RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 ZNF826PQ6ZT77 177 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 ZNF837Q96EG3 531 aaPredicted RBP10.66□□□□□ -0.7
TCOF1-205ENST00000439160 LINC00052Q96N35 136 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 MS4A7Q9GZW8 240 aaPredicted RBP10.66□□□□□ -0.7
TCOF1-205ENST00000439160 ZNF407Q9C0G0 2248 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 MGST1P10620 155 aaKnown RBP10.66□□□□□ -0.7
TCOF1-205ENST00000439160 AKR1C3P42330 323 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 TMEM255AQ5JRV8 349 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 LYZL2Q7Z4W2 148 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 NIT2Q9NQR4 276 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 MDFIC2A0A1B0GVS7 189 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 C7orf66A4D0T2 115 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 SYNGR1O43759 233 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 LYPD3O95274 346 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 VSIG10L2P0DP72 767 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 FGF7P21781 194 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 TMEM33P57088 247 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 RPL7L1Q6DKI1 246 aaKnown RBP10.66□□□□□ -0.7
TCOF1-205ENST00000439160 KCNIP4Q6PIL6 250 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 LIAT1Q6ZQX7 453 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 OR4F5Q8NH21 305 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 ACY3Q96HD9 319 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 OR4F4Q96R69 305 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 ZNF251Q9BRH9 671 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 SOX7Q9BT81 388 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 ACTR3CQ9C0K3 210 aaPredicted RBP10.66□□□□□ -0.7
TCOF1-205ENST00000439160 SMCO4Q9NRQ5 59 aa10.66□□□□□ -0.7
TCOF1-205ENST00000439160 RYDENQ9NUL5 291 aaKnown RBP10.66□□□□□ -0.7
TCOF1-205ENST00000439160 FCGR3AP08637 254 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 TLE1Q04724 770 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 FDX2Q6P4F2 183 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 RNF7Q9UBF6 113 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 ABCA4P78363 2273 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 MUC6Q6W4X9 2439 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 PCNTO95613 3336 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 TRAV38-1A0A0B4J264 116 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 A0A1W2PRD5 423 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 A0A1W2PRF3 423 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 A0A1W2PRM7 423 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 OR5H1A6NKK0 313 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 HMSDA8MTL9 139 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 ZNF727A8MUV8 499 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 RPL36A-HNRNPH2H7BZ11 118 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 HRASP01112 189 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 SLC25A6P12236 298 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 RAB13P51153 203 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 OR1K1Q8NGR3 316 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 MITD1Q8WV92 249 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 KLHDC3Q9BQ90 382 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 MST1P26927 711 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 IGFBP7Q16270 282 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 C10orf128Q5T292 105 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 CMTM2Q8TAZ6 248 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 ADAMTS17Q8TE56 1095 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 WNT2BQ93097 391 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 POM121L2Q96KW2 1035 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 GHITMQ9H3K2 345 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 RHOFQ9HBH0 211 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 OSGIN2Q9Y236 505 aa10.65□□□□□ -0.7
TCOF1-205ENST00000439160 LOC102723996A0A087X1L8 192 aa10.65□□□□□ -0.71
TCOF1-205ENST00000439160 TUBAL3A6NHL2 446 aa10.65□□□□□ -0.71
TCOF1-205ENST00000439160 F6UZH7 168 aa10.65□□□□□ -0.71
TCOF1-205ENST00000439160 SOX15O60248 233 aa10.65□□□□□ -0.71
TCOF1-205ENST00000439160 VDAC1P21796 283 aa10.65□□□□□ -0.71
TCOF1-205ENST00000439160 IGSF11Q5DX21 431 aa10.65□□□□□ -0.71
TCOF1-205ENST00000439160 FNDC7Q5VTL7 733 aa10.65□□□□□ -0.71
TCOF1-205ENST00000439160 TRAT1Q6PIZ9 186 aa10.65□□□□□ -0.71
TCOF1-205ENST00000439160 RAB40CQ96S21 281 aa10.65□□□□□ -0.71
TCOF1-205ENST00000439160 GAL3ST2Q9H3Q3 398 aa10.65□□□□□ -0.71
TCOF1-205ENST00000439160 GNB4Q9HAV0 340 aa10.65□□□□□ -0.71
TCOF1-205ENST00000439160 FAM96BQ9Y3D0 163 aa10.65□□□□□ -0.71
TCOF1-205ENST00000439160 MT-ND4LP03901 98 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 TMEM11P17152 192 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 ACOT6Q3I5F7 207 aaPredicted RBP10.64□□□□□ -0.71
TCOF1-205ENST00000439160 RPEQ96AT9 228 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 PPP1R14DQ9NXH3 145 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 A0A087WV48 116 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 OOEPA6NGQ2 149 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 NTN3O00634 580 aaPredicted RBP10.64□□□□□ -0.71
TCOF1-205ENST00000439160 GZMHP20718 246 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 HLA-DRB3P79483 266 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 MRPS11P82912 194 aaKnown RBP10.64□□□□□ -0.71
TCOF1-205ENST00000439160 KRTCAP3Q53RY4 240 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 C19orf48Q6RUI8 117 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 CORO2AQ92828 525 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 OR2W1Q9Y3N9 320 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 PRR19A6NJB7 356 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 RAB5CP51148 216 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 RAB7AP51149 207 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 OR2B8PP59922 312 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 FAM3AP98173 230 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 ENDOGQ14249 297 aaKnown RBP10.64□□□□□ -0.71
TCOF1-205ENST00000439160 MIDNQ504T8 468 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 ZNF441Q8N8Z8 693 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 UQCC1Q9NVA1 299 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 IL36GQ9NZH8 169 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 ANAPC1Q9H1A4 1944 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 PRF1P14222 555 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 UBE2G2P60604 165 aa10.64□□□□□ -0.71
TCOF1-205ENST00000439160 FLI1Q01543 452 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms