RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 NTN3O00634 580 aaPredicted RBP11.27□□□□□ -0.61
SLC48A1-201ENST00000442218 EIF1BO60739 113 aaKnown RBP11.27□□□□□ -0.61
SLC48A1-201ENST00000442218 CXCL1P09341 107 aa11.27□□□□□ -0.61
SLC48A1-201ENST00000442218 CTSSP25774 331 aa11.27□□□□□ -0.61
SLC48A1-201ENST00000442218 ALDH3B1P43353 468 aa11.27□□□□□ -0.61
SLC48A1-201ENST00000442218 RBM11P57052 281 aaKnown RBP11.27□□□□□ -0.61
SLC48A1-201ENST00000442218 MRPS34P82930 218 aaKnown RBP11.27□□□□□ -0.61
SLC48A1-201ENST00000442218 HERPUD1Q15011 391 aa11.27□□□□□ -0.61
SLC48A1-201ENST00000442218 MPV17LQ2QL34 196 aa11.27□□□□□ -0.61
SLC48A1-201ENST00000442218 OR2B11Q5JQS5 317 aa11.27□□□□□ -0.61
SLC48A1-201ENST00000442218 RAB39BQ96DA2 213 aa11.27□□□□□ -0.61
SLC48A1-201ENST00000442218 IMMP1LQ96LU5 166 aa11.27□□□□□ -0.61
SLC48A1-201ENST00000442218 VSIRQ9H7M9 311 aa11.27□□□□□ -0.61
SLC48A1-201ENST00000442218 H3BQ15 152 aa11.27□□□□□ -0.61
SLC48A1-201ENST00000442218 HIST2H3AQ71DI3 136 aa11.27□□□□□ -0.61
SLC48A1-201ENST00000442218 TIPARPQ7Z3E1 657 aaKnown RBP11.27□□□□□ -0.61
SLC48A1-201ENST00000442218 THNSL2Q86YJ6 484 aa11.27□□□□□ -0.61
SLC48A1-201ENST00000442218 ZNF561Q8N587 486 aa11.27□□□□□ -0.61
SLC48A1-201ENST00000442218 TMEM252Q8N6L7 170 aa11.27□□□□□ -0.61
SLC48A1-201ENST00000442218 SPSB1Q96BD6 273 aa11.27□□□□□ -0.61
SLC48A1-201ENST00000442218 RBMXL1Q96E39 390 aaKnown RBP11.27□□□□□ -0.61
SLC48A1-201ENST00000442218 SYT3Q9BQG1 590 aa11.27□□□□□ -0.61
SLC48A1-201ENST00000442218 PRRG4Q9BZD6 226 aa11.27□□□□□ -0.61
SLC48A1-201ENST00000442218 GNG13Q9P2W3 67 aa11.27□□□□□ -0.61
SLC48A1-201ENST00000442218 ARPC4-TTLL3A0A0A6YYG9 625 aa11.26□□□□□ -0.61
SLC48A1-201ENST00000442218 P04436 131 aa11.26□□□□□ -0.61
SLC48A1-201ENST00000442218 SEC11BP0C7V7 166 aa11.26□□□□□ -0.61
SLC48A1-201ENST00000442218 BMP5P22003 454 aa11.26□□□□□ -0.61
SLC48A1-201ENST00000442218 UBE2KP61086 200 aa11.26□□□□□ -0.61
SLC48A1-201ENST00000442218 RAC1P63000 192 aa11.26□□□□□ -0.61
SLC48A1-201ENST00000442218 MOB3AQ96BX8 217 aa11.26□□□□□ -0.61
SLC48A1-201ENST00000442218 GINS3Q9BRX5 216 aa11.26□□□□□ -0.61
SLC48A1-201ENST00000442218 PLA2G3Q9NZ20 509 aa11.26□□□□□ -0.61
SLC48A1-201ENST00000442218 ZFHX2Q9C0A1 2572 aaPredicted RBP11.26□□□□□ -0.61
SLC48A1-201ENST00000442218 hCG_38984A0A1B0GV85 526 aa11.26□□□□□ -0.61
SLC48A1-201ENST00000442218 RRP8O43159 456 aaKnown RBP11.26□□□□□ -0.61
SLC48A1-201ENST00000442218 NDUFS6O75380 124 aaKnown RBP11.26□□□□□ -0.61
SLC48A1-201ENST00000442218 TFF1P04155 84 aa11.26□□□□□ -0.61
SLC48A1-201ENST00000442218 FUT3P21217 361 aa11.26□□□□□ -0.61
SLC48A1-201ENST00000442218 DPPA2Q7Z7J5 298 aa11.26□□□□□ -0.61
SLC48A1-201ENST00000442218 CPNE4Q96A23 557 aaPredicted RBP11.26□□□□□ -0.61
SLC48A1-201ENST00000442218 SGCZQ96LD1 299 aa11.26□□□□□ -0.61
SLC48A1-201ENST00000442218 SUCNR1Q9BXA5 334 aa11.26□□□□□ -0.61
SLC48A1-201ENST00000442218 ZNF552Q9H707 407 aaPredicted RBP11.26□□□□□ -0.61
SLC48A1-201ENST00000442218 LNP1A1A4G5 178 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 RBFOX3A6NFN3 312 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 IFNA4P05014 189 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 DEFA4P12838 97 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 MMP9P14780 707 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 SPNS3Q6ZMD2 512 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 LHFPL2Q6ZUX7 228 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 AGBL5Q8NDL9 886 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 EDARADDQ8WWZ3 215 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 ANGPTL4Q9BY76 406 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 PPP1R3CQ9UQK1 317 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 RBM7Q9Y580 266 aaKnown RBP11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 IGKV1-6A0A0C4DH72 117 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 ZNF732B4DXR9 585 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 C9J4A7 227 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 K7N7A8 449 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 AGAP20933 346 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 DUSP3P51452 185 aaPredicted RBP11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 ELLP55199 621 aaPredicted RBP11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 ERVFRD-1P60508 538 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 DLK1P80370 383 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 ARF1P84077 181 aaKnown RBP11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 ZFP36L1Q07352 338 aaKnown RBP11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 GGNQ86UU5 652 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 ODF3L1Q8IXM7 274 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 TMPRSS5Q9H3S3 457 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 C12orf49Q9H741 205 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 ZNF716A6NP11 495 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 CBR3O75828 277 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 RAB11AP62491 216 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 PRDX4Q13162 271 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 OR4D5Q8NGN0 318 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 OR1J1Q8NGS3 322 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 Q8WTZ3 238 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 GALNT14Q96FL9 552 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 GPR35Q9HC97 309 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 MTCH1Q9NZJ7 389 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 HSF4Q9ULV5 492 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 POMT1Q9Y6A1 747 aa11.25□□□□□ -0.61
SLC48A1-201ENST00000442218 PTPRZ1P23471 2315 aaPredicted RBP11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 TRDCB7Z8K6 153 aa11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 CYB5BO43169 146 aa11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 TK1P04183 234 aa11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 FGF5P12034 268 aa11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 RAC3P60763 192 aa11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 HIST1H3AP68431 136 aa11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 HIST2H3PS2Q5TEC6 136 aa11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 SPSB3Q6PJ21 355 aa11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 TUSC5Q8IXB3 177 aa11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 SELENOHQ8IZQ5 122 aaKnown RBP11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 NECAP1Q8NC96 275 aa11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 PBDC1Q9BVG4 233 aa11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 SLC22A20A6NK97 555 aa11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 VAMP5O95183 116 aa11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 METTL15P1P0C7V9 234 aa11.24□□□□□ -0.61
SLC48A1-201ENST00000442218 PSG2P11465 335 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms