RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 RCVRNP35243 200 aa16.22■□□□□ 0.19
SGCE-207ENST00000447873 GLIPR1P48060 266 aa16.22■□□□□ 0.19
SGCE-207ENST00000447873 ZNF57Q68EA5 555 aaPredicted RBP16.22■□□□□ 0.19
SGCE-207ENST00000447873 HOGA1Q86XE5 327 aa16.22■□□□□ 0.19
SGCE-207ENST00000447873 FGFRL1Q8N441 504 aa16.22■□□□□ 0.19
SGCE-207ENST00000447873 TOMM5Q8N4H5 51 aa16.22■□□□□ 0.19
SGCE-207ENST00000447873 TPRX1Q8N7U7 411 aa16.22■□□□□ 0.19
SGCE-207ENST00000447873 CCDC107Q8WV48 283 aa16.22■□□□□ 0.19
SGCE-207ENST00000447873 MAFIPQ8WZ33 124 aa16.22■□□□□ 0.19
SGCE-207ENST00000447873 NEIL1Q96FI4 390 aaPredicted RBP16.22■□□□□ 0.19
SGCE-207ENST00000447873 TAS2R8Q9NYW2 309 aa16.22■□□□□ 0.19
SGCE-207ENST00000447873 WNT2P09544 360 aa16.21■□□□□ 0.19
SGCE-207ENST00000447873 CSF1P09603 554 aa16.21■□□□□ 0.19
SGCE-207ENST00000447873 ERP29P30040 261 aaKnown RBP16.21■□□□□ 0.19
SGCE-207ENST00000447873 P2RX3P56373 397 aa16.21■□□□□ 0.19
SGCE-207ENST00000447873 CLEC12BQ2HXU8 276 aa16.21■□□□□ 0.19
SGCE-207ENST00000447873 BEST4Q8NFU0 473 aa16.21■□□□□ 0.19
SGCE-207ENST00000447873 PATZ1Q9HBE1 687 aaKnown RBP16.21■□□□□ 0.19
SGCE-207ENST00000447873 PALMDQ9NP74 551 aa16.21■□□□□ 0.19
SGCE-207ENST00000447873 CSMD2Q7Z408 3487 aa16.21■□□□□ 0.19
SGCE-207ENST00000447873 KIAA2026Q5HYC2 2103 aa16.21■□□□□ 0.19
SGCE-207ENST00000447873 MAP1AP78559 2803 aaPredicted RBP16.21■□□□□ 0.19
SGCE-207ENST00000447873 TRBV6-6A0A0A6YYG2 114 aa16.21■□□□□ 0.18
SGCE-207ENST00000447873 POM121CA8CG34 1229 aa16.21■□□□□ 0.18
SGCE-207ENST00000447873 ECDO95905 644 aaPredicted RBP16.21■□□□□ 0.18
SGCE-207ENST00000447873 HLA-DMAP28067 261 aa16.21■□□□□ 0.18
SGCE-207ENST00000447873 AP3S2P59780 193 aa16.21■□□□□ 0.18
SGCE-207ENST00000447873 IFITM3Q01628 133 aa16.21■□□□□ 0.18
SGCE-207ENST00000447873 STEAP3Q658P3 488 aa16.21■□□□□ 0.18
SGCE-207ENST00000447873 OR52W1Q6IF63 320 aa16.21■□□□□ 0.18
SGCE-207ENST00000447873 Q9N2K0 584 aa16.21■□□□□ 0.18
SGCE-207ENST00000447873 CLN8Q9UBY8 286 aa16.21■□□□□ 0.18
SGCE-207ENST00000447873 ANAPC10Q9UM13 185 aa16.21■□□□□ 0.18
SGCE-207ENST00000447873 DSCAML1Q8TD84 2053 aa16.2■□□□□ 0.18
SGCE-207ENST00000447873 IGHV4-30-2A0A087WSY4 118 aa16.2■□□□□ 0.18
SGCE-207ENST00000447873 TRAV39A0A0B4J263 110 aa16.2■□□□□ 0.18
SGCE-207ENST00000447873 LINC00854A0A1B0GVQ3 168 aa16.2■□□□□ 0.18
SGCE-207ENST00000447873 ODAMA1E959 279 aa16.2■□□□□ 0.18
SGCE-207ENST00000447873 FCN3O75636 299 aa16.2■□□□□ 0.18
SGCE-207ENST00000447873 RCC1P18754 421 aaPredicted RBP16.2■□□□□ 0.18
SGCE-207ENST00000447873 TAS2R19P59542 299 aa16.2■□□□□ 0.18
SGCE-207ENST00000447873 SRSF7Q16629 238 aaKnown RBP eCLIP16.2■□□□□ 0.18
SGCE-207ENST00000447873 ZNF841Q6ZN19 808 aa16.2■□□□□ 0.18
SGCE-207ENST00000447873 Q6ZPA2 131 aa16.2■□□□□ 0.18
SGCE-207ENST00000447873 MOB1BQ7L9L4 216 aa16.2■□□□□ 0.18
SGCE-207ENST00000447873 H1FXQ92522 213 aaKnown RBP16.2■□□□□ 0.18
SGCE-207ENST00000447873 ZNF286AQ9HBT8 521 aa16.2■□□□□ 0.18
SGCE-207ENST00000447873 ZNF107Q9UII5 783 aaPredicted RBP16.2■□□□□ 0.18
SGCE-207ENST00000447873 ANKRD20A5PA0PJZ0 165 aa16.19■□□□□ 0.18
SGCE-207ENST00000447873 VWC2LB2RUY7 222 aa16.19■□□□□ 0.18
SGCE-207ENST00000447873 ZNF736B4DX44 427 aaPredicted RBP16.19■□□□□ 0.18
SGCE-207ENST00000447873 GPR37O15354 613 aa16.19■□□□□ 0.18
SGCE-207ENST00000447873 NAT1P18440 290 aa16.19■□□□□ 0.18
SGCE-207ENST00000447873 NPY4RP50391 375 aa16.19■□□□□ 0.18
SGCE-207ENST00000447873 ZNF880Q6PDB4 577 aa16.19■□□□□ 0.18
SGCE-207ENST00000447873 LYSMD2Q8IV50 215 aa16.19■□□□□ 0.18
SGCE-207ENST00000447873 ZNF565Q8N9K5 539 aa16.19■□□□□ 0.18
SGCE-207ENST00000447873 SNAPC3Q92966 411 aa16.19■□□□□ 0.18
SGCE-207ENST00000447873 NCOR1P1Q9H4R4 102 aa16.19■□□□□ 0.18
SGCE-207ENST00000447873 MBNL3Q9NUK0 354 aaKnown RBP16.19■□□□□ 0.18
SGCE-207ENST00000447873 MGAT4AQ9UM21 535 aa16.19■□□□□ 0.18
SGCE-207ENST00000447873 IGKV1D-8A0A087WSZ0 117 aa16.18■□□□□ 0.18
SGCE-207ENST00000447873 F5H0A9 414 aaPredicted RBP16.18■□□□□ 0.18
SGCE-207ENST00000447873 GNB2P62879 340 aa16.18■□□□□ 0.18
SGCE-207ENST00000447873 KLF9Q13886 244 aaPredicted RBP16.18■□□□□ 0.18
SGCE-207ENST00000447873 CHRFAM7AQ494W8 412 aa16.18■□□□□ 0.18
SGCE-207ENST00000447873 Q6ZS49 121 aa16.18■□□□□ 0.18
SGCE-207ENST00000447873 TMEM229BQ8NBD8 167 aa16.18■□□□□ 0.18
SGCE-207ENST00000447873 CLDND2Q8NHS1 167 aa16.18■□□□□ 0.18
SGCE-207ENST00000447873 MRGPRDQ8TDS7 321 aa16.18■□□□□ 0.18
SGCE-207ENST00000447873 COX4I2Q96KJ9 171 aa16.18■□□□□ 0.18
SGCE-207ENST00000447873 DCTN5Q9BTE1 182 aa16.18■□□□□ 0.18
SGCE-207ENST00000447873 KCNIP1Q9NZI2 227 aa16.18■□□□□ 0.18
SGCE-207ENST00000447873 OR6C3Q9NZP0 311 aa16.18■□□□□ 0.18
SGCE-207ENST00000447873 ANXA10Q9UJ72 324 aa16.18■□□□□ 0.18
SGCE-207ENST00000447873 ASH1LQ9NR48 2969 aaKnown RBP16.18■□□□□ 0.18
SGCE-207ENST00000447873 KIR2DS1A0A191URI9 304 aa16.17■□□□□ 0.18
SGCE-207ENST00000447873 TRDCB7Z8K6 153 aa16.17■□□□□ 0.18
SGCE-207ENST00000447873 IGHV2-5P01817 119 aa16.17■□□□□ 0.18
SGCE-207ENST00000447873 CD3DP04234 171 aa16.17■□□□□ 0.18
SGCE-207ENST00000447873 GLP1RP43220 463 aa16.17■□□□□ 0.18
SGCE-207ENST00000447873 KIR2DS4P43632 304 aa16.17■□□□□ 0.18
SGCE-207ENST00000447873 ARPC4P59998 168 aa16.17■□□□□ 0.18
SGCE-207ENST00000447873 SEC61A1P61619 476 aaKnown RBP16.17■□□□□ 0.18
SGCE-207ENST00000447873 RPL31P62899 125 aaKnown RBP16.17■□□□□ 0.18
SGCE-207ENST00000447873 KIR2DS1Q14954 304 aa16.17■□□□□ 0.18
SGCE-207ENST00000447873 C6orf183Q5T699 404 aa16.17■□□□□ 0.18
SGCE-207ENST00000447873 WDR25Q64LD2 544 aaPredicted RBP16.17■□□□□ 0.18
SGCE-207ENST00000447873 OR13A1Q8NGR1 328 aa16.17■□□□□ 0.18
SGCE-207ENST00000447873 MALRD1Q5VYJ5 2156 aa16.17■□□□□ 0.18
SGCE-207ENST00000447873 hADV38S2A0JD32 116 aa16.17■□□□□ 0.18
SGCE-207ENST00000447873 MEX3AA1L020 520 aaKnown RBP16.17■□□□□ 0.18
SGCE-207ENST00000447873 AKAIN1P0CW23 69 aa16.17■□□□□ 0.18
SGCE-207ENST00000447873 SLC25A16P16260 332 aa16.17■□□□□ 0.18
SGCE-207ENST00000447873 TAS2R46P59540 309 aa16.17■□□□□ 0.18
SGCE-207ENST00000447873 DEFA1P59665 94 aa16.17■□□□□ 0.18
SGCE-207ENST00000447873 DEFA3P59666 94 aa16.17■□□□□ 0.18
SGCE-207ENST00000447873 MEF2CQ06413 473 aaPredicted RBP16.17■□□□□ 0.18
SGCE-207ENST00000447873 ESCO2Q56NI9 601 aa16.17■□□□□ 0.18
SGCE-207ENST00000447873 Q5PR19 223 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms