RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 UBE2J1Q9Y385 318 aaPredicted RBP14.07□□□□□ -0.16
CLCNKA-203ENST00000439316 MRPS18CQ9Y3D5 142 aaKnown RBP14.07□□□□□ -0.16
CLCNKA-203ENST00000439316 DUXBA0A1W2PPF3 345 aa14.06□□□□□ -0.16
CLCNKA-203ENST00000439316 CLEC18AA5D8T8 446 aa14.06□□□□□ -0.16
CLCNKA-203ENST00000439316 S100A6P06703 90 aa14.06□□□□□ -0.16
CLCNKA-203ENST00000439316 BCL3P20749 454 aa14.06□□□□□ -0.16
CLCNKA-203ENST00000439316 POLR2GP62487 172 aaKnown RBP eCLIP14.06□□□□□ -0.16
CLCNKA-203ENST00000439316 RAB1AP62820 205 aa14.06□□□□□ -0.16
CLCNKA-203ENST00000439316 KRBOX4Q5JUW0 171 aa14.06□□□□□ -0.16
CLCNKA-203ENST00000439316 ASCL5Q7RTU5 278 aa14.06□□□□□ -0.16
CLCNKA-203ENST00000439316 ZNF695Q8IW36 515 aa14.06□□□□□ -0.16
CLCNKA-203ENST00000439316 SAXO1Q8IYX7 474 aa14.06□□□□□ -0.16
CLCNKA-203ENST00000439316 CLEC18CQ8NCF0 446 aa14.06□□□□□ -0.16
CLCNKA-203ENST00000439316 ABHD3Q8WU67 409 aa14.06□□□□□ -0.16
CLCNKA-203ENST00000439316 CPNE4Q96A23 557 aaPredicted RBP14.06□□□□□ -0.16
CLCNKA-203ENST00000439316 PLEKHF2Q9H8W4 249 aa14.06□□□□□ -0.16
CLCNKA-203ENST00000439316 IL17BQ9UHF5 180 aa14.06□□□□□ -0.16
CLCNKA-203ENST00000439316 A0A1W2PPE3 182 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 ZNF724A8MTY0 619 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 FGF12P61328 243 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 ZNF818PQ6ZRF7 136 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 TMEM252Q8N6L7 170 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 IL22RA1Q8N6P7 574 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 OR56B2PQ8NGI1 322 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 OR2G3Q8NGZ4 309 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 LILRB1Q8NHL6 650 aaPredicted RBP14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 CD300LFQ8TDQ1 290 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 TMEM171Q8WVE6 324 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 ZNF845Q96IR2 970 aaPredicted RBP14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 PAPOLGQ9BWT3 736 aaKnown RBP14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 SLC25A31Q9H0C2 315 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 DEPPQ9NTK1 212 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 METTL1Q9UBP6 276 aaKnown RBP14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 hCG_1809904A0A1W2PP81 198 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 A0A1W2PR64 198 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 A0A1W2PRV1 198 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 TM4SF5O14894 197 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 SSSCA1O60232 199 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 TRAPPC6AO75865 159 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 TUSC2O75896 110 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 TK1P04183 234 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 OR13C7P0DN81 318 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 MAS1LP35410 378 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 GFRA1P56159 465 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 FOXO1Q12778 655 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 HERPUD1Q15011 391 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 NMSQ5H8A3 153 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 SPSB3Q6PJ21 355 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 ZNF565Q8N9K5 539 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 SLAMF9Q96A28 289 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 RFNGQ9Y644 331 aa14.05□□□□□ -0.16
CLCNKA-203ENST00000439316 ZFHX4Q86UP3 3567 aa14.04□□□□□ -0.16
CLCNKA-203ENST00000439316 A0A1B0GV50 99 aa14.04□□□□□ -0.16
CLCNKA-203ENST00000439316 A0A1W2PPE2 198 aa14.04□□□□□ -0.16
CLCNKA-203ENST00000439316 SLC22A20A6NK97 555 aa14.04□□□□□ -0.16
CLCNKA-203ENST00000439316 ADAM20O43506 726 aa14.04□□□□□ -0.16
CLCNKA-203ENST00000439316 CEACAM1P13688 526 aa14.04□□□□□ -0.16
CLCNKA-203ENST00000439316 MMP9P14780 707 aa14.04□□□□□ -0.16
CLCNKA-203ENST00000439316 ZNF14P17017 642 aaPredicted RBP14.04□□□□□ -0.16
CLCNKA-203ENST00000439316 UCP1P25874 307 aa14.04□□□□□ -0.16
CLCNKA-203ENST00000439316 PRDX4Q13162 271 aa14.04□□□□□ -0.16
CLCNKA-203ENST00000439316 SPIN3Q5JUX0 258 aa14.04□□□□□ -0.16
CLCNKA-203ENST00000439316 RBMS3Q6XE24 437 aaKnown RBP14.04□□□□□ -0.16
CLCNKA-203ENST00000439316 ODF3L1Q8IXM7 274 aa14.04□□□□□ -0.16
CLCNKA-203ENST00000439316 GAPTQ8N292 157 aa14.04□□□□□ -0.16
CLCNKA-203ENST00000439316 SUMF2Q8NBJ7 301 aa14.04□□□□□ -0.16
CLCNKA-203ENST00000439316 YPEL4Q96NS1 127 aa14.04□□□□□ -0.16
CLCNKA-203ENST00000439316 SIGLEC12Q96PQ1 595 aa14.04□□□□□ -0.16
CLCNKA-203ENST00000439316 RARRES2Q99969 163 aa14.04□□□□□ -0.16
CLCNKA-203ENST00000439316 REPIN1Q9BWE0 567 aaKnown RBP14.04□□□□□ -0.16
CLCNKA-203ENST00000439316 SEBOXQ9HB31 216 aaPredicted RBP14.04□□□□□ -0.16
CLCNKA-203ENST00000439316 GLRX2Q9NS18 164 aa14.04□□□□□ -0.16
CLCNKA-203ENST00000439316 CRIM1Q9NZV1 1036 aa14.04□□□□□ -0.16
CLCNKA-203ENST00000439316 IGKV1D-13A0A0B4J2D9 117 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 BTBD17A6NE02 478 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 ZNF732B4DXR9 585 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 PROB1E7EW31 1015 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 IGHV2-5P01817 119 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 ARG1P05089 322 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 SCTP09683 121 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 IGKV1-13P0DP09 117 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 GDF1P27539 372 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 CCL20P78556 96 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 CXorf66Q5JRM2 361 aaPredicted RBP14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 SOHLH1Q5JUK2 328 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 SP5Q6BEB4 398 aaPredicted RBP14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 C5orf24Q7Z6I8 188 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 FAM24BQ8N5W8 94 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 PLPPR1Q8TBJ4 325 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 ABHD14AQ9BUJ0 271 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 IGKV3D-15A0A087WSY6 115 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 PINLYPA6NC86 204 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 GPR37O15354 613 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 SERPINA7P05543 415 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 CBR1P16152 277 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 VAMP2P63027 116 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 ID3Q02535 119 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 BAXQ07812 192 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 MPV17LQ2QL34 196 aa14.03□□□□□ -0.16
CLCNKA-203ENST00000439316 HIKESHIQ53FT3 197 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms