RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 SNRPEP62304 92 aaKnown RBP12.63□□□□□ -0.39
SF1-211ENST00000448404 DEFB109BQ30KR1 87 aa12.63□□□□□ -0.39
SF1-211ENST00000448404 CCDC36Q8IYA8 594 aa12.63□□□□□ -0.39
SF1-211ENST00000448404 SUMF2Q8NBJ7 301 aa12.63□□□□□ -0.39
SF1-211ENST00000448404 PLCE1Q9P212 2302 aa12.62□□□□□ -0.39
SF1-211ENST00000448404 NKX2-6A6NCS4 301 aa12.62□□□□□ -0.39
SF1-211ENST00000448404 ZNF724A8MTY0 619 aa12.62□□□□□ -0.39
SF1-211ENST00000448404 K7EPK0 472 aa12.62□□□□□ -0.39
SF1-211ENST00000448404 CDIPTO14735 213 aa12.62□□□□□ -0.39
SF1-211ENST00000448404 GRPP07492 148 aa12.62□□□□□ -0.39
SF1-211ENST00000448404 FAM157CP0CG43 387 aa12.62□□□□□ -0.39
SF1-211ENST00000448404 LPAR6P43657 344 aa12.62□□□□□ -0.39
SF1-211ENST00000448404 FAM71E2Q8N5Q1 922 aa12.62□□□□□ -0.39
SF1-211ENST00000448404 MSI2Q96DH6 328 aaKnown RBP12.62□□□□□ -0.39
SF1-211ENST00000448404 RBMXL1Q96E39 390 aaKnown RBP12.62□□□□□ -0.39
SF1-211ENST00000448404 WFDC1Q9HC57 220 aa12.62□□□□□ -0.39
SF1-211ENST00000448404 RCL1Q9Y2P8 373 aaKnown RBP12.62□□□□□ -0.39
SF1-211ENST00000448404 ZZEF1O43149 2961 aa12.62□□□□□ -0.39
SF1-211ENST00000448404 TRAV24A0A0B4J272 114 aa12.62□□□□□ -0.39
SF1-211ENST00000448404 BLOC1S1P78537 153 aa12.62□□□□□ -0.39
SF1-211ENST00000448404 MST1LQ2TV78 715 aa12.62□□□□□ -0.39
SF1-211ENST00000448404 OR5P3Q8WZ94 311 aa12.62□□□□□ -0.39
SF1-211ENST00000448404 HIST1H2AAQ96QV6 131 aa12.62□□□□□ -0.39
SF1-211ENST00000448404 SH3BGRL3Q9H299 93 aa12.62□□□□□ -0.39
SF1-211ENST00000448404 NIT2Q9NQR4 276 aa12.62□□□□□ -0.39
SF1-211ENST00000448404 OR1A1Q9P1Q5 309 aa12.62□□□□□ -0.39
SF1-211ENST00000448404 TINAGQ9UJW2 476 aa12.62□□□□□ -0.39
SF1-211ENST00000448404 AMDHD2Q9Y303 409 aa12.62□□□□□ -0.39
SF1-211ENST00000448404 FOSL1P15407 271 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 MPV17P39210 176 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 PLA2G5P39877 138 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 FGF12P61328 243 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 ARL6IP1Q15041 203 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 RNPS1Q15287 305 aaKnown RBP12.61□□□□□ -0.39
SF1-211ENST00000448404 TBC1D26Q86UD7 250 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 SPAG16Q8N0X2 631 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 RXFP4Q8TDU9 374 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 MOB3AQ96BX8 217 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 PRRX2Q99811 253 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 TAF9BQ9HBM6 251 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 ANKRD30BLA7E2S9 258 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 PROB1E7EW31 1015 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 WNT9BO14905 357 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 IFNA21P01568 189 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 NFYBP25208 207 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 GLP1RP43220 463 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 SURF2Q15527 256 aaPredicted RBP12.61□□□□□ -0.39
SF1-211ENST00000448404 MKXQ8IYA7 352 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 OR51H1Q8NH63 302 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 KIRREL1Q96J84 757 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 AQP10Q96PS8 301 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 TLNRD1Q9H1K6 362 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 DECR2Q9NUI1 292 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 OR14J1Q9UGF5 321 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 KCNIP3Q9Y2W7 256 aa12.61□□□□□ -0.39
SF1-211ENST00000448404 USF3Q68DE3 2245 aa12.6□□□□□ -0.39
SF1-211ENST00000448404 CA11O75493 328 aa12.6□□□□□ -0.39
SF1-211ENST00000448404 DEDDO75618 318 aa12.6□□□□□ -0.39
SF1-211ENST00000448404 CXorf66Q5JRM2 361 aaPredicted RBP12.6□□□□□ -0.39
SF1-211ENST00000448404 RPRMLQ8N4K4 120 aa12.6□□□□□ -0.39
SF1-211ENST00000448404 Q9N2K0 584 aa12.6□□□□□ -0.39
SF1-211ENST00000448404 IL36GQ9NZH8 169 aa12.6□□□□□ -0.39
SF1-211ENST00000448404 ZNF391Q9UJN7 358 aa12.6□□□□□ -0.39
SF1-211ENST00000448404 SPTA1P02549 2419 aa12.6□□□□□ -0.39
SF1-211ENST00000448404 PKDREJQ9NTG1 2253 aa12.6□□□□□ -0.39
SF1-211ENST00000448404 MED6O75586 246 aa12.6□□□□□ -0.39
SF1-211ENST00000448404 EPHA1P21709 976 aa12.6□□□□□ -0.39
SF1-211ENST00000448404 ARR3P36575 388 aa12.6□□□□□ -0.39
SF1-211ENST00000448404 NPBWR1P48145 328 aa12.6□□□□□ -0.39
SF1-211ENST00000448404 AKIRIN2Q53H80 203 aa12.6□□□□□ -0.39
SF1-211ENST00000448404 AVPI1Q5T686 147 aa12.6□□□□□ -0.39
SF1-211ENST00000448404 C9orf106Q8NAJ2 232 aa12.6□□□□□ -0.39
SF1-211ENST00000448404 HSD17B11Q8NBQ5 300 aa12.6□□□□□ -0.39
SF1-211ENST00000448404 CCDC54Q8NEL0 328 aa12.6□□□□□ -0.39
SF1-211ENST00000448404 SLC25A40Q8TBP6 338 aa12.6□□□□□ -0.39
SF1-211ENST00000448404 PIGMQ9H3S5 423 aa12.6□□□□□ -0.39
SF1-211ENST00000448404 RNF122Q9H9V4 155 aa12.6□□□□□ -0.39
SF1-211ENST00000448404 ASCL3Q9NQ33 180 aa12.6□□□□□ -0.39
SF1-211ENST00000448404 UFSP2Q9NUQ7 469 aa12.6□□□□□ -0.39
SF1-211ENST00000448404 C9JQL5 133 aa12.59□□□□□ -0.39
SF1-211ENST00000448404 SS18L1O75177 396 aaPredicted RBP12.59□□□□□ -0.39
SF1-211ENST00000448404 CLINT1Q14677 625 aa12.59□□□□□ -0.39
SF1-211ENST00000448404 PPA1Q15181 289 aa12.59□□□□□ -0.39
SF1-211ENST00000448404 FBXW12Q6X9E4 464 aa12.59□□□□□ -0.39
SF1-211ENST00000448404 LIAT1Q6ZQX7 453 aa12.59□□□□□ -0.39
SF1-211ENST00000448404 TPRX1Q8N7U7 411 aa12.59□□□□□ -0.39
SF1-211ENST00000448404 ZDHHC11Q9H8X9 412 aa12.59□□□□□ -0.39
SF1-211ENST00000448404 C3orf85A0A1B0GTC6 90 aa12.59□□□□□ -0.39
SF1-211ENST00000448404 MPPED1O15442 326 aa12.59□□□□□ -0.39
SF1-211ENST00000448404 TREM1Q9NP99 234 aa12.59□□□□□ -0.39
SF1-211ENST00000448404 FAM24AA6NFZ4 105 aa12.58□□□□□ -0.39
SF1-211ENST00000448404 H3BP45 60 aa12.58□□□□□ -0.39
SF1-211ENST00000448404 K7EM74 188 aa12.58□□□□□ -0.39
SF1-211ENST00000448404 NAPSAO96009 420 aa12.58□□□□□ -0.39
SF1-211ENST00000448404 S100A9P06702 114 aaKnown RBP12.58□□□□□ -0.39
SF1-211ENST00000448404 RTL6Q6ICC9 239 aa12.58□□□□□ -0.39
SF1-211ENST00000448404 TMEM211Q6ICI0 200 aa12.58□□□□□ -0.39
SF1-211ENST00000448404 FAM58AQ8N1B3 248 aa12.58□□□□□ -0.39
SF1-211ENST00000448404 PLPPR1Q8TBJ4 325 aa12.58□□□□□ -0.39
SF1-211ENST00000448404 MRPL30Q8TCC3 161 aaKnown RBP12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms