RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 PLGRKTQ9HBL7 147 aa11.84□□□□□ -0.51
USP39-206ENST00000448971 SPACA1Q9HBV2 294 aa11.84□□□□□ -0.51
USP39-206ENST00000448971 NDUFB11Q9NX14 153 aa11.84□□□□□ -0.51
USP39-206ENST00000448971 TAS2R3Q9NYW6 316 aa11.84□□□□□ -0.51
USP39-206ENST00000448971 GHRLQ9UBU3 117 aa11.84□□□□□ -0.51
USP39-206ENST00000448971 IGHV2-26A0A0B4J1V2 119 aa11.83□□□□□ -0.52
USP39-206ENST00000448971 FAM172BPA6NC97 362 aa11.83□□□□□ -0.52
USP39-206ENST00000448971 ZNF729A6NN14 1252 aaPredicted RBP11.83□□□□□ -0.52
USP39-206ENST00000448971 ODF3BA8MYP8 253 aa11.83□□□□□ -0.52
USP39-206ENST00000448971 MPIG6BO95866 241 aa11.83□□□□□ -0.52
USP39-206ENST00000448971 MDKP21741 143 aaPredicted RBP11.83□□□□□ -0.52
USP39-206ENST00000448971 OMGP23515 440 aa11.83□□□□□ -0.52
USP39-206ENST00000448971 HTR2CP28335 458 aa11.83□□□□□ -0.52
USP39-206ENST00000448971 SSX1Q16384 188 aa11.83□□□□□ -0.52
USP39-206ENST00000448971 RSBN1Q5VWQ0 802 aaPredicted RBP11.83□□□□□ -0.52
USP39-206ENST00000448971 ZNF626Q68DY1 528 aa11.83□□□□□ -0.52
USP39-206ENST00000448971 OR52W1Q6IF63 320 aa11.83□□□□□ -0.52
USP39-206ENST00000448971 TMEM91Q6ZNR0 172 aa11.83□□□□□ -0.52
USP39-206ENST00000448971 LHFPL4Q7Z7J7 247 aa11.83□□□□□ -0.52
USP39-206ENST00000448971 LYPD6Q86Y78 171 aa11.83□□□□□ -0.52
USP39-206ENST00000448971 SPARTQ8N0X7 666 aa11.83□□□□□ -0.52
USP39-206ENST00000448971 BEND2Q8NDZ0 799 aa11.83□□□□□ -0.52
USP39-206ENST00000448971 TMEM104Q8NE00 496 aa11.83□□□□□ -0.52
USP39-206ENST00000448971 OR6M1Q8NGM8 313 aa11.83□□□□□ -0.52
USP39-206ENST00000448971 OR13A1Q8NGR1 328 aa11.83□□□□□ -0.52
USP39-206ENST00000448971 MRGPRDQ8TDS7 321 aa11.83□□□□□ -0.52
USP39-206ENST00000448971 CLEC7AQ9BXN2 247 aa11.83□□□□□ -0.52
USP39-206ENST00000448971 TMEM133Q9H2Q1 129 aa11.83□□□□□ -0.52
USP39-206ENST00000448971 TBL2Q9Y4P3 447 aaKnown RBP11.83□□□□□ -0.52
USP39-206ENST00000448971 MMP24Q9Y5R2 645 aa11.83□□□□□ -0.52
USP39-206ENST00000448971 TMEM30CPA0ZSE6 113 aa11.82□□□□□ -0.52
USP39-206ENST00000448971 FAM181BA6NEQ2 426 aa11.82□□□□□ -0.52
USP39-206ENST00000448971 CCRL2O00421 344 aa11.82□□□□□ -0.52
USP39-206ENST00000448971 MMP23AO75900 390 aa11.82□□□□□ -0.52
USP39-206ENST00000448971 MYL9P24844 172 aa11.82□□□□□ -0.52
USP39-206ENST00000448971 LRRC75BQ2VPJ9 315 aa11.82□□□□□ -0.52
USP39-206ENST00000448971 PLA1AQ53H76 456 aa11.82□□□□□ -0.52
USP39-206ENST00000448971 UBE2UQ5VVX9 321 aa11.82□□□□□ -0.52
USP39-206ENST00000448971 ZNF773Q6PK81 442 aa11.82□□□□□ -0.52
USP39-206ENST00000448971 HEPN1Q6WQI6 88 aa11.82□□□□□ -0.52
USP39-206ENST00000448971 ZNF565Q8N9K5 539 aa11.82□□□□□ -0.52
USP39-206ENST00000448971 OR5R1Q8NH85 324 aa11.82□□□□□ -0.52
USP39-206ENST00000448971 NDNFQ8TB73 568 aa11.82□□□□□ -0.52
USP39-206ENST00000448971 DYRK2Q92630 601 aa11.82□□□□□ -0.52
USP39-206ENST00000448971 CORO2AQ92828 525 aa11.82□□□□□ -0.52
USP39-206ENST00000448971 Q96M66 194 aa11.82□□□□□ -0.52
USP39-206ENST00000448971 TMEM59Q9BXS4 323 aa11.82□□□□□ -0.52
USP39-206ENST00000448971 KCNK15Q9H427 330 aa11.82□□□□□ -0.52
USP39-206ENST00000448971 CALYQ9NYX4 217 aa11.82□□□□□ -0.52
USP39-206ENST00000448971 VPREB3Q9UKI3 123 aa11.82□□□□□ -0.52
USP39-206ENST00000448971 AK6Q9Y3D8 172 aaKnown RBP11.82□□□□□ -0.52
USP39-206ENST00000448971 MCRIP1C9JLW8 97 aa11.81□□□□□ -0.52
USP39-206ENST00000448971 H3BUX3 64 aa11.81□□□□□ -0.52
USP39-206ENST00000448971 AIPO00170 330 aa11.81□□□□□ -0.52
USP39-206ENST00000448971 GPR137BO60478 399 aa11.81□□□□□ -0.52
USP39-206ENST00000448971 IL1AP01583 271 aa11.81□□□□□ -0.52
USP39-206ENST00000448971 NFYBP25208 207 aa11.81□□□□□ -0.52
USP39-206ENST00000448971 PAX6P26367 422 aa11.81□□□□□ -0.52
USP39-206ENST00000448971 PAX5Q02548 391 aa11.81□□□□□ -0.52
USP39-206ENST00000448971 SRSF4Q08170 494 aaKnown RBP11.81□□□□□ -0.52
USP39-206ENST00000448971 RBM39Q14498 530 aaKnown RBP11.81□□□□□ -0.52
USP39-206ENST00000448971 LTC4SQ16873 150 aa11.81□□□□□ -0.52
USP39-206ENST00000448971 KCTD21Q4G0X4 260 aa11.81□□□□□ -0.52
USP39-206ENST00000448971 NKAPLQ5M9Q1 402 aa11.81□□□□□ -0.52
USP39-206ENST00000448971 C1orf100Q5SVJ3 147 aa11.81□□□□□ -0.52
USP39-206ENST00000448971 RAB12Q6IQ22 244 aa11.81□□□□□ -0.52
USP39-206ENST00000448971 OR11H6Q8NGC7 330 aa11.81□□□□□ -0.52
USP39-206ENST00000448971 ETAA1Q9NY74 926 aa11.81□□□□□ -0.52
USP39-206ENST00000448971 RCC2Q9P258 522 aaKnown RBP11.81□□□□□ -0.52
USP39-206ENST00000448971 LRRC42Q9Y546 428 aa11.81□□□□□ -0.52
USP39-206ENST00000448971 TRAV39A0A0B4J263 110 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 KBTBD11-OT1A0A1B0GTJ5 212 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 FAM90A10PA6NDY2 464 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 FAM90A18PA6NE21 464 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 FAM90A16PA6NEW6 464 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 FAM90A20PA6NIJ5 464 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 FAM90A8PA6NJQ4 464 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 FAM90A7PA6NKC0 464 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 FAM90A22PA8MWA6 464 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 FAM90A12PA8MX19 464 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 FAM90A5PA8MXJ8 464 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 FAM90A23PA8MXZ1 464 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 SLC22A1O15245 554 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 BPNT1O95861 308 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 FAM90A15PP0C7V4 464 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 FAM90A13PP0C7W8 464 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 FAM90A14PP0C7W9 464 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 FAM90A24PP0C7X0 464 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 VSIG8P0DPA2 414 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 SSTR5P35346 364 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 GDNFP39905 211 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 P2RY14Q15391 338 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 NEDD8Q15843 81 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 FAM189A2Q15884 450 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 RAB11BQ15907 218 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 C17orf58Q2M2W7 97 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 DHRS7BQ6IAN0 325 aaPredicted RBP11.8□□□□□ -0.52
USP39-206ENST00000448971 SLC35E4Q6ICL7 350 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 OR10K2Q6IF99 312 aa11.8□□□□□ -0.52
USP39-206ENST00000448971 BAIAP2L2Q6UXY1 529 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms