RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 OR10P1Q8NGE3 313 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 OR10Z1Q8NGY1 313 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 WDFY2Q96P53 400 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 NDFIP1Q9BT67 221 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 F5H697 171 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 METTL15P1P0C7V9 234 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 BCL3P20749 454 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 CD40P25942 277 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 OR13C8Q8NGS7 320 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 RBPMSQ93062 196 aaKnown RBP11.19□□□□□ -0.62
PTCH1-207ENST00000429896 MARC2Q969Z3 335 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 CALCRP30988 508 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 APOBEC3AP31941 199 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-207ENST00000429896 SLC24A4Q8NFF2 622 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 CHST5Q9GZS9 411 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 TECTAO75443 2155 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 S100A4P26447 101 aaKnown RBP11.19□□□□□ -0.62
PTCH1-207ENST00000429896 CD276Q5ZPR3 534 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 MUC15Q8N387 334 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 BCL2L2Q92843 193 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-207ENST00000429896 CNTD2Q9H8S5 307 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 KCNIP2Q9NS61 270 aa11.19□□□□□ -0.62
PTCH1-207ENST00000429896 MRPS18AQ9NVS2 196 aaKnown RBP11.19□□□□□ -0.62
PTCH1-207ENST00000429896 OR4C45A6NMZ5 311 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 HAND1O96004 215 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 FGF9P31371 208 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-207ENST00000429896 BAK1Q16611 211 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 OR2T6Q8NHC8 308 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 IL18BPO95998 194 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 FABP1P07148 127 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 NRN1LQ496H8 165 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 OR4S1Q8NGB4 309 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 OR5M8Q8NGP6 311 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 SP6Q3SY56 376 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 DHRS7BQ6IAN0 325 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-207ENST00000429896 OR8G5Q8NG78 346 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 OR2V2Q96R30 315 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 LPAR2Q9HBW0 351 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 TMEM272A0A1B0GTI8 110 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 RAB19A4D1S5 217 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 ADAM11O75078 769 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 TTRP02766 147 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 KRTDAPP60985 99 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 BSPH1Q075Z2 132 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 RFESDQ8TAC1 157 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 M0QZ24 198 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 NCOR1O75376 2440 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 IGHG3P01860 377 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 C1QBP02746 253 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 CD80P33681 288 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 INSL4Q14641 139 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 ZNF787Q6DD87 383 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 DOLPP1Q86YN1 238 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 SEH1LQ96EE3 360 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 MAP6Q96JE9 813 aa11.18□□□□□ -0.62
PTCH1-207ENST00000429896 DFFBO76075 338 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 PRF1P14222 555 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 MST1P26927 711 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 GFRA1P56159 465 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 IGFBP7Q16270 282 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 FAM122BQ7Z309 247 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 OR13D1Q8NGV5 346 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 KLF14Q8TD94 323 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-207ENST00000429896 CD3DP04234 171 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 CRYBA2P53672 197 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 GAS1P54826 345 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 FAM209AQ5JX71 171 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 J3QW42 95 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 ZG16O60844 167 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 SCO1O75880 301 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 RHOBP62745 196 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 ZNF426Q9BUY5 554 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 OR6C3Q9NZP0 311 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 IGHV3OR15-7A0A075B7D8 119 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 TMEM200CA6NKL6 621 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 DNASE2O00115 360 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-207ENST00000429896 KLF4O43474 513 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 NAT2P11245 290 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 PTHLHP12272 177 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 GGNQ86UU5 652 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 STRAPQ9Y3F4 350 aaKnown RBP11.17□□□□□ -0.62
PTCH1-207ENST00000429896 AMMECR1Q9Y4X0 333 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-207ENST00000429896 ZNF727A8MUV8 499 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 SYNGR3O43761 229 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 PDLIM4P50479 330 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 PRRX1P54821 245 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 CEACAM21Q3KPI0 293 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 FBLIM1Q8WUP2 373 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 ZNF251Q9BRH9 671 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 CTDSP1Q9GZU7 261 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 CLN8Q9UBY8 286 aa11.17□□□□□ -0.62
PTCH1-207ENST00000429896 ST8SIA3O43173 380 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 OPRK1P41145 380 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 FABP9Q0Z7S8 132 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 ITLN1Q8WWA0 313 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 DLL4Q9NR61 685 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 CST7O76096 145 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 MT-ND4LP03901 98 aa11.16□□□□□ -0.62
PTCH1-207ENST00000429896 ROM1Q03395 351 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms