33764 101 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 MDH2P40926 338 aaKnown RBP3.21□□□□□ -1.9
LINC00393-202ENST00000452852 POLR2HP52434 150 aaKnown RBP3.21□□□□□ -1.9
LINC00393-202ENST00000452852 SLC35A1P78382 337 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 EMX2Q04743 252 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 SKP2Q13309 424 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 ZNF141Q15928 474 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 PRR4Q16378 134 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 PGGHGQ32M88 737 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 FBXW9Q5XUX1 488 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 TMPPEQ6ZT21 453 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 GRINAQ7Z429 371 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 ABHD12BQ7Z5M8 362 aaPredicted RBP3.21□□□□□ -1.9
LINC00393-202ENST00000452852 VTCN1Q7Z7D3 282 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 ZNF546Q86UE3 836 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 LHFPL3Q86UP9 236 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 CLECL1Q8IZS7 167 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 MUC15Q8N387 334 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 TRIML2Q8N7C3 387 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 ZNF433Q8N7K0 673 aaPredicted RBP3.21□□□□□ -1.9
LINC00393-202ENST00000452852 LYPD6BQ8NI32 183 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 ZNF502Q8TBZ5 544 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 TCP10LQ8TDR4 215 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 FGGYQ96C11 551 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 ROPN1LQ96C74 230 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 DDIT4LQ96D03 193 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 PPP1R36Q96LQ0 422 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 ZIM3Q96PE6 472 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 SH3GL1Q99961 368 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 DHRS9Q9BPW9 319 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 PYGO2Q9BRQ0 406 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 OR51I1Q9H343 314 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 Q9H3A6 140 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 ISG20L2Q9H9L3 353 aaKnown RBP3.21□□□□□ -1.9
LINC00393-202ENST00000452852 CBLN4Q9NTU7 201 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 ACER3Q9NUN7 267 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 MYEF2Q9P2K5 600 aaKnown RBP3.21□□□□□ -1.9
LINC00393-202ENST00000452852 SLC17A7Q9P2U7 560 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 CLN8Q9UBY8 286 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 MARCOQ9UEW3 520 aaPredicted RBP3.21□□□□□ -1.9
LINC00393-202ENST00000452852 FLVCR1Q9Y5Y0 555 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 KCNE3Q9Y6H6 103 aa3.21□□□□□ -1.9
LINC00393-202ENST00000452852 ACANP16112 2415 aa3.2□□□□□ -1.9
LINC00393-202ENST00000452852 TMED7-TICAM2A0A0A6YYA0 188 aa3.2□□□□□ -1.9
LINC00393-202ENST00000452852 TRBV9A0A0B4J1U6 114 aa3.2□□□□□ -1.9
LINC00393-202ENST00000452852 A0A1B0GVY2 172 aa3.2□□□□□ -1.9
LINC00393-202ENST00000452852 FAM231BA6NCW3 169 aa3.2□□□□□ -1.9
LINC00393-202ENST00000452852 E7EQL1 145 aa3.2□□□□□ -1.9
LINC00393-202ENST00000452852 SCN2BO60939 215 aa3.2□□□□□ -1.9
LINC00393-202ENST00000452852 FCN3O75636 299 aa3.2□□□□□ -1.9
LINC00393-202ENST00000452852 PAHP00439 452 aa3.2□□□□□ -1.9
LINC00393-202ENST00000452852 DBIP07108 87 aaKnown RBP3.2□□□□□ -1.9
LINC00393-202ENST00000452852 BPGMP07738 259 aa3.2□□□□□ -1.9
LINC00393-202ENST00000452852 GUSBP08236 651 aa3.2□□□□□ -1.9
LINC00393-202ENST00000452852 PTNP21246 168 aa3.2□□□□□ -1.9
LINC00393-202ENST00000452852 CXCR1P25024 350 aa3.2□□□□□ -1.9
LINC00393-202ENST00000452852 BTCP35070 178 aa3.2□□□□□ -1.9
LINC00393-202ENST00000452852 VDAC2P45880 294 aaPredicted RBP3.2□□□□□ -1.9
LINC00393-202ENST00000452852 TFPI2P48307 235 aa3.2□□□□□ -1.9
LINC00393-202ENST00000452852 IDH2P48735 452 aaKnown RBP3.2□□□□□ -1.9
LINC00393-202ENST00000452852 MRPL19P49406 292 aaKnown RBP3.2□□□□□ -1.9
LINC00393-202ENST00000452852 PRPS1P60891 318 aa3.2□□□□□ -1.9
LINC00393-202ENST00000452852 UBE2MP61081 183 aaKnown RBP3.2□□□□□ -1.9
LINC00393-202ENST00000452852 UBE2NP61088 152 aaKnown RBP3.2□□□□□ -1.9
LINC00393-202ENST00000452852 COPZ1P61923 177 aa3.2□□□□□ -1.9
LINC00393-202ENST00000452852 SNRPD2P62316 118 aaKnown RBP3.2□□□□□ -1.9
LINC00393-202ENST00000452852 SELENOTP62341 195 aa3.2□□□□□ -1.9
LINC00393-202ENST00000452852 ACTA2P62736 377 aa3.2□□□□□ -1.9
LINC00393-202ENST00000452852 ERVK-25P63136 954 aa3.2□□□□□ -1.9
LINC00393-202ENST00000452852 ACTG2P63267 376 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms