RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 PMP22Q01453 160 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 RAB32Q13637 225 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 DAZAP2Q15038 168 aaPredicted RBP10.39□□□□□ -0.75
COL27A1-202ENST00000451716 ARL6IP1Q15041 203 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 HIKESHIQ53FT3 197 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 SLC22A25Q6T423 547 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 ASCL4Q6XD76 172 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 MCEMP1Q8IX19 187 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 RAB24Q969Q5 203 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 CPNE2Q96FN4 548 aaPredicted RBP10.39□□□□□ -0.75
COL27A1-202ENST00000451716 NMES1Q9C002 83 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 PRDM14Q9GZV8 571 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 RAB18Q9NP72 206 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 IL36RNQ9UBH0 155 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 DUX4Q9UBX2 424 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 PRR14LQ5THK1 2151 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 A0A0B4J2A0 478 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 TEX13DA0A0J9YY54 714 aaPredicted RBP10.38□□□□□ -0.75
COL27A1-202ENST00000451716 TMEM218A2RU14 115 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 TMEM238C9JI98 176 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 HSPB6O14558 160 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 NME2P1O60361 137 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 ADCYAP1P18509 176 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 NME2P22392 152 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 S100A10P60903 97 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 TRIP6Q15654 476 aaKnown RBP10.38□□□□□ -0.75
COL27A1-202ENST00000451716 PLEKHN1Q494U1 663 aaPredicted RBP10.38□□□□□ -0.75
COL27A1-202ENST00000451716 WDR73Q6P4I2 378 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 COLCA1Q6ZS62 124 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 TMEM200AQ86VY9 491 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 MDS2Q8NDY4 140 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 SPSB4Q96A44 273 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 LINC00470Q9BZP3 86 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 SHPKQ9UHJ6 478 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 ZNF391Q9UJN7 358 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 MGAQ8IWI9 3026 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 MAP1BP46821 2468 aaKnown RBP10.38□□□□□ -0.75
COL27A1-202ENST00000451716 AGAP20933 346 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 CDKN1BP46527 198 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 PRDX4Q13162 271 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 SLC10A1Q14973 349 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 WFDC12Q8WWY7 111 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 FER1L6-AS2Q96M78 137 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 ZNF442Q9H7R0 627 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 SEPSECSQ9HD40 501 aaKnown RBP10.38□□□□□ -0.75
COL27A1-202ENST00000451716 RASL12Q9NYN1 266 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 HSF4Q9ULV5 492 aa10.38□□□□□ -0.75
COL27A1-202ENST00000451716 KLF13Q9Y2Y9 288 aaPredicted RBP10.38□□□□□ -0.75
COL27A1-202ENST00000451716 KLRC4-KLRK1H3BQV0 150 aa10.37□□□□□ -0.75
COL27A1-202ENST00000451716 LILRA1O75019 489 aa10.37□□□□□ -0.75
COL27A1-202ENST00000451716 CA11O75493 328 aa10.37□□□□□ -0.75
COL27A1-202ENST00000451716 WISP2O76076 250 aa10.37□□□□□ -0.75
COL27A1-202ENST00000451716 YIF1AO95070 293 aa10.37□□□□□ -0.75
COL27A1-202ENST00000451716 BCL3P20749 454 aa10.37□□□□□ -0.75
COL27A1-202ENST00000451716 DUSP1P28562 367 aa10.37□□□□□ -0.75
COL27A1-202ENST00000451716 ARG2P78540 354 aa10.37□□□□□ -0.75
COL27A1-202ENST00000451716 PHLDA2Q53GA4 152 aa10.37□□□□□ -0.75
COL27A1-202ENST00000451716 RTL6Q6ICC9 239 aa10.37□□□□□ -0.75
COL27A1-202ENST00000451716 MRPL21Q7Z2W9 205 aaKnown RBP10.37□□□□□ -0.75
COL27A1-202ENST00000451716 NUDT10Q8NFP7 164 aa10.37□□□□□ -0.75
COL27A1-202ENST00000451716 TNFRSF14Q92956 283 aa10.37□□□□□ -0.75
COL27A1-202ENST00000451716 REPIN1Q9BWE0 567 aaKnown RBP10.37□□□□□ -0.75
COL27A1-202ENST00000451716 KMT2EQ8IZD2 1858 aa10.37□□□□□ -0.75
COL27A1-202ENST00000451716 A0A1W2PPQ1 181 aa10.37□□□□□ -0.75
COL27A1-202ENST00000451716 GOSR1O95249 250 aa10.37□□□□□ -0.75
COL27A1-202ENST00000451716 RBMXP38159 391 aaKnown RBP10.37□□□□□ -0.75
COL27A1-202ENST00000451716 RBM11P57052 281 aaKnown RBP10.37□□□□□ -0.75
COL27A1-202ENST00000451716 PIGPP57054 158 aa10.37□□□□□ -0.75
COL27A1-202ENST00000451716 BLOC1S1P78537 153 aa10.37□□□□□ -0.75
COL27A1-202ENST00000451716 HPSE2Q8WWQ2 592 aa10.37□□□□□ -0.75
COL27A1-202ENST00000451716 ZNF552Q9H707 407 aaPredicted RBP10.37□□□□□ -0.75
COL27A1-202ENST00000451716 RYDENQ9NUL5 291 aaKnown RBP10.37□□□□□ -0.75
COL27A1-202ENST00000451716 SPRR3Q9UBC9 169 aa10.37□□□□□ -0.75
COL27A1-202ENST00000451716 MED12LQ86YW9 2145 aa10.37□□□□□ -0.75
COL27A1-202ENST00000451716 GVINP1Q7Z2Y8 2422 aa10.37□□□□□ -0.75
COL27A1-202ENST00000451716 A0A1W2PR80 420 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 NDUFS8O00217 210 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 FCGR2CP31995 323 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 CYCSP99999 105 aaKnown RBP10.36□□□□□ -0.75
COL27A1-202ENST00000451716 MALLQ13021 153 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 RBM39Q14498 530 aaKnown RBP10.36□□□□□ -0.75
COL27A1-202ENST00000451716 NRN1LQ496H8 165 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 SPATA46Q5T0L3 261 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 C14orf79Q96F83 325 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 NECAP2Q9NVZ3 263 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 SPAARA0A1B0GVQ0 90 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 RPL36A-HNRNPH2H7BZ11 118 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 NKX2-8O15522 239 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 PDCD6O75340 191 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 S100A7AQ86SG5 101 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 THNSL2Q86YJ6 484 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 NDUFAF3Q9BU61 184 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 SLC25A32Q9H2D1 315 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 NBEAQ8NFP9 2946 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 ARHGAP21Q5T5U3 1957 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 ZNF732B4DXR9 585 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 IAH1Q2TAA2 248 aaPredicted RBP10.36□□□□□ -0.75
COL27A1-202ENST00000451716 ZNF766Q5HY98 468 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 SGPP2Q8IWX5 399 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 FAM185AQ8N0U4 392 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms