RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 CISHQ9NSE2 258 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 IDI2-AS1Q9NZ38 188 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 DPM3Q9P2X0 92 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 PCYOX1Q9UHG3 505 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 ZNF223Q9UK11 482 aaPredicted RBP3.44□□□□□ -1.86
VPS50-206ENST00000443443 UGT2A1Q9Y4X1 527 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 HES2Q9Y543 173 aa3.44□□□□□ -1.86
VPS50-206ENST00000443443 ADAMTSL3P82987 1691 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 A0A1B0GV50 99 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 IGSF23A1L1A6 192 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 FAM183AA6NL82 134 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 BTNL10A8MVZ5 291 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 K7EQS6 105 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 ZNF354AO60765 605 aaPredicted RBP3.43□□□□□ -1.86
VPS50-206ENST00000443443 TBL1XO60907 577 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 NPIPB7O75200 414 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 GPR75O95800 540 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 REG1AP05451 166 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 ESDP10768 282 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 ZNF708P17019 499 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 NELFEP18615 380 aaKnown RBP3.43□□□□□ -1.86
VPS50-206ENST00000443443 DDTP30046 118 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 BTCP35070 178 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 P2RX1P51575 399 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 RHOBP62745 196 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 PRR3P79522 188 aaKnown RBP3.43□□□□□ -1.86
VPS50-206ENST00000443443 ZNF763Q0D2J5 394 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 FZD2Q14332 565 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 SIX1Q15475 284 aaPredicted RBP3.43□□□□□ -1.86
VPS50-206ENST00000443443 TMEM128Q5BJH2 165 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 SAMD13Q5VXD3 122 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 ZFP1Q6P2D0 407 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 TBPL2Q6SJ96 375 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 CLEC19AQ6UXS0 136 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 SCGB1D4Q6XE38 83 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 NEGR1Q7Z3B1 354 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 TGIF2LYQ8IUE0 185 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 C1orf158Q8N1D5 194 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 SLC35F6Q8N357 371 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 CD177Q8N6Q3 437 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 Q8N7P7 452 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 GPR26Q8NDV2 337 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 OR51A2Q8NGJ7 313 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 OR9I1Q8NGQ6 314 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 TMEM159Q96B96 161 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 SMIM8Q96KF7 97 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 PLEKHF1Q96S99 279 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 RTBDNQ9BSG5 229 aaPredicted RBP3.43□□□□□ -1.86
VPS50-206ENST00000443443 EBPLQ9BY08 206 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 CCDC90BQ9GZT6 254 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 PRO0461Q9UI25 63 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 NRCAMQ92823 1304 aa3.43□□□□□ -1.86
VPS50-206ENST00000443443 NOTCH2Q04721 2471 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 IGHV7-81A0A0B4J1V7 117 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 GMNCA6NCL1 334 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 EEF1E1-BLOC1S5C9J1V9 151 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 F8W036 122 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 EEF1E1O43324 174 aaKnown RBP3.42□□□□□ -1.86
VPS50-206ENST00000443443 ORC5O43913 435 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 PDCD6O75340 191 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 SERPINB7O75635 380 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 SULT1C4O75897 302 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 TTRP02766 147 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 CYBAP13498 195 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 CXCL2P19875 107 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 RAB3AP20336 220 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 OGNP20774 298 aaKnown RBP3.42□□□□□ -1.86
VPS50-206ENST00000443443 MARCKSL1P49006 195 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 SLC18A1P54219 525 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 TPI1P60174 286 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 HSPE1P61604 102 aaKnown RBP3.42□□□□□ -1.86
VPS50-206ENST00000443443 PMAIP1Q13794 54 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 IHHQ14623 411 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 EBPQ15125 230 aaKnown RBP3.42□□□□□ -1.86
VPS50-206ENST00000443443 IRF4Q15306 451 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 SURF2Q15527 256 aaPredicted RBP3.42□□□□□ -1.86
VPS50-206ENST00000443443 TGIF1Q15583 401 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 GSG1Q2KHT4 349 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 DCUN1D2Q6PH85 259 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 TMPPEQ6ZT21 453 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 SLC16A13Q7RTY0 426 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 ZNF567Q8N184 647 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 C11orf72Q8NBR9 251 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 CSNK1G2-AS1Q8NCQ2 148 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 OR2M7Q8NG81 312 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 JOSD2Q8TAC2 188 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 VN1R17PQ8TDU5 208 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 SEH1LQ96EE3 360 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 SLC35G5Q96KT7 338 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 POLR2J2Q9GZM3 115 aaKnown RBP3.42□□□□□ -1.86
VPS50-206ENST00000443443 POLR2J3Q9H1A7 115 aaKnown RBP3.42□□□□□ -1.86
VPS50-206ENST00000443443 ABCG5Q9H222 651 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 SPNS1Q9H2V7 528 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 ZSCAN16Q9H4T2 348 aaPredicted RBP3.42□□□□□ -1.86
VPS50-206ENST00000443443 HEBP1Q9NRV9 189 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 PLSCR3Q9NRY6 295 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 FAM49BQ9NUQ9 324 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 ZNF226Q9NYT6 803 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 CLCF1Q9UBD9 225 aa3.42□□□□□ -1.86
VPS50-206ENST00000443443 SS18L2Q9UHA2 77 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms