RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 CD63P08962 238 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 RND2P52198 227 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 PMS2P11Q13670 270 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 ICAM4Q14773 271 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 MPV17LQ2QL34 196 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 NCMAPQ5T1S8 102 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 RIPPLY2Q5TAB7 128 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 DHRS13Q6UX07 377 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 MEX3BQ6ZN04 569 aaKnown RBP12.73□□□□□ -0.37
DDX56-205ENST00000433257 ZFP62Q8NB50 900 aaPredicted RBP12.73□□□□□ -0.37
DDX56-205ENST00000433257 OR5C1Q8NGR4 320 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 CLDND2Q8NHS1 167 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 EDARADDQ8WWZ3 215 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 TP53RKQ96S44 253 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 PSMG3Q9BT73 122 aaPredicted RBP12.73□□□□□ -0.37
DDX56-205ENST00000433257 TMEM38BQ9NVV0 291 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 CISD1Q9NZ45 108 aaKnown RBP12.73□□□□□ -0.37
DDX56-205ENST00000433257 LOC102723971A0A1B0GUV8 181 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 hCG_38984A0A1B0GV85 526 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 ZNF724A8MTY0 619 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 CLDN34H7C241 214 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 OPN1MWP04001 364 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 OPN1MW2P0DN77 364 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 OPN1MW3P0DN78 364 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 LIFP15018 202 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 HIST1H1BP16401 226 aaKnown RBP12.73□□□□□ -0.37
DDX56-205ENST00000433257 ITGA3P26006 1051 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 CCL7P80098 99 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 PHYHD1Q5SRE7 291 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 ZNF385CQ66K41 422 aaPredicted RBP12.73□□□□□ -0.37
DDX56-205ENST00000433257 TBC1D26Q86UD7 250 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 FBXO17Q96EF6 278 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 SPSB2Q99619 263 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 RARRES2Q99969 163 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 PARD6GQ9BYG4 376 aaPredicted RBP12.73□□□□□ -0.37
DDX56-205ENST00000433257 PLK3Q9H4B4 646 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 UFSP2Q9NUQ7 469 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 FER1L5A0AVI2 2057 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 DCHS1Q96JQ0 3298 aa12.72□□□□□ -0.37
DDX56-205ENST00000433257 A0A1B0GU03 582 aa12.72□□□□□ -0.37
DDX56-205ENST00000433257 C5orf63A6NC05 138 aa12.72□□□□□ -0.37
DDX56-205ENST00000433257 TSTD3H0UI37 97 aa12.72□□□□□ -0.37
DDX56-205ENST00000433257 GPR37O15354 613 aa12.72□□□□□ -0.37
DDX56-205ENST00000433257 SSSCA1O60232 199 aa12.72□□□□□ -0.37
DDX56-205ENST00000433257 CBR3O75828 277 aa12.72□□□□□ -0.37
DDX56-205ENST00000433257 CYB5R3P00387 301 aaPredicted RBP12.72□□□□□ -0.37
DDX56-205ENST00000433257 ANOS1P23352 680 aa12.72□□□□□ -0.37
DDX56-205ENST00000433257 RAC3P60763 192 aa12.72□□□□□ -0.37
DDX56-205ENST00000433257 TGIF1Q15583 401 aa12.72□□□□□ -0.37
DDX56-205ENST00000433257 NMSQ5H8A3 153 aa12.72□□□□□ -0.37
DDX56-205ENST00000433257 RAET1LQ5VY80 246 aa12.72□□□□□ -0.37
DDX56-205ENST00000433257 PLCXD3Q63HM9 321 aa12.72□□□□□ -0.37
DDX56-205ENST00000433257 CLEC9AQ6UXN8 241 aa12.72□□□□□ -0.37
DDX56-205ENST00000433257 ZNF574Q6ZN55 896 aaPredicted RBP12.72□□□□□ -0.37
DDX56-205ENST00000433257 RNASE11Q8TAA1 199 aaKnown RBP12.72□□□□□ -0.37
DDX56-205ENST00000433257 Q8WTZ3 238 aa12.72□□□□□ -0.37
DDX56-205ENST00000433257 SLAMF9Q96A28 289 aa12.72□□□□□ -0.37
DDX56-205ENST00000433257 SPSB4Q96A44 273 aa12.72□□□□□ -0.37
DDX56-205ENST00000433257 ZNF385AQ96PM9 386 aaKnown RBP12.72□□□□□ -0.37
DDX56-205ENST00000433257 OR6C1Q96RD1 312 aa12.72□□□□□ -0.37
DDX56-205ENST00000433257 LIPGQ9Y5X9 500 aa12.72□□□□□ -0.37
DDX56-205ENST00000433257 CNOT1A5YKK6 2376 aaKnown RBP12.71□□□□□ -0.37
DDX56-205ENST00000433257 IGKV1-27A0A075B6S5 117 aa12.71□□□□□ -0.37
DDX56-205ENST00000433257 OPN1LWP04000 364 aa12.71□□□□□ -0.37
DDX56-205ENST00000433257 GNRHRP30968 328 aa12.71□□□□□ -0.37
DDX56-205ENST00000433257 NPBWR2P48146 333 aa12.71□□□□□ -0.37
DDX56-205ENST00000433257 DYNLT3P51808 116 aa12.71□□□□□ -0.37
DDX56-205ENST00000433257 PKIAP61925 76 aa12.71□□□□□ -0.37
DDX56-205ENST00000433257 SERF2P84101 59 aa12.71□□□□□ -0.37
DDX56-205ENST00000433257 RNPS1Q15287 305 aaKnown RBP12.71□□□□□ -0.37
DDX56-205ENST00000433257 TSPO2Q5TGU0 170 aa12.71□□□□□ -0.37
DDX56-205ENST00000433257 AKR7LQ8NHP1 331 aa12.71□□□□□ -0.37
DDX56-205ENST00000433257 SCGB1C1Q8TD33 95 aa12.71□□□□□ -0.37
DDX56-205ENST00000433257 PINX1Q96BK5 328 aaKnown RBP12.71□□□□□ -0.37
DDX56-205ENST00000433257 RCC1LQ96I51 464 aaKnown RBP12.71□□□□□ -0.37
DDX56-205ENST00000433257 PRDM14Q9GZV8 571 aa12.71□□□□□ -0.37
DDX56-205ENST00000433257 Q9N2K0 584 aa12.71□□□□□ -0.37
DDX56-205ENST00000433257 SPEGQ15772 3267 aa12.71□□□□□ -0.37
DDX56-205ENST00000433257 TRBV24-1A0A075B6N3 115 aa12.7□□□□□ -0.38
DDX56-205ENST00000433257 CDRT15L2A8MXV6 281 aa12.7□□□□□ -0.38
DDX56-205ENST00000433257 DBHP09172 617 aa12.7□□□□□ -0.38
DDX56-205ENST00000433257 SPIN3Q5JUX0 258 aa12.7□□□□□ -0.38
DDX56-205ENST00000433257 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.7□□□□□ -0.38
DDX56-205ENST00000433257 PPP1R3BQ86XI6 285 aa12.7□□□□□ -0.38
DDX56-205ENST00000433257 OR11L1Q8NGX0 322 aa12.7□□□□□ -0.38
DDX56-205ENST00000433257 OR5R1Q8NH85 324 aa12.7□□□□□ -0.38
DDX56-205ENST00000433257 OR2V1Q8NHB1 315 aa12.7□□□□□ -0.38
DDX56-205ENST00000433257 MBD3L1Q8WWY6 194 aa12.7□□□□□ -0.38
DDX56-205ENST00000433257 TRBV6-6A0A0A6YYG2 114 aa12.7□□□□□ -0.38
DDX56-205ENST00000433257 IGKV1-12A0A0C4DH73 117 aa12.7□□□□□ -0.38
DDX56-205ENST00000433257 A0A1W2PQM1 296 aa12.7□□□□□ -0.38
DDX56-205ENST00000433257 OR5H1A6NKK0 313 aa12.7□□□□□ -0.38
DDX56-205ENST00000433257 NTN3O00634 580 aaPredicted RBP12.7□□□□□ -0.38
DDX56-205ENST00000433257 CYB5BO43169 146 aa12.7□□□□□ -0.38
DDX56-205ENST00000433257 ADAM20O43506 726 aa12.7□□□□□ -0.38
DDX56-205ENST00000433257 HIST1H2BKO60814 126 aa12.7□□□□□ -0.38
DDX56-205ENST00000433257 TUSC2O75896 110 aa12.7□□□□□ -0.38
DDX56-205ENST00000433257 CNOT4O95628 575 aaKnown RBP12.7□□□□□ -0.38
DDX56-205ENST00000433257 MT-CO3P00414 261 aa12.7□□□□□ -0.38
DDX56-205ENST00000433257 IGKV1D-12P01611 117 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms