RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 MPZP25189 248 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 UNC119Q13432 240 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 USF2Q15853 346 aaPredicted RBP6.91□□□□□ -1.3
CCDC39-201ENST00000442201 CEACAM21Q3KPI0 293 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 NCMAPQ5T1S8 102 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 KLF14Q8TD94 323 aaPredicted RBP6.91□□□□□ -1.3
CCDC39-201ENST00000442201 SMIM4Q8WVI0 70 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 C14orf79Q96F83 325 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 CACNG6Q9BXT2 260 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 CA10Q9NS85 328 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 OR2AT4A6NND4 320 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 SFTPBP07988 381 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 CHRNB4P30926 498 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 RSU1Q15404 277 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 C1QL2Q7Z5L3 287 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 BIVMQ86UB2 503 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 TMEM104Q8NE00 496 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 MRGPRDQ8TDS7 321 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 URM1Q9BTM9 101 aaKnown RBP6.91□□□□□ -1.3
CCDC39-201ENST00000442201 SUCNR1Q9BXA5 334 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 TMEM59Q9BXS4 323 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 SNHG12Q9BXW3 62 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 C20orf85Q9H1P6 137 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 OPN4Q9UHM6 478 aa6.91□□□□□ -1.3
CCDC39-201ENST00000442201 IGKV1-27A0A075B6S5 117 aa6.9□□□□□ -1.3
CCDC39-201ENST00000442201 FAM221AA4D161 298 aa6.9□□□□□ -1.3
CCDC39-201ENST00000442201 GABARAPH6UMI1 98 aa6.9□□□□□ -1.3
CCDC39-201ENST00000442201 GSTZ1O43708 216 aaPredicted RBP6.9□□□□□ -1.3
CCDC39-201ENST00000442201 PPBPP02775 128 aa6.9□□□□□ -1.3
CCDC39-201ENST00000442201 RAB5AP20339 215 aa6.9□□□□□ -1.3
CCDC39-201ENST00000442201 GCH1P30793 250 aa6.9□□□□□ -1.3
CCDC39-201ENST00000442201 ASCL1P50553 236 aa6.9□□□□□ -1.3
CCDC39-201ENST00000442201 DGCR2P98153 550 aa6.9□□□□□ -1.3
CCDC39-201ENST00000442201 PSG7Q13046 419 aa6.9□□□□□ -1.3
CCDC39-201ENST00000442201 ZNF718Q3SXZ3 478 aa6.9□□□□□ -1.3
CCDC39-201ENST00000442201 RNASE12Q5GAN4 147 aaKnown RBP6.9□□□□□ -1.3
CCDC39-201ENST00000442201 OR5A2Q8NGI9 324 aa6.9□□□□□ -1.3
CCDC39-201ENST00000442201 OR1S2Q8NGQ3 325 aa6.9□□□□□ -1.3
CCDC39-201ENST00000442201 HPSE2Q8WWQ2 592 aa6.9□□□□□ -1.3
CCDC39-201ENST00000442201 SMIM8Q96KF7 97 aa6.9□□□□□ -1.3
CCDC39-201ENST00000442201 CRIM1Q9NZV1 1036 aa6.9□□□□□ -1.3
CCDC39-201ENST00000442201 MRPL15Q9P015 296 aaKnown RBP6.9□□□□□ -1.3
CCDC39-201ENST00000442201 RCC2Q9P258 522 aaKnown RBP6.9□□□□□ -1.3
CCDC39-201ENST00000442201 BSNQ9UPA5 3926 aa6.9□□□□□ -1.3
CCDC39-201ENST00000442201 SNRPGP15A8MWD9 76 aa6.9□□□□□ -1.31
CCDC39-201ENST00000442201 ARPC5O15511 151 aa6.9□□□□□ -1.31
CCDC39-201ENST00000442201 CDC14BO60729 498 aa6.9□□□□□ -1.31
CCDC39-201ENST00000442201 LILRA1O75019 489 aa6.9□□□□□ -1.31
CCDC39-201ENST00000442201 CSTBP04080 98 aaKnown RBP6.9□□□□□ -1.31
CCDC39-201ENST00000442201 CHRM2P08172 466 aa6.9□□□□□ -1.31
CCDC39-201ENST00000442201 CA6P23280 308 aa6.9□□□□□ -1.31
CCDC39-201ENST00000442201 SORDQ00796 357 aa6.9□□□□□ -1.31
CCDC39-201ENST00000442201 HSD17B11Q8NBQ5 300 aa6.9□□□□□ -1.31
CCDC39-201ENST00000442201 ACBD4Q8NC06 268 aa6.9□□□□□ -1.31
CCDC39-201ENST00000442201 FCAMRQ8WWV6 532 aa6.9□□□□□ -1.31
CCDC39-201ENST00000442201 RRNAD1Q96FB5 475 aaKnown RBP6.9□□□□□ -1.31
CCDC39-201ENST00000442201 CLCC1Q96S66 551 aa6.9□□□□□ -1.31
CCDC39-201ENST00000442201 RSRP1Q9BUV0 290 aa6.9□□□□□ -1.31
CCDC39-201ENST00000442201 LPAR5Q9H1C0 372 aa6.9□□□□□ -1.31
CCDC39-201ENST00000442201 BANF2Q9H503 90 aa6.9□□□□□ -1.31
CCDC39-201ENST00000442201 UQCC1Q9NVA1 299 aa6.9□□□□□ -1.31
CCDC39-201ENST00000442201 DNAJB11Q9UBS4 358 aa6.9□□□□□ -1.31
CCDC39-201ENST00000442201 A0A1W2PP11 408 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 OR5B21A6NL26 309 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 IQCF6A8MYZ5 107 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 SEC14L6B5MCN3 397 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 RAB27BO00194 218 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 SPRY1O43609 319 aaPredicted RBP6.89□□□□□ -1.31
CCDC39-201ENST00000442201 ANGPTL7O43827 346 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 F12P00748 615 aaPredicted RBP6.89□□□□□ -1.31
CCDC39-201ENST00000442201 SERPINA2P20848 420 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 FABP6P51161 128 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 GPM6AP51674 278 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 OR2B8PP59922 312 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 SNTB2Q13425 540 aaKnown RBP6.89□□□□□ -1.31
CCDC39-201ENST00000442201 TMEM108Q6UXF1 575 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 GLDNQ6ZMI3 551 aaPredicted RBP6.89□□□□□ -1.31
CCDC39-201ENST00000442201 C22orf34Q6ZV56 151 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 TMEM200AQ86VY9 491 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 WFDC8Q8IUA0 241 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 OR52I2Q8NH67 350 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 OR5P3Q8WZ94 311 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 TNFRSF14Q92956 283 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 CNTNAP3BQ96NU0 1288 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 TMEM100Q9NV29 134 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 ZNF732B4DXR9 585 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 K7EP13 123 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 SPDEFO95238 335 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 IL5P05113 134 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 PTHLHP12272 177 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 PRSS3P35030 304 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 MPV17P39210 176 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 GNG3P63215 75 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 PNLIPRP3Q17RR3 467 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 MOGAT2Q3SYC2 334 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 ZNF626Q68DY1 528 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 ZNF611Q8N823 705 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 ZSCAN4Q8NAM6 433 aaPredicted RBP6.89□□□□□ -1.31
CCDC39-201ENST00000442201 CHST4Q8NCG5 386 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 OR8S1Q8NH09 359 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms