RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 PPIAL4GP0DN37 164 aa15.2■□□□□ 0.02
HDAC6-208ENST00000438518 CR1LQ2VPA4 569 aa15.2■□□□□ 0.02
HDAC6-208ENST00000438518 CDNFQ49AH0 187 aa15.2■□□□□ 0.02
HDAC6-208ENST00000438518 C6orf183Q5T699 404 aa15.2■□□□□ 0.02
HDAC6-208ENST00000438518 HACD4Q5VWC8 232 aa15.2■□□□□ 0.02
HDAC6-208ENST00000438518 MOB1BQ7L9L4 216 aa15.2■□□□□ 0.02
HDAC6-208ENST00000438518 LAX1Q8IWV1 398 aa15.2■□□□□ 0.02
HDAC6-208ENST00000438518 OR4M2Q8NGB6 313 aa15.2■□□□□ 0.02
HDAC6-208ENST00000438518 CMSS1Q9BQ75 279 aaKnown RBP15.2■□□□□ 0.02
HDAC6-208ENST00000438518 TMUB1Q9BVT8 246 aa15.2■□□□□ 0.02
HDAC6-208ENST00000438518 MIXL1Q9H2W2 232 aa15.2■□□□□ 0.02
HDAC6-208ENST00000438518 GAL3ST2Q9H3Q3 398 aa15.2■□□□□ 0.02
HDAC6-208ENST00000438518 TAS2R3Q9NYW6 316 aa15.2■□□□□ 0.02
HDAC6-208ENST00000438518 EXTL2Q9UBQ6 330 aa15.2■□□□□ 0.02
HDAC6-208ENST00000438518 OPN4Q9UHM6 478 aa15.2■□□□□ 0.02
HDAC6-208ENST00000438518 KCNK7Q9Y2U2 307 aa15.2■□□□□ 0.02
HDAC6-208ENST00000438518 INSIG2Q9Y5U4 225 aa15.2■□□□□ 0.02
HDAC6-208ENST00000438518 NOTCH2Q04721 2471 aa15.19■□□□□ 0.02
HDAC6-208ENST00000438518 ITPR3Q14573 2671 aa15.19■□□□□ 0.02
HDAC6-208ENST00000438518 TRAV18A0A075B6X5 111 aa15.19■□□□□ 0.02
HDAC6-208ENST00000438518 hCG_1809904A0A1W2PP81 198 aa15.19■□□□□ 0.02
HDAC6-208ENST00000438518 A0A1W2PPE2 198 aa15.19■□□□□ 0.02
HDAC6-208ENST00000438518 A0A1W2PR64 198 aa15.19■□□□□ 0.02
HDAC6-208ENST00000438518 A0A1W2PRV1 198 aa15.19■□□□□ 0.02
HDAC6-208ENST00000438518 SMAD7O15105 426 aaKnown RBP15.19■□□□□ 0.02
HDAC6-208ENST00000438518 NAPSAO96009 420 aa15.19■□□□□ 0.02
HDAC6-208ENST00000438518 MT-ND4P03905 459 aa15.19■□□□□ 0.02
HDAC6-208ENST00000438518 CD99P14209 185 aa15.19■□□□□ 0.02
HDAC6-208ENST00000438518 GNB3P16520 340 aa15.19■□□□□ 0.02
HDAC6-208ENST00000438518 GZMHP20718 246 aa15.19■□□□□ 0.02
HDAC6-208ENST00000438518 GLIPR1P48060 266 aa15.19■□□□□ 0.02
HDAC6-208ENST00000438518 TAS2R20P59543 309 aa15.19■□□□□ 0.02
HDAC6-208ENST00000438518 BRICD5Q6PL45 260 aa15.19■□□□□ 0.02
HDAC6-208ENST00000438518 METAP1DQ6UB28 335 aaPredicted RBP15.19■□□□□ 0.02
HDAC6-208ENST00000438518 FAM185AQ8N0U4 392 aa15.19■□□□□ 0.02
HDAC6-208ENST00000438518 FGFRL1Q8N441 504 aa15.19■□□□□ 0.02
HDAC6-208ENST00000438518 C19orf12Q9NSK7 152 aa15.19■□□□□ 0.02
HDAC6-208ENST00000438518 MBNL3Q9NUK0 354 aaKnown RBP15.19■□□□□ 0.02
HDAC6-208ENST00000438518 AK3Q9UIJ7 227 aa15.19■□□□□ 0.02
HDAC6-208ENST00000438518 KIF25Q9UIL4 384 aa15.19■□□□□ 0.02
HDAC6-208ENST00000438518 KPTNQ9Y664 436 aa15.19■□□□□ 0.02
HDAC6-208ENST00000438518 MYO9AB2RTY4 2548 aa15.18■□□□□ 0.02
HDAC6-208ENST00000438518 ZNF729A6NN14 1252 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-208ENST00000438518 M0R1W7 72 aa15.18■□□□□ 0.02
HDAC6-208ENST00000438518 CD5LO43866 347 aa15.18■□□□□ 0.02
HDAC6-208ENST00000438518 TGFAP01135 160 aa15.18■□□□□ 0.02
HDAC6-208ENST00000438518 GNG2P59768 71 aa15.18■□□□□ 0.02
HDAC6-208ENST00000438518 ARFRP1Q13795 201 aa15.18■□□□□ 0.02
HDAC6-208ENST00000438518 SRSF7Q16629 238 aaKnown RBP eCLIP15.18■□□□□ 0.02
HDAC6-208ENST00000438518 DCAF12L2Q5VW00 463 aa15.18■□□□□ 0.02
HDAC6-208ENST00000438518 TMEM200BQ69YZ2 307 aa15.18■□□□□ 0.02
HDAC6-208ENST00000438518 C1orf122Q6ZSJ8 110 aa15.18■□□□□ 0.02
HDAC6-208ENST00000438518 TRAPPC6BQ86SZ2 158 aa15.18■□□□□ 0.02
HDAC6-208ENST00000438518 OR4M1Q8NGD0 313 aa15.18■□□□□ 0.02
HDAC6-208ENST00000438518 MRPL30Q8TCC3 161 aaKnown RBP15.18■□□□□ 0.02
HDAC6-208ENST00000438518 DIRAS2Q96HU8 199 aa15.18■□□□□ 0.02
HDAC6-208ENST00000438518 ZNF714Q96N38 554 aa15.18■□□□□ 0.02
HDAC6-208ENST00000438518 AUNIPQ9H7T9 357 aa15.18■□□□□ 0.02
HDAC6-208ENST00000438518 LPAR2Q9HBW0 351 aa15.18■□□□□ 0.02
HDAC6-208ENST00000438518 CHMP1AQ9HD42 196 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-208ENST00000438518 HIF1ANQ9NWT6 349 aa15.18■□□□□ 0.02
HDAC6-208ENST00000438518 TRAPPC2LQ9UL33 140 aa15.18■□□□□ 0.02
HDAC6-208ENST00000438518 MALRD1Q5VYJ5 2156 aa15.17■□□□□ 0.02
HDAC6-208ENST00000438518 TMEM235A6NFC5 223 aa15.17■□□□□ 0.02
HDAC6-208ENST00000438518 DTYMKP23919 212 aa15.17■□□□□ 0.02
HDAC6-208ENST00000438518 CBX5P45973 191 aa15.17■□□□□ 0.02
HDAC6-208ENST00000438518 MRPS10P82664 201 aaKnown RBP15.17■□□□□ 0.02
HDAC6-208ENST00000438518 TMEM30BQ3MIR4 351 aa15.17■□□□□ 0.02
HDAC6-208ENST00000438518 CNIH2Q6PI25 160 aa15.17■□□□□ 0.02
HDAC6-208ENST00000438518 TEX29Q8N6K0 151 aa15.17■□□□□ 0.02
HDAC6-208ENST00000438518 TPRX1Q8N7U7 411 aa15.17■□□□□ 0.02
HDAC6-208ENST00000438518 ZMAT3Q9HA38 289 aaKnown RBP15.17■□□□□ 0.02
HDAC6-208ENST00000438518 ABCA2Q9BZC7 2435 aa15.16■□□□□ 0.02
HDAC6-208ENST00000438518 SULT1C2O00338 296 aa15.16■□□□□ 0.02
HDAC6-208ENST00000438518 ORC5O43913 435 aa15.16■□□□□ 0.02
HDAC6-208ENST00000438518 ZNF728P0DKX0 622 aa15.16■□□□□ 0.02
HDAC6-208ENST00000438518 ZNF16P17020 682 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-208ENST00000438518 PTBP1P26599 531 aaKnown RBP eCLIP15.16■□□□□ 0.02
HDAC6-208ENST00000438518 TNFSF8P32971 234 aa15.16■□□□□ 0.02
HDAC6-208ENST00000438518 METTL11BQ5VVY1 283 aa15.16■□□□□ 0.02
HDAC6-208ENST00000438518 PYHIN1Q6K0P9 492 aa15.16■□□□□ 0.02
HDAC6-208ENST00000438518 ZNF880Q6PDB4 577 aa15.16■□□□□ 0.02
HDAC6-208ENST00000438518 TCF23Q7RTU1 214 aa15.16■□□□□ 0.02
HDAC6-208ENST00000438518 OR10A7Q8NGE5 316 aa15.16■□□□□ 0.02
HDAC6-208ENST00000438518 OR6Q1Q8NGQ2 317 aa15.16■□□□□ 0.02
HDAC6-208ENST00000438518 DYRK2Q92630 601 aa15.16■□□□□ 0.02
HDAC6-208ENST00000438518 SCPEP1Q9HB40 452 aa15.16■□□□□ 0.02
HDAC6-208ENST00000438518 MMP26Q9NRE1 261 aa15.16■□□□□ 0.02
HDAC6-208ENST00000438518 KCNIP1Q9NZI2 227 aa15.16■□□□□ 0.02
HDAC6-208ENST00000438518 KCNS2Q9ULS6 477 aa15.16■□□□□ 0.02
HDAC6-208ENST00000438518 C17orf98A8MV24 154 aa15.15■□□□□ 0.02
HDAC6-208ENST00000438518 HLA-DQB1P01920 261 aa15.15■□□□□ 0.02
HDAC6-208ENST00000438518 GLP1RP43220 463 aa15.15■□□□□ 0.02
HDAC6-208ENST00000438518 PAX8Q06710 450 aa15.15■□□□□ 0.02
HDAC6-208ENST00000438518 ZNF273Q14593 569 aa15.15■□□□□ 0.02
HDAC6-208ENST00000438518 Q6ZS49 121 aa15.15■□□□□ 0.02
HDAC6-208ENST00000438518 OR13A1Q8NGR1 328 aa15.15■□□□□ 0.02
HDAC6-208ENST00000438518 OR4K15Q8NH41 348 aa15.15■□□□□ 0.02
HDAC6-208ENST00000438518 METTL8Q9H825 291 aaKnown RBP15.15■□□□□ 0.02
HDAC6-208ENST00000438518 LINC00574Q9H8X3 128 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms