RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 SMLR1H3BR10 107 aa13.57□□□□□ -0.24
NEDD4-202ENST00000435532 NAT2P11245 290 aa13.57□□□□□ -0.24
NEDD4-202ENST00000435532 RBM11P57052 281 aaKnown RBP13.57□□□□□ -0.24
NEDD4-202ENST00000435532 HAGHQ16775 308 aa13.57□□□□□ -0.24
NEDD4-202ENST00000435532 TMEM30BQ3MIR4 351 aa13.57□□□□□ -0.24
NEDD4-202ENST00000435532 PKIBQ9C010 78 aa13.57□□□□□ -0.24
NEDD4-202ENST00000435532 OR2W1Q9Y3N9 320 aa13.57□□□□□ -0.24
NEDD4-202ENST00000435532 PYCARD-AS1I3L0S3 204 aa13.57□□□□□ -0.24
NEDD4-202ENST00000435532 PCSK4Q6UW60 755 aa13.57□□□□□ -0.24
NEDD4-202ENST00000435532 POMT1Q9Y6A1 747 aa13.57□□□□□ -0.24
NEDD4-202ENST00000435532 ZNF727A8MUV8 499 aa13.57□□□□□ -0.24
NEDD4-202ENST00000435532 GGNBP1Q5YKI7 109 aa13.57□□□□□ -0.24
NEDD4-202ENST00000435532 GLDNQ6ZMI3 551 aaPredicted RBP13.57□□□□□ -0.24
NEDD4-202ENST00000435532 TMEM123Q8N131 208 aa13.57□□□□□ -0.24
NEDD4-202ENST00000435532 PPP1R1CQ8WVI7 109 aa13.57□□□□□ -0.24
NEDD4-202ENST00000435532 SLC25A32Q9H2D1 315 aa13.57□□□□□ -0.24
NEDD4-202ENST00000435532 ARID2Q68CP9 1835 aa13.57□□□□□ -0.24
NEDD4-202ENST00000435532 PSME4Q14997 1843 aa13.57□□□□□ -0.24
NEDD4-202ENST00000435532 ONECUT2O95948 504 aa13.57□□□□□ -0.24
NEDD4-202ENST00000435532 OPN1MWP04001 364 aa13.57□□□□□ -0.24
NEDD4-202ENST00000435532 OPN1MW2P0DN77 364 aa13.57□□□□□ -0.24
NEDD4-202ENST00000435532 OPN1MW3P0DN78 364 aa13.57□□□□□ -0.24
NEDD4-202ENST00000435532 MRPL14Q6P1L8 145 aaKnown RBP13.57□□□□□ -0.24
NEDD4-202ENST00000435532 LIAT1Q6ZQX7 453 aa13.57□□□□□ -0.24
NEDD4-202ENST00000435532 PRSS27Q9BQR3 290 aa13.57□□□□□ -0.24
NEDD4-202ENST00000435532 H7BYZ3 331 aa13.57□□□□□ -0.24
NEDD4-202ENST00000435532 PARP12Q9H0J9 701 aaKnown RBP13.57□□□□□ -0.24
NEDD4-202ENST00000435532 PPIAL4CA0A0B4J2A2 164 aa13.56□□□□□ -0.24
NEDD4-202ENST00000435532 CST7O76096 145 aa13.56□□□□□ -0.24
NEDD4-202ENST00000435532 PPIAL4GP0DN37 164 aa13.56□□□□□ -0.24
NEDD4-202ENST00000435532 RPS4Y1P22090 263 aaKnown RBP13.56□□□□□ -0.24
NEDD4-202ENST00000435532 DCAF12L2Q5VW00 463 aa13.56□□□□□ -0.24
NEDD4-202ENST00000435532 OR10AC1Q8NH08 325 aa13.56□□□□□ -0.24
NEDD4-202ENST00000435532 OR5AC1P0C628 307 aa13.56□□□□□ -0.24
NEDD4-202ENST00000435532 PRDM14Q9GZV8 571 aa13.56□□□□□ -0.24
NEDD4-202ENST00000435532 RHOFQ9HBH0 211 aa13.56□□□□□ -0.24
NEDD4-202ENST00000435532 ZNF107Q9UII5 783 aaPredicted RBP13.56□□□□□ -0.24
NEDD4-202ENST00000435532 PIGYQ3MUY2 71 aa13.56□□□□□ -0.24
NEDD4-202ENST00000435532 OR1B1Q8NGR6 318 aa13.56□□□□□ -0.24
NEDD4-202ENST00000435532 TMEM54Q969K7 222 aa13.56□□□□□ -0.24
NEDD4-202ENST00000435532 CHCHD2Q9Y6H1 151 aaPredicted RBP13.56□□□□□ -0.24
NEDD4-202ENST00000435532 C4orf51C9J302 202 aa13.56□□□□□ -0.24
NEDD4-202ENST00000435532 NTN3O00634 580 aaPredicted RBP13.56□□□□□ -0.24
NEDD4-202ENST00000435532 GHITMQ9H3K2 345 aa13.56□□□□□ -0.24
NEDD4-202ENST00000435532 FGF12P61328 243 aa13.56□□□□□ -0.24
NEDD4-202ENST00000435532 PJVKQ0ZLH3 352 aa13.56□□□□□ -0.24
NEDD4-202ENST00000435532 CEBPEQ15744 281 aa13.56□□□□□ -0.24
NEDD4-202ENST00000435532 PRR27Q6MZM9 219 aa13.56□□□□□ -0.24
NEDD4-202ENST00000435532 C8orf82Q6P1X6 216 aaPredicted RBP13.56□□□□□ -0.24
NEDD4-202ENST00000435532 MS4A3Q96HJ5 214 aa13.56□□□□□ -0.24
NEDD4-202ENST00000435532 WDFY2Q96P53 400 aa13.56□□□□□ -0.24
NEDD4-202ENST00000435532 ASCL3Q9NQ33 180 aa13.56□□□□□ -0.24
NEDD4-202ENST00000435532 RALGAPA2Q2PPJ7 1873 aa13.55□□□□□ -0.24
NEDD4-202ENST00000435532 PRSS23O95084 383 aa13.55□□□□□ -0.24
NEDD4-202ENST00000435532 GZMMP51124 257 aa13.55□□□□□ -0.24
NEDD4-202ENST00000435532 H3F3AP84243 136 aa13.55□□□□□ -0.24
NEDD4-202ENST00000435532 TBR1Q16650 682 aa13.55□□□□□ -0.24
NEDD4-202ENST00000435532 BAP18Q8IXM2 172 aa13.55□□□□□ -0.24
NEDD4-202ENST00000435532 KLF14Q8TD94 323 aaPredicted RBP13.55□□□□□ -0.24
NEDD4-202ENST00000435532 ZNF716A6NP11 495 aa13.55□□□□□ -0.24
NEDD4-202ENST00000435532 SOCS1O15524 211 aa13.55□□□□□ -0.24
NEDD4-202ENST00000435532 SOX15O60248 233 aa13.55□□□□□ -0.24
NEDD4-202ENST00000435532 RECKO95980 971 aa13.55□□□□□ -0.24
NEDD4-202ENST00000435532 IGHMP01871 453 aa13.55□□□□□ -0.24
NEDD4-202ENST00000435532 FAM3AP98173 230 aa13.55□□□□□ -0.24
NEDD4-202ENST00000435532 CYB5R1Q9UHQ9 305 aa13.55□□□□□ -0.24
NEDD4-202ENST00000435532 HILPDAQ9Y5L2 63 aa13.55□□□□□ -0.24
NEDD4-202ENST00000435532 TTRP02766 147 aa13.55□□□□□ -0.24
NEDD4-202ENST00000435532 LIPFP07098 398 aa13.55□□□□□ -0.24
NEDD4-202ENST00000435532 ORM2P19652 201 aa13.55□□□□□ -0.24
NEDD4-202ENST00000435532 LOXL3P58215 753 aa13.55□□□□□ -0.24
NEDD4-202ENST00000435532 SSX7Q7RTT5 188 aa13.55□□□□□ -0.24
NEDD4-202ENST00000435532 TMED6Q8WW62 240 aa13.55□□□□□ -0.24
NEDD4-202ENST00000435532 IMMP1LQ96LU5 166 aa13.55□□□□□ -0.24
NEDD4-202ENST00000435532 OR51I2Q9H344 312 aa13.55□□□□□ -0.24
NEDD4-202ENST00000435532 PARP11Q9NR21 331 aa13.55□□□□□ -0.24
NEDD4-202ENST00000435532 KLK13Q9UKR3 277 aa13.55□□□□□ -0.24
NEDD4-202ENST00000435532 BCL2L11O43521 198 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 MAGEB1P43366 347 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 ZNF561Q8N587 486 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 APCDD1LQ8NCL9 501 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 OR52B4Q8NGK2 314 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 RPUSD4Q96CM3 377 aaKnown RBP13.54□□□□□ -0.24
NEDD4-202ENST00000435532 IGKV3D-11A0A0A0MRZ8 115 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 C9orf170A2RU37 121 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 CD1AP06126 327 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 MPV17P39210 176 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 PERPQ96FX8 193 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 IDI2-AS1Q9NZ38 188 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 FAM90A10PA6NDY2 464 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 FAM90A18PA6NE21 464 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 FAM90A16PA6NEW6 464 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 FAM90A20PA6NIJ5 464 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 FAM90A8PA6NJQ4 464 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 FAM90A7PA6NKC0 464 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 FAM90A22PA8MWA6 464 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 FAM90A12PA8MX19 464 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 FAM90A5PA8MXJ8 464 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 FAM90A23PA8MXZ1 464 aa13.54□□□□□ -0.24
NEDD4-202ENST00000435532 PPYP01298 95 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms