RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 NUDT19A8MXV4 375 aa8.6□□□□□ -1.03
USP1-204ENST00000452143 NPIPB11E5RHQ5 1161 aa8.6□□□□□ -1.03
USP1-204ENST00000452143 H0YHG0 523 aa8.6□□□□□ -1.03
USP1-204ENST00000452143 IGHG2P01859 326 aa8.6□□□□□ -1.03
USP1-204ENST00000452143 RASSF2P50749 326 aa8.6□□□□□ -1.03
USP1-204ENST00000452143 SNRPGP62308 76 aaKnown RBP8.6□□□□□ -1.03
USP1-204ENST00000452143 MRPL28Q13084 256 aaKnown RBP8.6□□□□□ -1.03
USP1-204ENST00000452143 ALKBH1Q13686 389 aaKnown RBP8.6□□□□□ -1.03
USP1-204ENST00000452143 IL13RA2Q14627 380 aa8.6□□□□□ -1.03
USP1-204ENST00000452143 UTF1Q5T230 341 aa8.6□□□□□ -1.03
USP1-204ENST00000452143 C1orf146Q5VVC0 180 aa8.6□□□□□ -1.03
USP1-204ENST00000452143 UNQ9370/PRO34162Q6UXP9 181 aa8.6□□□□□ -1.03
USP1-204ENST00000452143 SLC35E3Q7Z769 313 aa8.6□□□□□ -1.03
USP1-204ENST00000452143 ZNF695Q8IW36 515 aa8.6□□□□□ -1.03
USP1-204ENST00000452143 SYS1Q8N2H4 156 aa8.6□□□□□ -1.03
USP1-204ENST00000452143 KLHL30-AS1Q8NEE0 82 aa8.6□□□□□ -1.03
USP1-204ENST00000452143 PXT1Q8NFP0 134 aa8.6□□□□□ -1.03
USP1-204ENST00000452143 OR13A1Q8NGR1 328 aa8.6□□□□□ -1.03
USP1-204ENST00000452143 OR10X1Q8NGY0 326 aa8.6□□□□□ -1.03
USP1-204ENST00000452143 CNIH3Q8TBE1 160 aa8.6□□□□□ -1.03
USP1-204ENST00000452143 C4orf36Q96KX1 117 aa8.6□□□□□ -1.03
USP1-204ENST00000452143 NOL4LQ96MY1 436 aaPredicted RBP8.6□□□□□ -1.03
USP1-204ENST00000452143 GON7Q9BXV9 100 aa8.6□□□□□ -1.03
USP1-204ENST00000452143 ING3Q9NXR8 418 aa8.6□□□□□ -1.03
USP1-204ENST00000452143 KIF25Q9UIL4 384 aa8.6□□□□□ -1.03
USP1-204ENST00000452143 PSG11Q9UQ72 335 aa8.6□□□□□ -1.03
USP1-204ENST00000452143 TRAV24A0A0B4J272 114 aa8.59□□□□□ -1.03
USP1-204ENST00000452143 J3QLW9 94 aa8.59□□□□□ -1.03
USP1-204ENST00000452143 AP4M1O00189 453 aa8.59□□□□□ -1.03
USP1-204ENST00000452143 HSPB6O14558 160 aa8.59□□□□□ -1.03
USP1-204ENST00000452143 HSD17B6O14756 317 aa8.59□□□□□ -1.03
USP1-204ENST00000452143 RAMP3O60896 148 aa8.59□□□□□ -1.03
USP1-204ENST00000452143 IGKV1D-33P01593 117 aa8.59□□□□□ -1.03
USP1-204ENST00000452143 IGKV1-33P01594 117 aa8.59□□□□□ -1.03
USP1-204ENST00000452143 CCDC159P0C7I6 412 aa8.59□□□□□ -1.03
USP1-204ENST00000452143 NHLRC4P0CG21 123 aaPredicted RBP8.59□□□□□ -1.03
USP1-204ENST00000452143 ZNF19P17023 458 aa8.59□□□□□ -1.03
USP1-204ENST00000452143 DGCR2P98153 550 aa8.59□□□□□ -1.03
USP1-204ENST00000452143 ZNF816Q0VGE8 651 aaPredicted RBP8.59□□□□□ -1.03
USP1-204ENST00000452143 EBI3Q14213 229 aa8.59□□□□□ -1.03
USP1-204ENST00000452143 ZNF691Q5VV52 312 aa8.59□□□□□ -1.03
USP1-204ENST00000452143 RSBN1Q5VWQ0 802 aaPredicted RBP8.59□□□□□ -1.03
USP1-204ENST00000452143 TEX38Q6PEX7 206 aa8.59□□□□□ -1.03
USP1-204ENST00000452143 RNF144BQ7Z419 303 aa8.59□□□□□ -1.03
USP1-204ENST00000452143 TGIF2LXQ8IUE1 241 aa8.59□□□□□ -1.03
USP1-204ENST00000452143 IZUMO1Q8IYV9 350 aa8.59□□□□□ -1.03
USP1-204ENST00000452143 STPG2Q8N412 459 aa8.59□□□□□ -1.03
USP1-204ENST00000452143 Q8NFD4 153 aa8.59□□□□□ -1.03
USP1-204ENST00000452143 ALG8Q9BVK2 526 aa8.59□□□□□ -1.03
USP1-204ENST00000452143 LIN7CQ9NUP9 197 aaKnown RBP8.59□□□□□ -1.03
USP1-204ENST00000452143 EXOGQ9Y2C4 368 aaKnown RBP8.59□□□□□ -1.03
USP1-204ENST00000452143 ORC6Q9Y5N6 252 aa8.59□□□□□ -1.03
USP1-204ENST00000452143 MAGEB3O15480 346 aa8.58□□□□□ -1.04
USP1-204ENST00000452143 ZFPL1O95159 310 aa8.58□□□□□ -1.04
USP1-204ENST00000452143 ALPLP05186 524 aa8.58□□□□□ -1.04
USP1-204ENST00000452143 RAB3AP20336 220 aa8.58□□□□□ -1.04
USP1-204ENST00000452143 SSTR5P35346 364 aa8.58□□□□□ -1.04
USP1-204ENST00000452143 GNG10P50151 68 aa8.58□□□□□ -1.04
USP1-204ENST00000452143 GALEQ14376 348 aa8.58□□□□□ -1.04
USP1-204ENST00000452143 NHLRC3Q5JS37 347 aa8.58□□□□□ -1.04
USP1-204ENST00000452143 C8orf31Q8N9H6 132 aa8.58□□□□□ -1.04
USP1-204ENST00000452143 OR8U1Q8NH10 309 aa8.58□□□□□ -1.04
USP1-204ENST00000452143 MRGPRDQ8TDS7 321 aa8.58□□□□□ -1.04
USP1-204ENST00000452143 TSEN15Q8WW01 171 aaKnown RBP8.58□□□□□ -1.04
USP1-204ENST00000452143 LEAP2Q969E1 77 aa8.58□□□□□ -1.04
USP1-204ENST00000452143 ABCG5Q9H222 651 aa8.58□□□□□ -1.04
USP1-204ENST00000452143 IFT22Q9H7X7 185 aa8.58□□□□□ -1.04
USP1-204ENST00000452143 DHDHQ9UQ10 334 aa8.58□□□□□ -1.04
USP1-204ENST00000452143 IGHV1-3A0A0C4DH29 117 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 SAC3D1A6NKF1 404 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 CCRL2O00421 344 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 GABRPO00591 440 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 RRP9O43818 475 aaKnown RBP8.57□□□□□ -1.04
USP1-204ENST00000452143 MPZL2O60487 215 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 IGHV3-7P01780 117 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 GAPDHP04406 335 aaKnown RBP8.57□□□□□ -1.04
USP1-204ENST00000452143 VSIG8P0DPA2 414 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 GPR12P47775 334 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 DIAPH2-AS1Q14236 149 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 RSU1Q15404 277 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 ZSCAN26Q16670 478 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 ZNF529Q6P280 563 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 C18orf65Q6ZTR6 163 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 LINC00596Q86U02 117 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 Q8N6K4 173 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 RNF152Q8N8N0 203 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 OR52M1Q8NGK5 317 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 OR5M8Q8NGP6 311 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 OR5AK2Q8NH90 309 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 PLPPR1Q8TBJ4 325 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 TNFAIP8L1Q8WVP5 186 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 LGALS12Q96DT0 336 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 RAX2Q96IS3 184 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 NR1H4Q96RI1 486 aaPredicted RBP8.57□□□□□ -1.04
USP1-204ENST00000452143 GPER1Q99527 375 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 DPCDQ9BVM2 203 aaPredicted RBP8.57□□□□□ -1.04
USP1-204ENST00000452143 FAM118AQ9NWS6 357 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 IL36GQ9NZH8 169 aa8.57□□□□□ -1.04
USP1-204ENST00000452143 SIRT4Q9Y6E7 314 aaPredicted RBP8.57□□□□□ -1.04
USP1-204ENST00000452143 CCL24O00175 119 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms