RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.89□□□□□ -0.67
TIMP1-204ENST00000445623 C19orf12Q9NSK7 152 aa10.89□□□□□ -0.67
TIMP1-204ENST00000445623 RABL2AQ9UBK7 228 aaPredicted RBP10.89□□□□□ -0.67
TIMP1-204ENST00000445623 EXTL2Q9UBQ6 330 aa10.89□□□□□ -0.67
TIMP1-204ENST00000445623 KIF25Q9UIL4 384 aa10.89□□□□□ -0.67
TIMP1-204ENST00000445623 TRAPPC2LQ9UL33 140 aa10.89□□□□□ -0.67
TIMP1-204ENST00000445623 RABL2BQ9UNT1 228 aa10.89□□□□□ -0.67
TIMP1-204ENST00000445623 UBE2J1Q9Y385 318 aaPredicted RBP10.89□□□□□ -0.67
TIMP1-204ENST00000445623 LINC00312Q9Y6C7 94 aa10.89□□□□□ -0.67
TIMP1-204ENST00000445623 AKAP9Q99996 3911 aa10.88□□□□□ -0.67
TIMP1-204ENST00000445623 DSCAML1Q8TD84 2053 aa10.88□□□□□ -0.67
TIMP1-204ENST00000445623 KIR2DS1A0A191URI9 304 aa10.88□□□□□ -0.67
TIMP1-204ENST00000445623 TPPPO94811 219 aa10.88□□□□□ -0.67
TIMP1-204ENST00000445623 ZNF16P17020 682 aaPredicted RBP10.88□□□□□ -0.67
TIMP1-204ENST00000445623 GLP1RP43220 463 aa10.88□□□□□ -0.67
TIMP1-204ENST00000445623 GLIPR1P48060 266 aa10.88□□□□□ -0.67
TIMP1-204ENST00000445623 GNG2P59768 71 aa10.88□□□□□ -0.67
TIMP1-204ENST00000445623 ZNF260Q3ZCT1 412 aa10.88□□□□□ -0.67
TIMP1-204ENST00000445623 C6orf183Q5T699 404 aa10.88□□□□□ -0.67
TIMP1-204ENST00000445623 DCAF12L2Q5VW00 463 aa10.88□□□□□ -0.67
TIMP1-204ENST00000445623 TRAT1Q6PIZ9 186 aa10.88□□□□□ -0.67
TIMP1-204ENST00000445623 MOB1BQ7L9L4 216 aa10.88□□□□□ -0.67
TIMP1-204ENST00000445623 LAX1Q8IWV1 398 aa10.88□□□□□ -0.67
TIMP1-204ENST00000445623 KIR3DL3Q8N743 410 aa10.88□□□□□ -0.67
TIMP1-204ENST00000445623 TPRX1Q8N7U7 411 aa10.88□□□□□ -0.67
TIMP1-204ENST00000445623 LY6G5BQ8NDX9 201 aa10.88□□□□□ -0.67
TIMP1-204ENST00000445623 DIRAS2Q96HU8 199 aa10.88□□□□□ -0.67
TIMP1-204ENST00000445623 WDFY2Q96P53 400 aa10.88□□□□□ -0.67
TIMP1-204ENST00000445623 GAL3ST2Q9H3Q3 398 aa10.88□□□□□ -0.67
TIMP1-204ENST00000445623 ZMAT3Q9HA38 289 aaKnown RBP10.88□□□□□ -0.67
TIMP1-204ENST00000445623 HIF1ANQ9NWT6 349 aa10.88□□□□□ -0.67
TIMP1-204ENST00000445623 AK3Q9UIJ7 227 aa10.88□□□□□ -0.67
TIMP1-204ENST00000445623 MGAT4AQ9UM21 535 aa10.88□□□□□ -0.67
TIMP1-204ENST00000445623 VPS13CQ709C8 3753 aa10.88□□□□□ -0.67
TIMP1-204ENST00000445623 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.87□□□□□ -0.67
TIMP1-204ENST00000445623 ABCA2Q9BZC7 2435 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 FLNAP21333 2647 aaKnown RBP10.87□□□□□ -0.67
TIMP1-204ENST00000445623 TMEM235A6NFC5 223 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 J3QLI3 93 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 CD5LO43866 347 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 MT-ND4P03905 459 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 GZMHP20718 246 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 TAS2R20P59543 309 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 HACD4Q5VWC8 232 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 TMEM200BQ69YZ2 307 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 CNIH2Q6PI25 160 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 IZUMO1Q8IYV9 350 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 GAPTQ8N292 157 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 DYRK2Q92630 601 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 CORO2AQ92828 525 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 ZNF714Q96N38 554 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 TMUB1Q9BVT8 246 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 MIXL1Q9H2W2 232 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 AUNIPQ9H7T9 357 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 MMP26Q9NRE1 261 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 TAS2R3Q9NYW6 316 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 PTTG2Q9NZH5 202 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 KCNIP1Q9NZI2 227 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 ONECUT1Q9UBC0 465 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 KCNS2Q9ULS6 477 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 MRPS7Q9Y2R9 242 aaKnown RBP10.87□□□□□ -0.67
TIMP1-204ENST00000445623 KCNK7Q9Y2U2 307 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 INSIG2Q9Y5U4 225 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 KPTNQ9Y664 436 aa10.87□□□□□ -0.67
TIMP1-204ENST00000445623 MAP1AP78559 2803 aaPredicted RBP10.87□□□□□ -0.67
TIMP1-204ENST00000445623 TRBV6-6A0A0A6YYG2 114 aa10.86□□□□□ -0.67
TIMP1-204ENST00000445623 ZNF729A6NN14 1252 aaPredicted RBP10.86□□□□□ -0.67
TIMP1-204ENST00000445623 M0R1W7 72 aa10.86□□□□□ -0.67
TIMP1-204ENST00000445623 NAPSAO96009 420 aa10.86□□□□□ -0.67
TIMP1-204ENST00000445623 RBP4P02753 201 aa10.86□□□□□ -0.67
TIMP1-204ENST00000445623 MELTFP08582 738 aa10.86□□□□□ -0.67
TIMP1-204ENST00000445623 ZNF728P0DKX0 622 aa10.86□□□□□ -0.67
TIMP1-204ENST00000445623 PAX2Q02962 417 aa10.86□□□□□ -0.67
TIMP1-204ENST00000445623 ZNF273Q14593 569 aa10.86□□□□□ -0.67
TIMP1-204ENST00000445623 METTL11BQ5VVY1 283 aa10.86□□□□□ -0.67
TIMP1-204ENST00000445623 ZNF554Q86TJ5 538 aa10.86□□□□□ -0.67
TIMP1-204ENST00000445623 OR4K15Q8NH41 348 aa10.86□□□□□ -0.67
TIMP1-204ENST00000445623 SETD6Q8TBK2 473 aa10.86□□□□□ -0.67
TIMP1-204ENST00000445623 MRPL30Q8TCC3 161 aaKnown RBP10.86□□□□□ -0.67
TIMP1-204ENST00000445623 DACT3Q96B18 629 aaPredicted RBP10.86□□□□□ -0.67
TIMP1-204ENST00000445623 OPN4Q9UHM6 478 aa10.86□□□□□ -0.67
TIMP1-204ENST00000445623 MED13LQ71F56 2210 aa10.86□□□□□ -0.67
TIMP1-204ENST00000445623 TEX15Q9BXT5 2789 aa10.85□□□□□ -0.67
TIMP1-204ENST00000445623 SPINT2O43291 252 aa10.85□□□□□ -0.67
TIMP1-204ENST00000445623 ORC5O43913 435 aa10.85□□□□□ -0.67
TIMP1-204ENST00000445623 DTYMKP23919 212 aa10.85□□□□□ -0.67
TIMP1-204ENST00000445623 TNFSF8P32971 234 aa10.85□□□□□ -0.67
TIMP1-204ENST00000445623 CBX5P45973 191 aa10.85□□□□□ -0.67
TIMP1-204ENST00000445623 SPANXN2Q5MJ10 180 aa10.85□□□□□ -0.67
TIMP1-204ENST00000445623 OLFML2AQ68BL7 652 aa10.85□□□□□ -0.67
TIMP1-204ENST00000445623 FAHD2BQ6P2I3 314 aaPredicted RBP10.85□□□□□ -0.67
TIMP1-204ENST00000445623 RTN4RL2Q86UN3 420 aa10.85□□□□□ -0.67
TIMP1-204ENST00000445623 TEX29Q8N6K0 151 aa10.85□□□□□ -0.67
TIMP1-204ENST00000445623 OR6Q1Q8NGQ2 317 aa10.85□□□□□ -0.67
TIMP1-204ENST00000445623 OR13A1Q8NGR1 328 aa10.85□□□□□ -0.67
TIMP1-204ENST00000445623 MRGPRDQ8TDS7 321 aa10.85□□□□□ -0.67
TIMP1-204ENST00000445623 CCDC107Q8WV48 283 aa10.85□□□□□ -0.67
TIMP1-204ENST00000445623 FAHD2AQ96GK7 314 aa10.85□□□□□ -0.67
TIMP1-204ENST00000445623 MBNL3Q9NUK0 354 aaKnown RBP10.85□□□□□ -0.67
TIMP1-204ENST00000445623 CALYQ9NYX4 217 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms