RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 S100A8P05109 93 aa13.17□□□□□ -0.3
APP-208ENST00000439274 ZFP36L1Q07352 338 aaKnown RBP13.17□□□□□ -0.3
APP-208ENST00000439274 PRDM14Q9GZV8 571 aa13.17□□□□□ -0.3
APP-208ENST00000439274 SEBOXQ9HB31 216 aaPredicted RBP13.17□□□□□ -0.3
APP-208ENST00000439274 A0A1B0GW64 132 aa13.17□□□□□ -0.3
APP-208ENST00000439274 C5orf49A4QMS7 147 aa13.17□□□□□ -0.3
APP-208ENST00000439274 PMELP40967 661 aa13.17□□□□□ -0.3
APP-208ENST00000439274 NMSQ5H8A3 153 aa13.17□□□□□ -0.3
APP-208ENST00000439274 WDR5BQ86VZ2 330 aa13.17□□□□□ -0.3
APP-208ENST00000439274 ZNF488Q96MN9 340 aa13.17□□□□□ -0.3
APP-208ENST00000439274 TECTBQ96PL2 329 aa13.17□□□□□ -0.3
APP-208ENST00000439274 SPIN2AQ99865 258 aa13.17□□□□□ -0.3
APP-208ENST00000439274 SPIN2BQ9BPZ2 258 aa13.17□□□□□ -0.3
APP-208ENST00000439274 PRRG4Q9BZD6 226 aa13.17□□□□□ -0.3
APP-208ENST00000439274 NOSIPQ9Y314 301 aaKnown RBP13.17□□□□□ -0.3
APP-208ENST00000439274 MMP24Q9Y5R2 645 aa13.17□□□□□ -0.3
APP-208ENST00000439274 FRYQ5TBA9 3013 aa13.17□□□□□ -0.3
APP-208ENST00000439274 H0YL77 283 aa13.16□□□□□ -0.3
APP-208ENST00000439274 H3BP45 60 aa13.16□□□□□ -0.3
APP-208ENST00000439274 SYNGR1O43759 233 aa13.16□□□□□ -0.3
APP-208ENST00000439274 CHST1O43916 411 aa13.16□□□□□ -0.3
APP-208ENST00000439274 CLN5O75503 358 aa13.16□□□□□ -0.3
APP-208ENST00000439274 FABP1P07148 127 aa13.16□□□□□ -0.3
APP-208ENST00000439274 ACER2Q5QJU3 275 aa13.16□□□□□ -0.3
APP-208ENST00000439274 NCMAPQ5T1S8 102 aa13.16□□□□□ -0.3
APP-208ENST00000439274 C20orf204Q6ZNR8 217 aa13.16□□□□□ -0.3
APP-208ENST00000439274 COLCA1Q6ZS62 124 aa13.16□□□□□ -0.3
APP-208ENST00000439274 YPEL4Q96NS1 127 aa13.16□□□□□ -0.3
APP-208ENST00000439274 SLC25A31Q9H0C2 315 aa13.16□□□□□ -0.3
APP-208ENST00000439274 GSN-AS1Q9NRJ2 163 aa13.16□□□□□ -0.3
APP-208ENST00000439274 A0A0G2JRQ6 117 aa13.16□□□□□ -0.3
APP-208ENST00000439274 ZNF732B4DXR9 585 aa13.16□□□□□ -0.3
APP-208ENST00000439274 H3BQ15 152 aa13.16□□□□□ -0.3
APP-208ENST00000439274 MRPL33O75394 65 aaKnown RBP13.16□□□□□ -0.3
APP-208ENST00000439274 FGF12P61328 243 aa13.16□□□□□ -0.3
APP-208ENST00000439274 IZUMO4Q1ZYL8 232 aa13.16□□□□□ -0.3
APP-208ENST00000439274 SPINK14Q6IE38 97 aa13.16□□□□□ -0.3
APP-208ENST00000439274 IL22RA1Q8N6P7 574 aa13.16□□□□□ -0.3
APP-208ENST00000439274 Q8NFD4 153 aa13.16□□□□□ -0.3
APP-208ENST00000439274 CPNE4Q96A23 557 aaPredicted RBP13.16□□□□□ -0.3
APP-208ENST00000439274 RAB39BQ96DA2 213 aa13.16□□□□□ -0.3
APP-208ENST00000439274 REPIN1Q9BWE0 567 aaKnown RBP13.16□□□□□ -0.3
APP-208ENST00000439274 TECTAO75443 2155 aa13.15□□□□□ -0.3
APP-208ENST00000439274 NGFP01138 241 aa13.15□□□□□ -0.3
APP-208ENST00000439274 CELA3AP09093 270 aa13.15□□□□□ -0.3
APP-208ENST00000439274 GFRA1P56159 465 aa13.15□□□□□ -0.3
APP-208ENST00000439274 IGFBP7Q16270 282 aa13.15□□□□□ -0.3
APP-208ENST00000439274 HIKESHIQ53FT3 197 aa13.15□□□□□ -0.3
APP-208ENST00000439274 ZNF343Q6P1L6 599 aa13.15□□□□□ -0.3
APP-208ENST00000439274 P4HA3Q7Z4N8 544 aa13.15□□□□□ -0.3
APP-208ENST00000439274 ZNF251Q9BRH9 671 aa13.15□□□□□ -0.3
APP-208ENST00000439274 HSPA12AO43301 675 aa13.15□□□□□ -0.3
APP-208ENST00000439274 TUSC2O75896 110 aa13.15□□□□□ -0.3
APP-208ENST00000439274 SRP19P09132 144 aaKnown RBP13.15□□□□□ -0.3
APP-208ENST00000439274 UCP1P25874 307 aa13.15□□□□□ -0.3
APP-208ENST00000439274 ID3Q02535 119 aa13.15□□□□□ -0.3
APP-208ENST00000439274 HEPN1Q6WQI6 88 aa13.15□□□□□ -0.3
APP-208ENST00000439274 Q6ZS49 121 aa13.15□□□□□ -0.3
APP-208ENST00000439274 MRPL21Q7Z2W9 205 aaKnown RBP13.15□□□□□ -0.3
APP-208ENST00000439274 ZDHHC23Q8IYP9 409 aa13.15□□□□□ -0.3
APP-208ENST00000439274 CYB561D1Q8N8Q1 229 aa13.15□□□□□ -0.3
APP-208ENST00000439274 TCEAL3Q969E4 200 aa13.15□□□□□ -0.3
APP-208ENST00000439274 MALSU1Q96EH3 234 aa13.15□□□□□ -0.3
APP-208ENST00000439274 ZNF552Q9H707 407 aaPredicted RBP13.15□□□□□ -0.3
APP-208ENST00000439274 CALHM2Q9HA72 323 aa13.15□□□□□ -0.3
APP-208ENST00000439274 TAAR3PQ9P1P4 343 aa13.15□□□□□ -0.3
APP-208ENST00000439274 PCSK5Q92824 1860 aa13.15□□□□□ -0.3
APP-208ENST00000439274 AP4M1O00189 453 aa13.14□□□□□ -0.31
APP-208ENST00000439274 VDAC1P21796 283 aa13.14□□□□□ -0.31
APP-208ENST00000439274 RPS10P46783 165 aaKnown RBP13.14□□□□□ -0.31
APP-208ENST00000439274 PAX9P55771 341 aa13.14□□□□□ -0.31
APP-208ENST00000439274 RAB1AP62820 205 aa13.14□□□□□ -0.31
APP-208ENST00000439274 ICAM4Q14773 271 aa13.14□□□□□ -0.31
APP-208ENST00000439274 MUCL1Q96DR8 90 aa13.14□□□□□ -0.31
APP-208ENST00000439274 TCFL5Q9UL49 500 aa13.14□□□□□ -0.31
APP-208ENST00000439274 WRBO00258 174 aa13.14□□□□□ -0.31
APP-208ENST00000439274 HS3ST1O14792 307 aa13.14□□□□□ -0.31
APP-208ENST00000439274 PGLYRP1O75594 196 aaPredicted RBP13.14□□□□□ -0.31
APP-208ENST00000439274 TAGLN2P37802 199 aaKnown RBP13.14□□□□□ -0.31
APP-208ENST00000439274 TUSC5Q8IXB3 177 aa13.14□□□□□ -0.31
APP-208ENST00000439274 OR51H1Q8NH63 302 aa13.14□□□□□ -0.31
APP-208ENST00000439274 KIAA1456Q9P272 454 aa13.14□□□□□ -0.31
APP-208ENST00000439274 URGCP-MRPS24S4R325 110 aa13.14□□□□□ -0.31
APP-208ENST00000439274 FAM90A10PA6NDY2 464 aa13.13□□□□□ -0.31
APP-208ENST00000439274 FAM90A18PA6NE21 464 aa13.13□□□□□ -0.31
APP-208ENST00000439274 FAM90A16PA6NEW6 464 aa13.13□□□□□ -0.31
APP-208ENST00000439274 FAM90A20PA6NIJ5 464 aa13.13□□□□□ -0.31
APP-208ENST00000439274 FAM90A8PA6NJQ4 464 aa13.13□□□□□ -0.31
APP-208ENST00000439274 FAM90A7PA6NKC0 464 aa13.13□□□□□ -0.31
APP-208ENST00000439274 FAM90A22PA8MWA6 464 aa13.13□□□□□ -0.31
APP-208ENST00000439274 FAM90A12PA8MX19 464 aa13.13□□□□□ -0.31
APP-208ENST00000439274 FAM90A5PA8MXJ8 464 aa13.13□□□□□ -0.31
APP-208ENST00000439274 FAM90A23PA8MXZ1 464 aa13.13□□□□□ -0.31
APP-208ENST00000439274 TRAPPC2LH3BP13 241 aa13.13□□□□□ -0.31
APP-208ENST00000439274 LILRA1O75019 489 aa13.13□□□□□ -0.31
APP-208ENST00000439274 FAM90A15PP0C7V4 464 aa13.13□□□□□ -0.31
APP-208ENST00000439274 FAM90A13PP0C7W8 464 aa13.13□□□□□ -0.31
APP-208ENST00000439274 FAM90A14PP0C7W9 464 aa13.13□□□□□ -0.31
APP-208ENST00000439274 FAM90A24PP0C7X0 464 aa13.13□□□□□ -0.31
APP-208ENST00000439274 CYB561P49447 251 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms