RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 VSTM2BA6NLU5 285 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 GJE1A6NN92 205 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 M0QZK8 103 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 GGCTO75223 188 aaKnown RBP6.5□□□□□ -1.37
CPSF6-202ENST00000435070 CTSDP07339 412 aaPredicted RBP6.5□□□□□ -1.37
CPSF6-202ENST00000435070 CHRNA7P36544 502 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 DPPA3Q6W0C5 159 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 ZNF321PQ8N8H1 164 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 S1PR5Q9H228 398 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 VSIRQ9H7M9 311 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 TDRD6O60522 2096 aaKnown RBP6.5□□□□□ -1.37
CPSF6-202ENST00000435070 ZNF407Q9C0G0 2248 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 LOC102723971A0A1B0GUV8 181 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 A0A1B0GW64 132 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 HELTA6NFD8 242 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 STAG3L2P0CL84 134 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 TNFSF4P23510 183 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 RBX1P62877 108 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 ZFP36L1Q07352 338 aaKnown RBP6.5□□□□□ -1.37
CPSF6-202ENST00000435070 GAGE1Q13065 139 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 TMEM187Q14656 261 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 TMEM52BQ4KMG9 183 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 DEGS2Q6QHC5 323 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 C17orf99Q6UX52 265 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 OR2D3Q8NGH3 330 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 OR1E3Q8WZA6 343 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 C1orf147Q96MC9 270 aaPredicted RBP6.5□□□□□ -1.37
CPSF6-202ENST00000435070 MTCH2Q9Y6C9 303 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 SHISA7A6NL88 538 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 B4DEV8 164 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 MAJINQ3KP22 176 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 WDFY1Q8IWB7 410 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 GBGT1Q8N5D6 347 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 OR10S1Q8NGN2 331 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 OR1N1Q8NGS0 311 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 NT5CQ8TCD5 201 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 FAM131CQ96AQ9 280 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 MRGPRX4Q96LA9 322 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 NXF5Q9H1B4 397 aaKnown RBP6.5□□□□□ -1.37
CPSF6-202ENST00000435070 TXNIPQ9H3M7 391 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 RPRMQ9NS64 109 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 ZNF319Q9P2F9 582 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 UBE2J1Q9Y385 318 aaPredicted RBP6.5□□□□□ -1.37
CPSF6-202ENST00000435070 UTS2O95399 124 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 OR10J1P30954 320 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 GABRA2P47869 451 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 POU3F1Q03052 451 aaPredicted RBP6.5□□□□□ -1.37
CPSF6-202ENST00000435070 IL13RA2Q14627 380 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 SHISA6Q6ZSJ9 500 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 PLXDC1Q8IUK5 500 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 PRSS50Q9UI38 385 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 CD207Q9UJ71 328 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 KIAA1549LQ6ZVL6 1849 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 BMPR1BO00238 502 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 FOXS1O43638 330 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 ISG15P05161 165 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 CDAP32320 146 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 HHEXQ03014 270 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 NSDHLQ15738 373 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 ABLIM2Q6H8Q1 611 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 C11orf40Q8WZ69 217 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 DAZAP1Q96EP5 407 aaKnown RBP6.5□□□□□ -1.37
CPSF6-202ENST00000435070 LYRM4Q9HD34 91 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 ZNF355PQ9NSJ1 428 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 P4HTMQ9NXG6 502 aa6.5□□□□□ -1.37
CPSF6-202ENST00000435070 PROB1E7EW31 1015 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 SRSF10O75494 262 aaKnown RBP6.49□□□□□ -1.37
CPSF6-202ENST00000435070 BMP5P22003 454 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 LIAT1Q6ZQX7 453 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 RBMXL1Q96E39 390 aaKnown RBP6.49□□□□□ -1.37
CPSF6-202ENST00000435070 DYNLRB1Q9NP97 96 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 RPH3ALQ9UNE2 315 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 WDR87Q6ZQQ6 2873 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 C5orf63A6NC05 138 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 SEMA4FO95754 770 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 HBE1P02100 147 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 PFN1P07737 140 aaKnown RBP6.49□□□□□ -1.37
CPSF6-202ENST00000435070 CISD3P0C7P0 127 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 GDF1P27539 372 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 RBPJQ06330 500 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 PRTGQ2VWP7 1150 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 SLC39A11Q8N1S5 342 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 OR5L2Q8NGL0 311 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 CITED1Q99966 193 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 GNB4Q9HAV0 340 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 FAM206AQ9NX38 181 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 MSTNO14793 375 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 MT-CO2P00403 227 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 BCL2P10415 239 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 FCGR2AP12318 317 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 BSXQ3C1V8 233 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 VWA1Q6PCB0 445 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 NAT6Q93015 286 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 RNF150Q9ULK6 438 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 PTRH2Q9Y3E5 179 aaKnown RBP6.49□□□□□ -1.37
CPSF6-202ENST00000435070 TRAV36DV7A0A075B6V5 113 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 TMEM265A0A087WTH1 108 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 LRRC3CA6NJW4 275 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 CCKARP32238 428 aa6.49□□□□□ -1.37
CPSF6-202ENST00000435070 CNN1P51911 297 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms