RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 THOC7Q6I9Y2 204 aaKnown RBP5.1□□□□□ -1.59
VPS50-205ENST00000441602 ZNF497Q6ZNH5 498 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 Q6ZR03 302 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 MOGAT3Q86VF5 341 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 OR8H1Q8NGG4 311 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 SECTM1Q8WVN6 248 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 AKR1E2Q96JD6 320 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 SNX22Q96L94 193 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 RTBDNQ9BSG5 229 aaPredicted RBP5.1□□□□□ -1.59
VPS50-205ENST00000441602 RSRP1Q9BUV0 290 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 MRPL37Q9BZE1 423 aaKnown RBP5.1□□□□□ -1.59
VPS50-205ENST00000441602 NMES1Q9C002 83 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 PIPOXQ9P0Z9 390 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 IL36RNQ9UBH0 155 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 SVILO95425 2214 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 INTS1Q8N201 2190 aaKnown RBP5.09□□□□□ -1.59
VPS50-205ENST00000441602 DUXBA0A1W2PPF3 345 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 NPIPB11E5RHQ5 1161 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 MGST3O14880 152 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 RP2O75695 350 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 CD8AP01732 235 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 ADH4P08319 380 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 SLC25A4P12235 298 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 PI3P19957 117 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 PRDX2P32119 198 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 CCKARP32238 428 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 GATA4P43694 442 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 GABRA2P47869 451 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 EIF5AP63241 154 aaKnown RBP5.09□□□□□ -1.59
VPS50-205ENST00000441602 ZNF826PQ6ZT77 177 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 LILRB4Q8NHJ6 448 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 CA5BP1Q8WTZ4 195 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 FAM216AQ8WUB2 273 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 TMEM230Q96A57 120 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 GALNT14Q96FL9 552 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 MFFQ9GZY8 342 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 ZC4H2Q9NQZ6 224 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 KANTRA0A1W2PQU2 76 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 DPRXA6NFQ7 191 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 ATG12O94817 140 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 OR2F2O95006 317 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 OR4A8P0C604 315 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 BSPH1Q075Z2 132 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 OR2F1Q13607 317 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 OPCMLQ14982 345 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 ATXN7L3Q14CW9 347 aaPredicted RBP5.09□□□□□ -1.59
VPS50-205ENST00000441602 TMEM30BQ3MIR4 351 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 PHLDA2Q53GA4 152 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 ZNF660Q6AZW8 331 aaPredicted RBP5.09□□□□□ -1.59
VPS50-205ENST00000441602 TMEM65Q6PI78 240 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 ZBTB34Q8NCN2 500 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 OR10V1Q8NGI7 309 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 GALMQ96C23 342 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 MS4A5Q9H3V2 200 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 OR2W1Q9Y3N9 320 aa5.09□□□□□ -1.59
VPS50-205ENST00000441602 IGHV3-64DA0A0J9YX35 117 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 CCSO14618 274 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 PHF1O43189 567 aaPredicted RBP5.09□□□□□ -1.6
VPS50-205ENST00000441602 TUSC2O75896 110 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 CD55P08174 381 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 SCTP09683 121 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 RPA2P15927 270 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 PSMB6P28072 239 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 COL10A1Q03692 680 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 HMGN3Q15651 99 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 KRBOX4Q5JUW0 171 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 NCMAPQ5T1S8 102 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 LIAT1Q6ZQX7 453 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 NCCRP1Q6ZVX7 275 aaPredicted RBP5.09□□□□□ -1.6
VPS50-205ENST00000441602 ZNF546Q86UE3 836 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 ZNF695Q8IW36 515 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 RNASE11Q8TAA1 199 aaKnown RBP5.09□□□□□ -1.6
VPS50-205ENST00000441602 Q8TCH9 128 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 IL1F10Q8WWZ1 152 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 LURAP1Q96LR2 239 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 HS3ST6Q96QI5 342 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 NCOR1P1Q9H4R4 102 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 SLC2A9Q9NRM0 540 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 OR6C3Q9NZP0 311 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 ZNF581Q9P0T4 197 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 KCNS2Q9ULS6 477 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 TMED3Q9Y3Q3 217 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 RNF115Q9Y4L5 304 aa5.09□□□□□ -1.6
VPS50-205ENST00000441602 EYSQ5T1H1 3165 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 TRBV6-7A0A0A0MS04 114 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 B9A039 149 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 MPPED1O15442 326 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 ARPC5O15511 151 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 IGHV1-46P01743 117 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 HOXB5P09067 269 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 GZMHP20718 246 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 S100A11P31949 105 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 SNRPD2P62316 118 aaKnown RBP5.08□□□□□ -1.6
VPS50-205ENST00000441602 TLE1Q04724 770 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 CATR1Q13166 79 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 MSMO1Q15800 293 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 IGFBP7Q16270 282 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 IGSF11Q5DX21 431 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 C11orf87Q6NUJ2 197 aa5.08□□□□□ -1.6
VPS50-205ENST00000441602 LRP11Q86VZ4 500 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms