RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 HPCAP84074 193 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 ZNF616Q08AN1 781 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 ZBED5Q49AG3 693 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 TMEM97Q5BJF2 176 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 SFXN4Q6P4A7 337 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 SMARCD3Q6STE5 483 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 RASSF6Q6ZTQ3 369 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 MUC15Q8N387 334 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 ZFP41Q8N8Y5 198 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 ACOT4Q8N9L9 421 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 SLC37A2Q8TED4 501 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 EEF1AKMT1Q8WVE0 214 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 ARPC1AQ92747 370 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 GHSRQ92847 366 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 STMN2Q93045 179 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 DCPSQ96C86 337 aaKnown RBP1.9□□□□□ -2.11
CLK1-204ENST00000432425 PPCDCQ96CD2 204 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 RPUSD4Q96CM3 377 aaKnown RBP1.9□□□□□ -2.11
CLK1-204ENST00000432425 MRAP2Q96G30 205 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 SMARCD1Q96GM5 515 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 PGLYRP3Q96LB9 341 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 HSFY1Q96LI6 401 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 LINC00477Q96M19 166 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 OR2M2Q96R28 347 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 OR8B4Q96RC9 309 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 RASL11BQ9BPW5 248 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 CMSS1Q9BQ75 279 aaKnown RBP1.9□□□□□ -2.11
CLK1-204ENST00000432425 TCEAL7Q9BRU2 100 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 MND1Q9BWT6 205 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 TXNIPQ9H3M7 391 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 RNF167Q9H6Y7 350 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 SPANXB1Q9NS25 103 aaPredicted RBP1.9□□□□□ -2.11
CLK1-204ENST00000432425 AIG1Q9NVV5 245 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 DDIT4Q9NX09 232 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 RASL12Q9NYN1 266 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 PRO0628Q9UI54 55 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 JPT1Q9UK76 154 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 ANGPT4Q9Y264 503 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 ASF1AQ9Y294 204 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 TRAPPC4Q9Y296 219 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 NEUROG3Q9Y4Z2 214 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 RBM7Q9Y580 266 aaKnown RBP1.9□□□□□ -2.11
CLK1-204ENST00000432425 RAPGEF2Q9Y4G8 1499 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 KIF13BQ9NQT8 1826 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 ADAMTSL1Q8N6G6 1762 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 DICER1Q9UPY3 1922 aaKnown RBP1.89□□□□□ -2.11
CLK1-204ENST00000432425 PHLPP1O60346 1717 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 FOCADQ5VW36 1801 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 ZNF816-ZNF321PA0A0X1KG74 233 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 A0A1W2PRG6 482 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 NCBP2LA6PVI3 153 aaKnown RBP1.89□□□□□ -2.11
CLK1-204ENST00000432425 CEACAM18A8MTB9 384 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 FAM25AB3EWG3 89 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 FAM25CB3EWG5 89 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 FAM25GB3EWG6 89 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 SMKR1H3BMG3 65 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 CDC7O00311 574 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 TAAR5O14804 337 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 MRPS12O15235 138 aaKnown RBP1.89□□□□□ -2.11
CLK1-204ENST00000432425 MBTPS2O43462 519 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 ATG12O94817 140 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 IFNA4P05014 189 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 LGALS2P05162 132 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 RBMY1CP0DJD4 496 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 CDKN2BP42772 138 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 EIF2B2P49770 351 aaKnown RBP1.89□□□□□ -2.11
CLK1-204ENST00000432425 BIDP55957 195 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 MAXP61244 160 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 RHOBP62745 196 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 DYNLL1P63167 89 aaKnown RBP1.89□□□□□ -2.11
CLK1-204ENST00000432425 GTF2BQ00403 316 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 CDK5Q00535 292 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 SLC25A11Q02978 314 aaKnown RBP1.89□□□□□ -2.11
CLK1-204ENST00000432425 TCP10Q12799 353 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 EDDM3AQ14507 147 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 CDK10Q15131 360 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 PLPPR5Q32ZL2 321 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 TRMT12Q53H54 448 aaKnown RBP1.89□□□□□ -2.11
CLK1-204ENST00000432425 PYCR3Q53H96 274 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 TMEM128Q5BJH2 165 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 TNFAIP8L3Q5GJ75 292 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 CLEC12AQ5QGZ9 265 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 UBE2UQ5VVX9 321 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 OR10K2Q6IF99 312 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 TRIM40Q6P9F5 258 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 UBALD2Q8IYN6 164 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 LYPD1Q8N2G4 141 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 GATD1Q8NB37 220 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 OR4P4Q8NGL7 312 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 OR1L8Q8NGR8 309 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 OR2G2Q8NGZ5 317 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 OR8U1Q8NH10 309 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 RNF185Q96GF1 192 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 ZNF382Q96SR6 550 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 KLF6Q99612 283 aaPredicted RBP1.89□□□□□ -2.11
CLK1-204ENST00000432425 PDCD1LG2Q9BQ51 273 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 NRIP2Q9BQI9 281 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 MRPL45Q9BRJ2 306 aaKnown RBP1.89□□□□□ -2.11
CLK1-204ENST00000432425 GINS3Q9BRX5 216 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 RSPO3Q9BXY4 272 aaPredicted RBP1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms