RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 TCF23Q7RTU1 214 aa12.5□□□□□ -0.41
CCNE1-203ENST00000444983 WFDC11Q8NEX6 87 aa12.5□□□□□ -0.41
CCNE1-203ENST00000444983 DACT3Q96B18 629 aaPredicted RBP12.5□□□□□ -0.41
CCNE1-203ENST00000444983 C1orf159Q96HA4 380 aa12.5□□□□□ -0.41
CCNE1-203ENST00000444983 Q96MF0 132 aa12.5□□□□□ -0.41
CCNE1-203ENST00000444983 DCTN5Q9BTE1 182 aa12.5□□□□□ -0.41
CCNE1-203ENST00000444983 SSBP3Q9BWW4 388 aaPredicted RBP12.5□□□□□ -0.41
CCNE1-203ENST00000444983 KIF25Q9UIL4 384 aa12.5□□□□□ -0.41
CCNE1-203ENST00000444983 ANAPC10Q9UM13 185 aa12.5□□□□□ -0.41
CCNE1-203ENST00000444983 POLR3KQ9Y2Y1 108 aaPredicted RBP12.5□□□□□ -0.41
CCNE1-203ENST00000444983 RBMX2Q9Y388 322 aaKnown RBP12.5□□□□□ -0.41
CCNE1-203ENST00000444983 KIAA2026Q5HYC2 2103 aa12.5□□□□□ -0.41
CCNE1-203ENST00000444983 OTOGQ6ZRI0 2925 aa12.5□□□□□ -0.41
CCNE1-203ENST00000444983 TMEM30CPA0ZSE6 113 aa12.49□□□□□ -0.41
CCNE1-203ENST00000444983 ODAMA1E959 279 aa12.49□□□□□ -0.41
CCNE1-203ENST00000444983 LPLP06858 475 aa12.49□□□□□ -0.41
CCNE1-203ENST00000444983 CD3GP09693 182 aa12.49□□□□□ -0.41
CCNE1-203ENST00000444983 CGB3P0DN86 165 aa12.49□□□□□ -0.41
CCNE1-203ENST00000444983 CGB7P0DN87 165 aa12.49□□□□□ -0.41
CCNE1-203ENST00000444983 NDUFB7P17568 137 aa12.49□□□□□ -0.41
CCNE1-203ENST00000444983 DTYMKP23919 212 aa12.49□□□□□ -0.41
CCNE1-203ENST00000444983 ZFP36P26651 326 aaKnown RBP12.49□□□□□ -0.41
CCNE1-203ENST00000444983 GNG2P59768 71 aa12.49□□□□□ -0.41
CCNE1-203ENST00000444983 DGCR2P98153 550 aa12.49□□□□□ -0.41
CCNE1-203ENST00000444983 PAX2Q02962 417 aa12.49□□□□□ -0.41
CCNE1-203ENST00000444983 SRSF7Q16629 238 aaKnown RBP eCLIP12.49□□□□□ -0.41
CCNE1-203ENST00000444983 Q6ZS49 121 aa12.49□□□□□ -0.41
CCNE1-203ENST00000444983 LY6G5BQ8NDX9 201 aa12.49□□□□□ -0.41
CCNE1-203ENST00000444983 OR52I2Q8NH67 350 aa12.49□□□□□ -0.41
CCNE1-203ENST00000444983 C8orf46Q8TAG6 207 aa12.49□□□□□ -0.41
CCNE1-203ENST00000444983 CORO2AQ92828 525 aa12.49□□□□□ -0.41
CCNE1-203ENST00000444983 RAB39BQ96DA2 213 aa12.49□□□□□ -0.41
CCNE1-203ENST00000444983 REG4Q9BYZ8 158 aa12.49□□□□□ -0.41
CCNE1-203ENST00000444983 CREBBPQ92793 2442 aa12.49□□□□□ -0.41
CCNE1-203ENST00000444983 CR1P17927 2039 aa12.49□□□□□ -0.41
CCNE1-203ENST00000444983 ARHGAP32A7KAX9 2087 aa12.49□□□□□ -0.41
CCNE1-203ENST00000444983 ZANQ9Y493 2812 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 FAM157AC9JC47 383 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 FCGR3AP08637 254 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 RCC1P18754 421 aaPredicted RBP12.48□□□□□ -0.41
CCNE1-203ENST00000444983 PPP5CP53041 499 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 GNB2P62879 340 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 MEF2CQ06413 473 aaPredicted RBP12.48□□□□□ -0.41
CCNE1-203ENST00000444983 EDDM3AQ14507 147 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 BTN2A1Q7KYR7 527 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 GDPD1Q8N9F7 314 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 OR4K15Q8NH41 348 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 TSC22D3Q99576 134 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 Q9N2K0 584 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 C19orf12Q9NSK7 152 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 KLK11Q9UBX7 282 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 MTFP1Q9UDX5 166 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 ZNF230Q9UIE0 474 aaPredicted RBP12.48□□□□□ -0.41
CCNE1-203ENST00000444983 AKAP9Q99996 3911 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 MEIKINA0A087WXM9 373 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 TRBV23-1A0A0A0MS06 115 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 FUOMA2VDF0 154 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 C22orf46C9J442 243 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 PHF1O43189 567 aaPredicted RBP12.48□□□□□ -0.41
CCNE1-203ENST00000444983 ECDO95905 644 aaPredicted RBP12.48□□□□□ -0.41
CCNE1-203ENST00000444983 NAT1P18440 290 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 CD40LGP29965 261 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 EDDM3BP56851 147 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 RPL31P62899 125 aaKnown RBP12.48□□□□□ -0.41
CCNE1-203ENST00000444983 ESCO2Q56NI9 601 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 TRAPPC6BQ86SZ2 158 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 Q8N402 240 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 GVQW1Q8N7I0 195 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 OR13A1Q8NGR1 328 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 FCAMRQ8WWV6 532 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 TRIM63Q969Q1 353 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 WDR12Q9GZL7 423 aaKnown RBP12.48□□□□□ -0.41
CCNE1-203ENST00000444983 ING3Q9NXR8 418 aa12.48□□□□□ -0.41
CCNE1-203ENST00000444983 RPUSD1Q9UJJ7 312 aaKnown RBP12.48□□□□□ -0.41
CCNE1-203ENST00000444983 FLNAP21333 2647 aaKnown RBP12.47□□□□□ -0.41
CCNE1-203ENST00000444983 IGKV1D-8A0A087WSZ0 117 aa12.47□□□□□ -0.41
CCNE1-203ENST00000444983 RNF223E7ERA6 249 aa12.47□□□□□ -0.41
CCNE1-203ENST00000444983 LANCL1O43813 399 aa12.47□□□□□ -0.41
CCNE1-203ENST00000444983 ORC5O43913 435 aa12.47□□□□□ -0.41
CCNE1-203ENST00000444983 CBX5P45973 191 aa12.47□□□□□ -0.41
CCNE1-203ENST00000444983 SSBP1Q04837 148 aaKnown RBP12.47□□□□□ -0.41
CCNE1-203ENST00000444983 ZNF846Q147U1 533 aa12.47□□□□□ -0.41
CCNE1-203ENST00000444983 BAK1Q16611 211 aa12.47□□□□□ -0.41
CCNE1-203ENST00000444983 PYDC2Q56P42 97 aa12.47□□□□□ -0.41
CCNE1-203ENST00000444983 TMEM200BQ69YZ2 307 aa12.47□□□□□ -0.41
CCNE1-203ENST00000444983 ZNF554Q86TJ5 538 aa12.47□□□□□ -0.41
CCNE1-203ENST00000444983 HOGA1Q86XE5 327 aa12.47□□□□□ -0.41
CCNE1-203ENST00000444983 ZNF565Q8N9K5 539 aa12.47□□□□□ -0.41
CCNE1-203ENST00000444983 DMRTB1Q96MA1 342 aa12.47□□□□□ -0.41
CCNE1-203ENST00000444983 THAP7Q9BT49 309 aaPredicted RBP12.47□□□□□ -0.41
CCNE1-203ENST00000444983 LINC00574Q9H8X3 128 aa12.47□□□□□ -0.41
CCNE1-203ENST00000444983 OR6C3Q9NZP0 311 aa12.47□□□□□ -0.41
CCNE1-203ENST00000444983 LINC00312Q9Y6C7 94 aa12.47□□□□□ -0.41
CCNE1-203ENST00000444983 TEX15Q9BXT5 2789 aa12.47□□□□□ -0.41
CCNE1-203ENST00000444983 TRAV39A0A0B4J263 110 aa12.46□□□□□ -0.41
CCNE1-203ENST00000444983 hADV38S2A0JD32 116 aa12.46□□□□□ -0.41
CCNE1-203ENST00000444983 MEIS3P1A6NDR6 274 aa12.46□□□□□ -0.41
CCNE1-203ENST00000444983 MRPS15P82914 257 aaKnown RBP12.46□□□□□ -0.41
CCNE1-203ENST00000444983 CD276Q5ZPR3 534 aa12.46□□□□□ -0.41
CCNE1-203ENST00000444983 LYSMD2Q8IV50 215 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms