RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	EIF5A	P63241	154 aa	Known RBP	10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	GNMT	Q14749	295 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	RHEB	Q15382	184 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	GPR157	Q5UAW9	335 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	ZNF695	Q8IW36	515 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	ZNF441	Q8N8Z8	693 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	HPSE2	Q8WWQ2	592 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	OIT3	Q8WWZ8	545 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	ASB13	Q8WXK3	278 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	PLPPR2	Q96GM1	343 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	SGCZ	Q96LD1	299 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	IGSF23	A1L1A6	192 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	SCT	P09683	121 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	RPS23	P62266	143 aa	Known RBP	10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	MRPS34	P82930	218 aa	Known RBP	10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	TLE4	Q04727	773 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	ENDOG	Q14249	297 aa	Known RBP	10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	WDR25	Q64LD2	544 aa	Predicted RBP	10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	HLA-C	Q95604	372 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	RAB39B	Q96DA2	213 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	OXGR1	Q96P68	337 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	DNAJC4	Q9NNZ3	241 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	PTRH2	Q9Y3E5	179 aa	Known RBP	10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	ADAMTS9	Q9P2N4	1935 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	PCNX1	Q96RV3	2341 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312		A0A1W2PPQ1	181 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	IFNL4	K9M1U5	179 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	ST8SIA3	O43173	380 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	DHH	O43323	396 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	ZFAND5	O76080	213 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	SELE	P16581	610 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	CCR5	P51681	352 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	CCL7	P80098	99 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	BEND2	Q8NDZ0	799 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	GJC3	Q8NFK1	279 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	OR2M3	Q8NG83	312 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	SAT2	Q96F10	170 aa	Predicted RBP	10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	TAAR9	Q96RI9	348 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	RSG1	Q9BU20	258 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	NAA60	Q9H7X0	242 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	HEATR1	Q9H583	2144 aa	Known RBP	10.84	□□□□□ -0.67
DDR1-238	ENST00000446312		A0A1W2PR77	199 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312		H3BQ15	152 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	CXCL13	O43927	109 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	THBS4	P35443	961 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	DYNLT3	P51808	116 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	CD81	P60033	236 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	EWSR1	Q01844	656 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	SPINK9	Q5DT21	86 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	OPN5	Q6U736	354 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	SMIM15	Q7Z3B0	74 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	HIST3H2BB	Q8N257	126 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	TMEM171	Q8WVE6	324 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	DIRC2	Q96SL1	478 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	PARP11	Q9NR21	331 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	SLC7A10	Q9NS82	523 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	HS3ST3B1	Q9Y662	390 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312		A0A0J9YW62	118 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	CRYM-AS1	A6NIL9	109 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	HSBP1L1	C9JCN9	74 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	AQP7	O14520	342 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	PTBP3	O95758	552 aa	Known RBP	10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	ZNF92	Q03936	586 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	SPATA46	Q5T0L3	261 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	D2HGDH	Q8N465	521 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	OR1J1	Q8NGS3	322 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	SRXN1	Q9BYN0	137 aa		10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	MRPS18C	Q9Y3D5	142 aa	Known RBP	10.84	□□□□□ -0.67
DDR1-238	ENST00000446312	BLACE	A4D250	179 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	IGHM	P01871	453 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	CCL4	P13236	92 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	TBP	P20226	339 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	PTGDS	P41222	190 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	PTTG1IP	P53801	180 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	RND3	P61587	244 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	DLK1	P80370	383 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	TESK1	Q15569	626 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	OR14L1P	Q8NHC6	308 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	HAS2	Q92819	552 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	TWSG1	Q9GZX9	223 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	SLC35B3	Q9H1N7	401 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	CCL28	Q9NRJ3	127 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	NECAP2	Q9NVZ3	263 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	RNF24	Q9Y225	148 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	CHTOP	Q9Y3Y2	248 aa	Known RBP	10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	TIMM10B	Q9Y5J6	103 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312		E5RGE8	158 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	BCAT2	O15382	392 aa	Predicted RBP	10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	HIST1H2BK	O60814	126 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	NRAS	P01111	189 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	HIST1H2BJ	P06899	126 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	METTL15P1	P0C7V9	234 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	HIST1H2BO	P23527	126 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	HIST1H2BB	P33778	126 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	NKX2-1	P43699	371 aa	Predicted RBP	10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	FOXG1	P55316	489 aa	Predicted RBP	10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	HIST1H2BD	P58876	126 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	HIST1H2BC	P62807	126 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	RBX1	P62877	108 aa		10.83	□□□□□ -0.68
DDR1-238	ENST00000446312	TMEM187	Q14656	261 aa		10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms