RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 IGKV1D-43A0A0B4J1Z2 117 aa13.78□□□□□ -0.2
DHFR-201ENST00000439211 CCL25O15444 150 aa13.78□□□□□ -0.2
DHFR-201ENST00000439211 ZNF121P58317 390 aaPredicted RBP13.78□□□□□ -0.2
DHFR-201ENST00000439211 FNDC7Q5VTL7 733 aa13.78□□□□□ -0.2
DHFR-201ENST00000439211 GCNT2Q8N0V5 402 aa13.78□□□□□ -0.2
DHFR-201ENST00000439211 OR5L1Q8NGL2 311 aa13.78□□□□□ -0.2
DHFR-201ENST00000439211 HSPB9Q9BQS6 159 aa13.78□□□□□ -0.2
DHFR-201ENST00000439211 ANGPTL4Q9BY76 406 aa13.78□□□□□ -0.2
DHFR-201ENST00000439211 PLEKHJ1Q9NW61 149 aa13.78□□□□□ -0.2
DHFR-201ENST00000439211 PTPRZ1P23471 2315 aaPredicted RBP13.78□□□□□ -0.2
DHFR-201ENST00000439211 ONECUT2O95948 504 aa13.78□□□□□ -0.2
DHFR-201ENST00000439211 OR3A4PP47883 348 aa13.78□□□□□ -0.2
DHFR-201ENST00000439211 RNF166Q96A37 237 aaPredicted RBP13.78□□□□□ -0.2
DHFR-201ENST00000439211 TMEM230Q96A57 120 aa13.78□□□□□ -0.2
DHFR-201ENST00000439211 TRDCB7Z8K6 153 aa13.77□□□□□ -0.2
DHFR-201ENST00000439211 K7ERU9 68 aa13.77□□□□□ -0.2
DHFR-201ENST00000439211 MSTNO14793 375 aa13.77□□□□□ -0.2
DHFR-201ENST00000439211 BSXQ3C1V8 233 aa13.77□□□□□ -0.2
DHFR-201ENST00000439211 RAET1LQ5VY80 246 aa13.77□□□□□ -0.2
DHFR-201ENST00000439211 ZNF519Q8TB69 540 aa13.77□□□□□ -0.2
DHFR-201ENST00000439211 ZCCHC14Q8WYQ9 949 aaKnown RBP13.77□□□□□ -0.2
DHFR-201ENST00000439211 ARHGAP5-AS1Q96IT6 56 aa13.77□□□□□ -0.2
DHFR-201ENST00000439211 ALKBH3Q96Q83 286 aaPredicted RBP13.77□□□□□ -0.2
DHFR-201ENST00000439211 ZNF430Q9H8G1 570 aaPredicted RBP13.77□□□□□ -0.2
DHFR-201ENST00000439211 Q9N2K0 584 aa13.77□□□□□ -0.2
DHFR-201ENST00000439211 GSTP1P09211 210 aaKnown RBP13.77□□□□□ -0.21
DHFR-201ENST00000439211 SUCLG1P53597 346 aaKnown RBP13.77□□□□□ -0.21
DHFR-201ENST00000439211 CLDN17P56750 224 aa13.77□□□□□ -0.21
DHFR-201ENST00000439211 MYBPHQ13203 477 aa13.77□□□□□ -0.21
DHFR-201ENST00000439211 SPIN3Q5JUX0 258 aa13.77□□□□□ -0.21
DHFR-201ENST00000439211 ATP5SQ99766 215 aa13.77□□□□□ -0.21
DHFR-201ENST00000439211 CTDSP1Q9GZU7 261 aa13.77□□□□□ -0.21
DHFR-201ENST00000439211 WFDC1Q9HC57 220 aa13.77□□□□□ -0.21
DHFR-201ENST00000439211 PLEK2Q9NYT0 353 aa13.77□□□□□ -0.21
DHFR-201ENST00000439211 PRSS50Q9UI38 385 aa13.77□□□□□ -0.21
DHFR-201ENST00000439211 RNF212BA8MTL3 300 aa13.77□□□□□ -0.21
DHFR-201ENST00000439211 IGKV3-11P04433 115 aa13.77□□□□□ -0.21
DHFR-201ENST00000439211 FCGR2AP12318 317 aa13.77□□□□□ -0.21
DHFR-201ENST00000439211 FAM3BP58499 235 aaPredicted RBP13.77□□□□□ -0.21
DHFR-201ENST00000439211 OR5C1Q8NGR4 320 aa13.77□□□□□ -0.21
DHFR-201ENST00000439211 PCED1AQ9H1Q7 454 aa13.77□□□□□ -0.21
DHFR-201ENST00000439211 LMO7DNF2Z398 122 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 TSPAN2O60636 221 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 BPNT1O95861 308 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 TTRP02766 147 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 DUSP1P28562 367 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 ICAM4Q14773 271 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 UNQ5815/PRO19632Q6UWF5 114 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 SYT13Q7L8C5 426 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 SLC24A4Q8NFF2 622 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 GNPNAT1Q96EK6 184 aaPredicted RBP13.76□□□□□ -0.21
DHFR-201ENST00000439211 OR6C1Q96RD1 312 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 OR10A2Q9H208 303 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 IL19Q9UHD0 177 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 TRBV24-1A0A075B6N3 115 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 TMEM238C9JI98 176 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 PRSS12P56730 875 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 PIGPP57054 158 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 IL24Q13007 206 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 TMEM241Q24JQ0 296 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 C16orf54Q6UWD8 224 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 ASB10Q8WXI3 467 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 GLRX2Q9NS18 164 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 CHRNA7P36544 502 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 SELENOTP62341 195 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 Q6ZVH6 145 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 STARD4Q96DR4 205 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 RNF2Q99496 336 aa13.76□□□□□ -0.21
DHFR-201ENST00000439211 RALGAPA1Q6GYQ0 2036 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 DOCK11Q5JSL3 2073 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 IL6RP08887 468 aaPredicted RBP13.75□□□□□ -0.21
DHFR-201ENST00000439211 UBE2G2P60604 165 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 UBE2V1Q13404 147 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.75□□□□□ -0.21
DHFR-201ENST00000439211 TSPO2Q5TGU0 170 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 ZNF576Q9H609 170 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 A0A1B0GU03 582 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 NPIPA2E9PIF3 369 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 NPIPA3F8WFD2 350 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 PHF1O43189 567 aaPredicted RBP13.75□□□□□ -0.21
DHFR-201ENST00000439211 SSSCA1O60232 199 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 TMEM108Q6UXF1 575 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 OR2C3Q8N628 320 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 LYPD6BQ8NI32 183 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 FAM131CQ96AQ9 280 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 ZNF665Q9H7R5 613 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 ZDHHC11Q9H8X9 412 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 G6PC2Q9NQR9 355 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 NXT1Q9UKK6 140 aaKnown RBP13.75□□□□□ -0.21
DHFR-201ENST00000439211 TCFL5Q9UL49 500 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 UBE2J1Q9Y385 318 aaPredicted RBP13.75□□□□□ -0.21
DHFR-201ENST00000439211 IGHV1OR21-1A0A087WYE8 117 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 MS4A18H0YCH9 400 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 MS4A18Q3C1V0 323 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 FDX2Q6P4F2 183 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 SIGLECL1Q8N7X8 197 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 OR10S1Q8NGN2 331 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 ST8SIA1Q92185 356 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 MRGPRFQ96AM1 343 aa13.75□□□□□ -0.21
DHFR-201ENST00000439211 VCANP13611 3396 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms