RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 C3AR1Q16581 482 aa10.26□□□□□ -0.77
MSH6-204ENST00000445503 TDHQ8IZJ6 230 aa10.26□□□□□ -0.77
MSH6-204ENST00000445503 OR1K1Q8NGR3 316 aa10.26□□□□□ -0.77
MSH6-204ENST00000445503 MOB3AQ96BX8 217 aa10.26□□□□□ -0.77
MSH6-204ENST00000445503 PRO1933Q9H354 126 aa10.26□□□□□ -0.77
MSH6-204ENST00000445503 GPR35Q9HC97 309 aa10.26□□□□□ -0.77
MSH6-204ENST00000445503 PSENENQ9NZ42 101 aa10.26□□□□□ -0.77
MSH6-204ENST00000445503 TUBD1Q9UJT1 453 aa10.26□□□□□ -0.77
MSH6-204ENST00000445503 TOX3O15405 576 aaPredicted RBP10.26□□□□□ -0.77
MSH6-204ENST00000445503 KCNMB1Q16558 191 aa10.26□□□□□ -0.77
MSH6-204ENST00000445503 FGFBP3Q8TAT2 258 aa10.26□□□□□ -0.77
MSH6-204ENST00000445503 CABLES2Q9BTV7 478 aa10.26□□□□□ -0.77
MSH6-204ENST00000445503 RSG1Q9BU20 258 aa10.26□□□□□ -0.77
MSH6-204ENST00000445503 B2MP61769 119 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 ZXDAP98168 799 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.25□□□□□ -0.77
MSH6-204ENST00000445503 LHX4Q969G2 390 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 C10orf35Q96D05 121 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 GSN-AS1Q9NRJ2 163 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 GFOD1Q9NXC2 390 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 PTPRZ1P23471 2315 aaPredicted RBP10.25□□□□□ -0.77
MSH6-204ENST00000445503 BMP5P22003 454 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 CA6P23280 308 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 PMP22Q01453 160 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 SLC25A53Q5H9E4 307 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 ACER2Q5QJU3 275 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 C10orf128Q5T292 105 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 TMEM54Q969K7 222 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 PLPPR2Q96GM1 343 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 IGLV3-12A0A075B6K2 115 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 SHISA7A6NL88 538 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 NXPH2O95156 264 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 VDAC1P21796 283 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 IL2RGP31785 369 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 DCAF12Q5T6F0 453 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 TMEM211Q6ICI0 200 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 ETFRF1Q6IPR1 90 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 ZNF818PQ6ZRF7 136 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 FAM185AQ8N0U4 392 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 APH1AQ96BI3 265 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 SSX3Q99909 188 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 ANGPTL4Q9BY76 406 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 TMEM222Q9H0R3 208 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 WNT5BQ9H1J7 359 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 KCNIP1Q9NZI2 227 aa10.25□□□□□ -0.77
MSH6-204ENST00000445503 IGHV1-45A0A0A0MS14 117 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 LAMTOR5O43504 91 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 CDS2O95674 445 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 SRD5A2P31213 254 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 CD200P41217 278 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 HBG1P69891 147 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 HBG2P69892 147 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 C1orf87Q8N0U7 546 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 BOD1Q96IK1 185 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 FAM234AQ9H0X4 552 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 HSF4Q9ULV5 492 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 TGIF2-C20orf24A0A0A6YYL0 155 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 LINC01387J3KSC0 135 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 RRP8O43159 456 aaKnown RBP10.24□□□□□ -0.77
MSH6-204ENST00000445503 CLN5O75503 358 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 RAC2P15153 192 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 MYPOPQ86VE0 399 aaPredicted RBP10.24□□□□□ -0.77
MSH6-204ENST00000445503 DTX1Q86Y01 620 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 TUSC5Q8IXB3 177 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 OR2Y1Q8NGV0 311 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 KCNE4Q8WWG9 221 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 NABP1Q96AH0 204 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 CLDN23Q96B33 292 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 PLA2G2EQ9NZK7 142 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 UBE2L5PA0A1B0GUS4 154 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 SYNGR1O43759 233 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 KRASP01116 189 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 PSG2P11465 335 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 HLA-CQ95604 372 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 GINS3Q9BRX5 216 aa10.24□□□□□ -0.77
MSH6-204ENST00000445503 TRGC2P03986 189 aa10.23□□□□□ -0.77
MSH6-204ENST00000445503 MMP9P14780 707 aa10.23□□□□□ -0.77
MSH6-204ENST00000445503 PCP4P48539 62 aa10.23□□□□□ -0.77
MSH6-204ENST00000445503 HGFACQ04756 655 aa10.23□□□□□ -0.77
MSH6-204ENST00000445503 BAXQ07812 192 aa10.23□□□□□ -0.77
MSH6-204ENST00000445503 IL11RAQ14626 422 aa10.23□□□□□ -0.77
MSH6-204ENST00000445503 IGFBP7Q16270 282 aa10.23□□□□□ -0.77
MSH6-204ENST00000445503 SPINK9Q5DT21 86 aa10.23□□□□□ -0.77
MSH6-204ENST00000445503 ZNF880Q6PDB4 577 aa10.23□□□□□ -0.77
MSH6-204ENST00000445503 FADS6Q8N9I5 356 aa10.23□□□□□ -0.77
MSH6-204ENST00000445503 FRZBQ92765 325 aa10.23□□□□□ -0.77
MSH6-204ENST00000445503 LURAP1Q96LR2 239 aa10.23□□□□□ -0.77
MSH6-204ENST00000445503 RPL36A-HNRNPH2H7BZ11 118 aa10.23□□□□□ -0.77
MSH6-204ENST00000445503 SYNGR3O43761 229 aa10.23□□□□□ -0.77
MSH6-204ENST00000445503 HEXAP06865 529 aa10.23□□□□□ -0.77
MSH6-204ENST00000445503 CTXN2P0C2S0 81 aa10.23□□□□□ -0.77
MSH6-204ENST00000445503 SLC23A3Q6PIS1 610 aa10.23□□□□□ -0.77
MSH6-204ENST00000445503 ZIC4Q8N9L1 334 aa10.23□□□□□ -0.77
MSH6-204ENST00000445503 GALNT14Q96FL9 552 aa10.23□□□□□ -0.77
MSH6-204ENST00000445503 FAM210BQ96KR6 192 aa10.23□□□□□ -0.77
MSH6-204ENST00000445503 SMIM7Q9BQ49 75 aa10.23□□□□□ -0.77
MSH6-204ENST00000445503 ZNF665Q9H7R5 613 aa10.23□□□□□ -0.77
MSH6-204ENST00000445503 CDH20Q9HBT6 801 aa10.23□□□□□ -0.77
MSH6-204ENST00000445503 SZT2Q5T011 3432 aa10.23□□□□□ -0.77
MSH6-204ENST00000445503 SPTBN2O15020 2390 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms