RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 CPNE4Q96A23 557 aaPredicted RBP7.5□□□□□ -1.21
GABPB1-205ENST00000429662 MALSU1Q96EH3 234 aa7.5□□□□□ -1.21
GABPB1-205ENST00000429662 GNPNAT1Q96EK6 184 aaPredicted RBP7.5□□□□□ -1.21
GABPB1-205ENST00000429662 AKR1E2Q96JD6 320 aa7.5□□□□□ -1.21
GABPB1-205ENST00000429662 JSRP1Q96MG2 331 aaPredicted RBP7.5□□□□□ -1.21
GABPB1-205ENST00000429662 TMEM56Q96MV1 263 aa7.5□□□□□ -1.21
GABPB1-205ENST00000429662 HDHD3Q9BSH5 251 aaPredicted RBP7.5□□□□□ -1.21
GABPB1-205ENST00000429662 ADAT1Q9BUB4 502 aaKnown RBP7.5□□□□□ -1.21
GABPB1-205ENST00000429662 C1QTNF5Q9BXJ0 243 aa7.5□□□□□ -1.21
GABPB1-205ENST00000429662 SRXN1Q9BYN0 137 aa7.5□□□□□ -1.21
GABPB1-205ENST00000429662 LINC00470Q9BZP3 86 aa7.5□□□□□ -1.21
GABPB1-205ENST00000429662 SLC35B3Q9H1N7 401 aa7.5□□□□□ -1.21
GABPB1-205ENST00000429662 OPA3Q9H6K4 179 aa7.5□□□□□ -1.21
GABPB1-205ENST00000429662 PLEKHF2Q9H8W4 249 aa7.5□□□□□ -1.21
GABPB1-205ENST00000429662 CRLF2Q9HC73 371 aa7.5□□□□□ -1.21
GABPB1-205ENST00000429662 KCNJ16Q9NPI9 418 aa7.5□□□□□ -1.21
GABPB1-205ENST00000429662 RPS10P5Q9NQ39 176 aa7.5□□□□□ -1.21
GABPB1-205ENST00000429662 HS3ST3B1Q9Y662 390 aa7.5□□□□□ -1.21
GABPB1-205ENST00000429662 TMEM56-RWDD3S4R434 201 aa7.5□□□□□ -1.21
GABPB1-205ENST00000429662 RP1P56715 2156 aa7.5□□□□□ -1.21
GABPB1-205ENST00000429662 PRRC2CQ9Y520 2896 aaKnown RBP7.5□□□□□ -1.21
GABPB1-205ENST00000429662 TACC2O95359 2948 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 HIVEP3Q5T1R4 2406 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 IGKV1-27A0A075B6S5 117 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 CCDC187A0A096LP49 1063 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 KIR2DS1A0A191URI9 304 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 C3orf85A0A1B0GTC6 90 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 LRP5LA4QPB2 252 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 NTN3O00634 580 aaPredicted RBP7.49□□□□□ -1.21
GABPB1-205ENST00000429662 GEMIN2O14893 280 aaKnown RBP7.49□□□□□ -1.21
GABPB1-205ENST00000429662 PHF1O43189 567 aaPredicted RBP7.49□□□□□ -1.21
GABPB1-205ENST00000429662 KLK10O43240 276 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 SPRY1O43609 319 aaPredicted RBP7.49□□□□□ -1.21
GABPB1-205ENST00000429662 CYTIPO60759 359 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 PITX3O75364 302 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 KLF7O75840 302 aaPredicted RBP7.49□□□□□ -1.21
GABPB1-205ENST00000429662 PPYP01298 95 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 PRH1P02810 166 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 TK1P04183 234 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 OR8U9P0C7N5 309 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 SMIM6P0DI80 62 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 NFYBP25208 207 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 LMO1P25800 156 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 OPRM1P35372 400 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 MAS1LP35410 378 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 RPL35P42766 123 aaKnown RBP7.49□□□□□ -1.21
GABPB1-205ENST00000429662 KIR2DS4P43632 304 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 PPT1P50897 306 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 RRADP55042 308 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 PSG4Q00888 419 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 ZFP36L1Q07352 338 aaKnown RBP7.49□□□□□ -1.21
GABPB1-205ENST00000429662 ZNF616Q08AN1 781 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 KIR2DS1Q14954 304 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 MPV17LQ2QL34 196 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.49□□□□□ -1.21
GABPB1-205ENST00000429662 LYZL2Q7Z4W2 148 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 ZNF695Q8IW36 515 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 OR2C3Q8N628 320 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 ZNF565Q8N9K5 539 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 OR8U1Q8NH10 309 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 OR14L1PQ8NHC6 308 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 ERGIC1Q969X5 290 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 C14orf79Q96F83 325 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 C12orf57Q99622 126 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 PAPOLGQ9BWT3 736 aaKnown RBP7.49□□□□□ -1.21
GABPB1-205ENST00000429662 SMIM3Q9BZL3 60 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 EIF5A2Q9GZV4 153 aaKnown RBP7.49□□□□□ -1.21
GABPB1-205ENST00000429662 TMEM222Q9H0R3 208 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 WNT5BQ9H1J7 359 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 HIPK2Q9H2X6 1198 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 PLK3Q9H4B4 646 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 ZNF442Q9H7R0 627 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 SPACA1Q9HBV2 294 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 GPR35Q9HC97 309 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 RCL1Q9Y2P8 373 aaKnown RBP7.49□□□□□ -1.21
GABPB1-205ENST00000429662 FER1L5A0AVI2 2057 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 SEC16AO15027 2179 aa7.49□□□□□ -1.21
GABPB1-205ENST00000429662 IGKV1-12A0A0C4DH73 117 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 C7orf77A4D0Y5 90 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 B4E171 279 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 MSTNO14793 375 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 AGPAT2O15120 278 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 IGKV1D-12P01611 117 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 HBE1P02100 147 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 WNT2P09544 360 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 RNF224P0DH78 156 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 AGAP20933 346 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 AADACP22760 399 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 ACP1P24666 158 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 TSPAN7P41732 249 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 NKX2-1P43699 371 aaPredicted RBP7.48□□□□□ -1.21
GABPB1-205ENST00000429662 FXYD4P59646 89 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 B2MP61769 119 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 VAMP2P63027 116 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 EWSR1Q01844 656 aaKnown RBP eCLIP7.48□□□□□ -1.21
GABPB1-205ENST00000429662 SRSF6Q13247 344 aaKnown RBP7.48□□□□□ -1.21
GABPB1-205ENST00000429662 CLN3Q13286 438 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 CLINT1Q14677 625 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 OR8G1Q15617 311 aa7.48□□□□□ -1.21
GABPB1-205ENST00000429662 CEACAM16Q2WEN9 425 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms