RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 TREM1Q9NP99 234 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 SLC2A9Q9NRM0 540 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 MSRB2Q9Y3D2 182 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 A6NJY4 79 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 ZNF891A8MT65 544 aaPredicted RBP8.11□□□□□ -1.11
CUX1-206ENST00000437600 H2AFB1P0C5Y9 115 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 HKR1P10072 659 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 RPL12P30050 165 aaKnown RBP8.11□□□□□ -1.11
CUX1-206ENST00000437600 LHFPL2Q6ZUX7 228 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 IL1F10Q8WWZ1 152 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 WDYHV1Q96HA8 205 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 TLNRD1Q9H1K6 362 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 GSN-AS1Q9NRJ2 163 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 NECAP2Q9NVZ3 263 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 SVEP1Q4LDE5 3571 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 TRBV23-1A0A0A0MS06 115 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 SLC22A20A6NK97 555 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 CEACAM18A8MTB9 384 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 MBPP02686 304 aaPredicted RBP8.11□□□□□ -1.11
CUX1-206ENST00000437600 FAM157CP0CG43 387 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 TPT1P13693 172 aaKnown RBP8.11□□□□□ -1.11
CUX1-206ENST00000437600 ADCYAP1P18509 176 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 AKR1C3P42330 323 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 PCBD1P61457 104 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 TMEM42Q69YG0 159 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 CXorf67Q86X51 503 aaPredicted RBP8.11□□□□□ -1.11
CUX1-206ENST00000437600 CNEP1R1Q8N9A8 125 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 SCGB3A2Q96PL1 93 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 TAF9BQ9HBM6 251 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 ZNF71Q9NQZ8 489 aaPredicted RBP8.11□□□□□ -1.11
CUX1-206ENST00000437600 C1orf123Q9NWV4 160 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 DOCK11Q5JSL3 2073 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 K7EPK0 472 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 HSD17B6O14756 317 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 SNAPC5O75971 98 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 RBM11P57052 281 aaKnown RBP8.1□□□□□ -1.11
CUX1-206ENST00000437600 IL15RAQ13261 267 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 RIPPLY2Q5TAB7 128 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 FAM53AQ6NSI3 398 aaPredicted RBP8.1□□□□□ -1.11
CUX1-206ENST00000437600 P4HA3Q7Z4N8 544 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 SVBPQ8N300 66 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 FAM71E2Q8N5Q1 922 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 OR4A4PQ8NGN8 299 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 CNTNAP3BQ96NU0 1288 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 TRIB1Q96RU8 372 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 REPIN1Q9BWE0 567 aaKnown RBP8.1□□□□□ -1.11
CUX1-206ENST00000437600 C1QTNF5Q9BXJ0 243 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 CNTNAP3Q9BZ76 1288 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 SLC5A7Q9GZV3 580 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 NIT2Q9NQR4 276 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 RCL1Q9Y2P8 373 aaKnown RBP8.1□□□□□ -1.11
CUX1-206ENST00000437600 KCNIP3Q9Y2W7 256 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 ARHGAP21Q5T5U3 1957 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 IGKV1D-13A0A0B4J2D9 117 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 CRYM-AS1A6NIL9 109 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 LYZL6O75951 148 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 TACC2O95359 2948 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 CRYBA1P05813 215 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 S100A9P06702 114 aaKnown RBP8.1□□□□□ -1.11
CUX1-206ENST00000437600 IGKV1-13P0DP09 117 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 FUT3P21217 361 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 WNT5AP41221 380 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 CASP6P55212 293 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 OR8B8Q15620 311 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 FAM189A2Q15884 450 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 CYB5R2Q6BCY4 276 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 RBMS3Q6XE24 437 aaKnown RBP8.1□□□□□ -1.11
CUX1-206ENST00000437600 ETV3LQ6ZN32 361 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 FBXL17Q9UF56 701 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 LRBAP50851 2863 aa8.1□□□□□ -1.11
CUX1-206ENST00000437600 IGKV3D-15A0A087WSY6 115 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 C9JQL5 133 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 PDCD6O75340 191 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 MED6O75586 246 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 NFYBP25208 207 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 LPAR6P43657 344 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 DHRS11Q6UWP2 260 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 SPAG16Q8N0X2 631 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 HSD17B11Q8NBQ5 300 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 TAAR6Q96RI8 345 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 FZR1Q9UM11 496 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 USF3Q68DE3 2245 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 TRBV6-7A0A0A0MS04 114 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 CD300LBA8K4G0 201 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 IL18BPO95998 194 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 IFNA21P01568 189 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 CTSDP07339 412 aaPredicted RBP8.09□□□□□ -1.11
CUX1-206ENST00000437600 GNRHRP30968 328 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 PLA2G5P39877 138 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 SNRPEP62304 92 aaKnown RBP8.09□□□□□ -1.11
CUX1-206ENST00000437600 BLOC1S1P78537 153 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 HNF4GQ14541 408 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 PPA1Q15181 289 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 TMEM268Q5VZI3 342 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 DMRTC2Q8IXT2 367 aaPredicted RBP8.09□□□□□ -1.11
CUX1-206ENST00000437600 SLC35G3Q8N808 338 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 SH3BGRL3Q9H299 93 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 ZDHHC11Q9H8X9 412 aa8.09□□□□□ -1.11
CUX1-206ENST00000437600 AGFG2O95081 481 aa8.08□□□□□ -1.12
CUX1-206ENST00000437600 PPYP01298 95 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms