RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 M0QZ24 198 aa16.97■□□□□ 0.31
CDKN3-204ENST00000442975 IL1AP01583 271 aa16.97■□□□□ 0.31
CDKN3-204ENST00000442975 SSTR5P35346 364 aa16.97■□□□□ 0.31
CDKN3-204ENST00000442975 SPHARQ15513 63 aa16.97■□□□□ 0.31
CDKN3-204ENST00000442975 MPV17LQ2QL34 196 aa16.97■□□□□ 0.31
CDKN3-204ENST00000442975 RNLSQ5VYX0 342 aa16.97■□□□□ 0.31
CDKN3-204ENST00000442975 CCBE1Q6UXH8 406 aaPredicted RBP16.97■□□□□ 0.31
CDKN3-204ENST00000442975 NKAIN3Q8N8D7 197 aa16.97■□□□□ 0.31
CDKN3-204ENST00000442975 KIRREL1Q96J84 757 aa16.97■□□□□ 0.31
CDKN3-204ENST00000442975 ANKRD60Q9BZ19 345 aa16.97■□□□□ 0.31
CDKN3-204ENST00000442975 DPM3Q9P2X0 92 aa16.97■□□□□ 0.31
CDKN3-204ENST00000442975 FBLN5Q9UBX5 448 aa16.97■□□□□ 0.31
CDKN3-204ENST00000442975 TPRKBQ9Y3C4 175 aa16.97■□□□□ 0.31
CDKN3-204ENST00000442975 TMEM30CPA0ZSE6 113 aa16.96■□□□□ 0.31
CDKN3-204ENST00000442975 TIMM23O14925 209 aa16.96■□□□□ 0.31
CDKN3-204ENST00000442975 IGHV3-7P01780 117 aa16.96■□□□□ 0.31
CDKN3-204ENST00000442975 MYF6P23409 242 aa16.96■□□□□ 0.31
CDKN3-204ENST00000442975 CD34P28906 385 aa16.96■□□□□ 0.31
CDKN3-204ENST00000442975 DYNLT3P51808 116 aa16.96■□□□□ 0.31
CDKN3-204ENST00000442975 SLC35A2P78381 396 aa16.96■□□□□ 0.31
CDKN3-204ENST00000442975 GPR176Q14439 515 aa16.96■□□□□ 0.31
CDKN3-204ENST00000442975 HLA-DRB5Q30154 266 aa16.96■□□□□ 0.31
CDKN3-204ENST00000442975 UTF1Q5T230 341 aa16.96■□□□□ 0.31
CDKN3-204ENST00000442975 RFESDQ8TAC1 157 aa16.96■□□□□ 0.31
CDKN3-204ENST00000442975 LEAP2Q969E1 77 aa16.96■□□□□ 0.31
CDKN3-204ENST00000442975 CCDC90BQ9GZT6 254 aa16.96■□□□□ 0.31
CDKN3-204ENST00000442975 IFT22Q9H7X7 185 aa16.96■□□□□ 0.31
CDKN3-204ENST00000442975 LSM2Q9Y333 95 aaKnown RBP16.96■□□□□ 0.31
CDKN3-204ENST00000442975 LEUTXA8MZ59 168 aa16.95■□□□□ 0.3
CDKN3-204ENST00000442975 CRTAPO75718 401 aaPredicted RBP16.95■□□□□ 0.3
CDKN3-204ENST00000442975 IGLV1-47P01700 117 aa16.95■□□□□ 0.3
CDKN3-204ENST00000442975 HSMCR30P0CW71 290 aa16.95■□□□□ 0.3
CDKN3-204ENST00000442975 KIR2DS4P43632 304 aa16.95■□□□□ 0.3
CDKN3-204ENST00000442975 ARHGDIBP52566 201 aa16.95■□□□□ 0.3
CDKN3-204ENST00000442975 EFNB2P52799 333 aa16.95■□□□□ 0.3
CDKN3-204ENST00000442975 ACSM3Q53FZ2 586 aa16.95■□□□□ 0.3
CDKN3-204ENST00000442975 FAM27D1Q5T7N8 215 aa16.95■□□□□ 0.3
CDKN3-204ENST00000442975 KLHDC1Q8N7A1 406 aa16.95■□□□□ 0.3
CDKN3-204ENST00000442975 UFD1Q92890 307 aa16.95■□□□□ 0.3
CDKN3-204ENST00000442975 BANF2Q9H503 90 aa16.95■□□□□ 0.3
CDKN3-204ENST00000442975 IDI2-AS1Q9NZ38 188 aa16.95■□□□□ 0.3
CDKN3-204ENST00000442975 RGS10O43665 173 aa16.94■□□□□ 0.3
CDKN3-204ENST00000442975 VSIG10L2P0DP72 767 aa16.94■□□□□ 0.3
CDKN3-204ENST00000442975 CD24P25063 80 aa16.94■□□□□ 0.3
CDKN3-204ENST00000442975 CEACAM3P40198 252 aa16.94■□□□□ 0.3
CDKN3-204ENST00000442975 GNG10P50151 68 aa16.94■□□□□ 0.3
CDKN3-204ENST00000442975 PRRX1P54821 245 aa16.94■□□□□ 0.3
CDKN3-204ENST00000442975 PAX5Q02548 391 aa16.94■□□□□ 0.3
CDKN3-204ENST00000442975 HABP2Q14520 560 aaPredicted RBP16.94■□□□□ 0.3
CDKN3-204ENST00000442975 ARSJQ5FYB0 599 aaPredicted RBP16.94■□□□□ 0.3
CDKN3-204ENST00000442975 RBM48Q5RL73 367 aaKnown RBP16.94■□□□□ 0.3
CDKN3-204ENST00000442975 LIPKQ5VXJ0 399 aa16.94■□□□□ 0.3
CDKN3-204ENST00000442975 MS4A15Q8N5U1 240 aa16.94■□□□□ 0.3
CDKN3-204ENST00000442975 FAM46BQ96A09 425 aa16.94■□□□□ 0.3
CDKN3-204ENST00000442975 CREB3L1Q96BA8 519 aa16.94■□□□□ 0.3
CDKN3-204ENST00000442975 CNBD2Q96M20 576 aa16.94■□□□□ 0.3
CDKN3-204ENST00000442975 SELENOIQ9C0D9 397 aa16.94■□□□□ 0.3
CDKN3-204ENST00000442975 MMP28Q9H239 520 aa16.94■□□□□ 0.3
CDKN3-204ENST00000442975 NCOR1P1Q9H4R4 102 aa16.94■□□□□ 0.3
CDKN3-204ENST00000442975 ZNF702PQ9H963 129 aa16.94■□□□□ 0.3
CDKN3-204ENST00000442975 SPACA1Q9HBV2 294 aa16.94■□□□□ 0.3
CDKN3-204ENST00000442975 PKD1L1Q8TDX9 2849 aa16.94■□□□□ 0.3
CDKN3-204ENST00000442975 A0A087X0M5 115 aa16.93■□□□□ 0.3
CDKN3-204ENST00000442975 A0A1B0GX30 115 aa16.93■□□□□ 0.3
CDKN3-204ENST00000442975 MEGF11A6BM72 1044 aa16.93■□□□□ 0.3
CDKN3-204ENST00000442975 BUB1B-PAK6H3BSN5 160 aa16.93■□□□□ 0.3
CDKN3-204ENST00000442975 MGMTP16455 207 aa16.93■□□□□ 0.3
CDKN3-204ENST00000442975 BRS3P32247 399 aa16.93■□□□□ 0.3
CDKN3-204ENST00000442975 HSPA13P48723 471 aa16.93■□□□□ 0.3
CDKN3-204ENST00000442975 GPR50Q13585 617 aa16.93■□□□□ 0.3
CDKN3-204ENST00000442975 IRF3Q14653 427 aa16.93■□□□□ 0.3
CDKN3-204ENST00000442975 TPTE2P1Q5T6R2 138 aa16.93■□□□□ 0.3
CDKN3-204ENST00000442975 C11orf88Q6PI97 169 aa16.93■□□□□ 0.3
CDKN3-204ENST00000442975 Q6ZTK2 550 aa16.93■□□□□ 0.3
CDKN3-204ENST00000442975 CDH26Q8IXH8 852 aa16.93■□□□□ 0.3
CDKN3-204ENST00000442975 C11orf44Q8N8P7 122 aa16.93■□□□□ 0.3
CDKN3-204ENST00000442975 OR9G1Q8NH87 305 aa16.93■□□□□ 0.3
CDKN3-204ENST00000442975 UBALD1Q8TB05 177 aa16.93■□□□□ 0.3
CDKN3-204ENST00000442975 CCDC107Q8WV48 283 aa16.93■□□□□ 0.3
CDKN3-204ENST00000442975 CAPSLQ8WWF8 208 aa16.93■□□□□ 0.3
CDKN3-204ENST00000442975 CGB3P0DN86 165 aa16.92■□□□□ 0.3
CDKN3-204ENST00000442975 CGB7P0DN87 165 aa16.92■□□□□ 0.3
CDKN3-204ENST00000442975 RAB12Q6IQ22 244 aa16.92■□□□□ 0.3
CDKN3-204ENST00000442975 CEACAM19Q7Z692 300 aa16.92■□□□□ 0.3
CDKN3-204ENST00000442975 TMEM104Q8NE00 496 aa16.92■□□□□ 0.3
CDKN3-204ENST00000442975 TOMM40LQ969M1 308 aa16.92■□□□□ 0.3
CDKN3-204ENST00000442975 TMEM203Q969S6 136 aa16.92■□□□□ 0.3
CDKN3-204ENST00000442975 RPEQ96AT9 228 aa16.92■□□□□ 0.3
CDKN3-204ENST00000442975 MRPS24Q96EL2 167 aaKnown RBP16.92■□□□□ 0.3
CDKN3-204ENST00000442975 UQCC2Q9BRT2 126 aa16.92■□□□□ 0.3
CDKN3-204ENST00000442975 AMMECR1Q9Y4X0 333 aaPredicted RBP16.92■□□□□ 0.3
CDKN3-204ENST00000442975 DSCAML1Q8TD84 2053 aa16.92■□□□□ 0.3
CDKN3-204ENST00000442975 H3BUI4 141 aa16.91■□□□□ 0.3
CDKN3-204ENST00000442975 AIPO00170 330 aa16.91■□□□□ 0.3
CDKN3-204ENST00000442975 HERPUD1Q15011 391 aa16.91■□□□□ 0.3
CDKN3-204ENST00000442975 HSD17B12Q53GQ0 312 aa16.91■□□□□ 0.3
CDKN3-204ENST00000442975 HIST2H2BDQ6DRA6 164 aa16.91■□□□□ 0.3
CDKN3-204ENST00000442975 CCDC144NLQ6NUI1 221 aa16.91■□□□□ 0.3
CDKN3-204ENST00000442975 DTX3Q8N9I9 347 aa16.91■□□□□ 0.3
CDKN3-204ENST00000442975 DUSP21Q9H596 190 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms