RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 TCF19Q9Y242 345 aa11.09□□□□□ -0.63
LTBR-202ENST00000440421 SIGLEC9Q9Y336 463 aa11.09□□□□□ -0.63
LTBR-202ENST00000440421 TOR1AO14656 332 aa11.08□□□□□ -0.64
LTBR-202ENST00000440421 IGHV3-7P01780 117 aa11.08□□□□□ -0.64
LTBR-202ENST00000440421 CRHBPP24387 322 aa11.08□□□□□ -0.64
LTBR-202ENST00000440421 GABRA5P31644 462 aa11.08□□□□□ -0.64
LTBR-202ENST00000440421 MAP2K4P45985 399 aa11.08□□□□□ -0.64
LTBR-202ENST00000440421 KCNJ3P48549 501 aa11.08□□□□□ -0.64
LTBR-202ENST00000440421 GP2P55259 537 aaKnown RBP11.08□□□□□ -0.64
LTBR-202ENST00000440421 PROK1P58294 105 aa11.08□□□□□ -0.64
LTBR-202ENST00000440421 RBM39Q14498 530 aaKnown RBP11.08□□□□□ -0.64
LTBR-202ENST00000440421 MPV17LQ2QL34 196 aa11.08□□□□□ -0.64
LTBR-202ENST00000440421 RBM48Q5RL73 367 aaKnown RBP11.08□□□□□ -0.64
LTBR-202ENST00000440421 CCBE1Q6UXH8 406 aaPredicted RBP11.08□□□□□ -0.64
LTBR-202ENST00000440421 UNQ9370/PRO34162Q6UXP9 181 aa11.08□□□□□ -0.64
LTBR-202ENST00000440421 CEACAM19Q7Z692 300 aa11.08□□□□□ -0.64
LTBR-202ENST00000440421 LINC00596Q86U02 117 aa11.08□□□□□ -0.64
LTBR-202ENST00000440421 RTN4RL2Q86UN3 420 aa11.08□□□□□ -0.64
LTBR-202ENST00000440421 CDH26Q8IXH8 852 aa11.08□□□□□ -0.64
LTBR-202ENST00000440421 NKAIN3Q8N8D7 197 aa11.08□□□□□ -0.64
LTBR-202ENST00000440421 OR4C13Q8NGP0 309 aa11.08□□□□□ -0.64
LTBR-202ENST00000440421 RFESDQ8TAC1 157 aa11.08□□□□□ -0.64
LTBR-202ENST00000440421 ZNF596Q8TC21 504 aa11.08□□□□□ -0.64
LTBR-202ENST00000440421 UFD1Q92890 307 aa11.08□□□□□ -0.64
LTBR-202ENST00000440421 TMEM203Q969S6 136 aa11.08□□□□□ -0.64
LTBR-202ENST00000440421 KIRREL1Q96J84 757 aa11.08□□□□□ -0.64
LTBR-202ENST00000440421 RAB18Q9NP72 206 aa11.08□□□□□ -0.64
LTBR-202ENST00000440421 TMEM30CPA0ZSE6 113 aa11.07□□□□□ -0.64
LTBR-202ENST00000440421 MEGF11A6BM72 1044 aa11.07□□□□□ -0.64
LTBR-202ENST00000440421 F2RL2O00254 374 aa11.07□□□□□ -0.64
LTBR-202ENST00000440421 CRTAPO75718 401 aaPredicted RBP11.07□□□□□ -0.64
LTBR-202ENST00000440421 CGB3P0DN86 165 aa11.07□□□□□ -0.64
LTBR-202ENST00000440421 CGB7P0DN87 165 aa11.07□□□□□ -0.64
LTBR-202ENST00000440421 MGMTP16455 207 aa11.07□□□□□ -0.64
LTBR-202ENST00000440421 CD34P28906 385 aa11.07□□□□□ -0.64
LTBR-202ENST00000440421 SSTR5P35346 364 aa11.07□□□□□ -0.64
LTBR-202ENST00000440421 VHLP40337 213 aa11.07□□□□□ -0.64
LTBR-202ENST00000440421 LIAT1Q6ZQX7 453 aa11.07□□□□□ -0.64
LTBR-202ENST00000440421 LYPD6Q86Y78 171 aa11.07□□□□□ -0.64
LTBR-202ENST00000440421 TMEM104Q8NE00 496 aa11.07□□□□□ -0.64
LTBR-202ENST00000440421 CCDC107Q8WV48 283 aa11.07□□□□□ -0.64
LTBR-202ENST00000440421 LEAP2Q969E1 77 aa11.07□□□□□ -0.64
LTBR-202ENST00000440421 FAM46BQ96A09 425 aa11.07□□□□□ -0.64
LTBR-202ENST00000440421 CITED1Q99966 193 aa11.07□□□□□ -0.64
LTBR-202ENST00000440421 SELENOIQ9C0D9 397 aa11.07□□□□□ -0.64
LTBR-202ENST00000440421 NPFFR1Q9GZQ6 430 aa11.07□□□□□ -0.64
LTBR-202ENST00000440421 NCOR1P1Q9H4R4 102 aa11.07□□□□□ -0.64
LTBR-202ENST00000440421 ZNF696Q9H7X3 374 aa11.07□□□□□ -0.64
LTBR-202ENST00000440421 IDI2-AS1Q9NZ38 188 aa11.07□□□□□ -0.64
LTBR-202ENST00000440421 DPM3Q9P2X0 92 aa11.07□□□□□ -0.64
LTBR-202ENST00000440421 A0A087X0M5 115 aa11.06□□□□□ -0.64
LTBR-202ENST00000440421 A0A1B0GX30 115 aa11.06□□□□□ -0.64
LTBR-202ENST00000440421 A6NDX4 124 aa11.06□□□□□ -0.64
LTBR-202ENST00000440421 LEUTXA8MZ59 168 aa11.06□□□□□ -0.64
LTBR-202ENST00000440421 IL1AP01583 271 aa11.06□□□□□ -0.64
LTBR-202ENST00000440421 IGLV1-47P01700 117 aa11.06□□□□□ -0.64
LTBR-202ENST00000440421 CD24P25063 80 aa11.06□□□□□ -0.64
LTBR-202ENST00000440421 PRRX1P54821 245 aa11.06□□□□□ -0.64
LTBR-202ENST00000440421 RPS25P62851 125 aaKnown RBP11.06□□□□□ -0.64
LTBR-202ENST00000440421 PAX5Q02548 391 aa11.06□□□□□ -0.64
LTBR-202ENST00000440421 GPR50Q13585 617 aa11.06□□□□□ -0.64
LTBR-202ENST00000440421 HLA-DRB5Q30154 266 aa11.06□□□□□ -0.64
LTBR-202ENST00000440421 HSD17B12Q53GQ0 312 aa11.06□□□□□ -0.64
LTBR-202ENST00000440421 PRR31Q5SQ13 230 aa11.06□□□□□ -0.64
LTBR-202ENST00000440421 PRSS48Q7RTY5 328 aa11.06□□□□□ -0.64
LTBR-202ENST00000440421 LRRTM1Q86UE6 522 aa11.06□□□□□ -0.64
LTBR-202ENST00000440421 UBALD1Q8TB05 177 aa11.06□□□□□ -0.64
LTBR-202ENST00000440421 MRPS24Q96EL2 167 aaKnown RBP11.06□□□□□ -0.64
LTBR-202ENST00000440421 UQCC2Q9BRT2 126 aa11.06□□□□□ -0.64
LTBR-202ENST00000440421 FBLN5Q9UBX5 448 aa11.06□□□□□ -0.64
LTBR-202ENST00000440421 RAB26Q9ULW5 256 aa11.06□□□□□ -0.64
LTBR-202ENST00000440421 MCRIP1C9JLW8 97 aa11.05□□□□□ -0.64
LTBR-202ENST00000440421 NPIPB11E5RHQ5 1161 aa11.05□□□□□ -0.64
LTBR-202ENST00000440421 BUB1B-PAK6H3BSN5 160 aa11.05□□□□□ -0.64
LTBR-202ENST00000440421 AIPO00170 330 aa11.05□□□□□ -0.64
LTBR-202ENST00000440421 SC5DO75845 299 aa11.05□□□□□ -0.64
LTBR-202ENST00000440421 SRMP19623 302 aa11.05□□□□□ -0.64
LTBR-202ENST00000440421 KIR2DS4P43632 304 aa11.05□□□□□ -0.64
LTBR-202ENST00000440421 GNG10P50151 68 aa11.05□□□□□ -0.64
LTBR-202ENST00000440421 DYNLT3P51808 116 aa11.05□□□□□ -0.64
LTBR-202ENST00000440421 TPBGQ13641 420 aa11.05□□□□□ -0.64
LTBR-202ENST00000440421 GLT8D1Q68CQ7 371 aa11.05□□□□□ -0.64
LTBR-202ENST00000440421 RAB12Q6IQ22 244 aa11.05□□□□□ -0.64
LTBR-202ENST00000440421 OR9G1Q8NH87 305 aa11.05□□□□□ -0.64
LTBR-202ENST00000440421 OR2T6Q8NHC8 308 aa11.05□□□□□ -0.64
LTBR-202ENST00000440421 PHYHIPQ92561 330 aa11.05□□□□□ -0.64
LTBR-202ENST00000440421 CYYR1Q96J86 154 aa11.05□□□□□ -0.64
LTBR-202ENST00000440421 MGLLQ99685 303 aa11.05□□□□□ -0.64
LTBR-202ENST00000440421 RANBP3Q9H6Z4 567 aaPredicted RBP11.05□□□□□ -0.64
LTBR-202ENST00000440421 SPACA1Q9HBV2 294 aa11.05□□□□□ -0.64
LTBR-202ENST00000440421 RCC2Q9P258 522 aaKnown RBP11.05□□□□□ -0.64
LTBR-202ENST00000440421 PITPNC1Q9UKF7 332 aa11.05□□□□□ -0.64
LTBR-202ENST00000440421 PEX16Q9Y5Y5 336 aa11.05□□□□□ -0.64
LTBR-202ENST00000440421 MPIG6BO95866 241 aa11.04□□□□□ -0.64
LTBR-202ENST00000440421 MT-ND4P03905 459 aa11.04□□□□□ -0.64
LTBR-202ENST00000440421 UCHL1P09936 223 aa11.04□□□□□ -0.64
LTBR-202ENST00000440421 CPEP16870 476 aa11.04□□□□□ -0.64
LTBR-202ENST00000440421 CEACAM3P40198 252 aa11.04□□□□□ -0.64
LTBR-202ENST00000440421 MLLT11Q13015 90 aaPredicted RBP11.04□□□□□ -0.64
LTBR-202ENST00000440421 HABP2Q14520 560 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms